RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	BTAF1	O14981	1849 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	PSD	A5PKW4	1024 aa	Predicted RBP	10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	PTCD1	O75127	700 aa	Known RBP	10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	KCNQ4	P56696	695 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	SLC39A6	Q13433	755 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	DCTN1	Q14203	1278 aa		10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	DIEXF	Q68CQ4	756 aa	Known RBP	10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.19	□□□□□ -0.78
MS4A6A-208	ENST00000528851	SLC4A9	Q96Q91	983 aa		10.18	□□□□□ -0.78
MS4A6A-208	ENST00000528851	TFCP2L1	Q9NZI6	479 aa		10.18	□□□□□ -0.78
MS4A6A-208	ENST00000528851	EP400	Q96L91	3159 aa		10.18	□□□□□ -0.78
MS4A6A-208	ENST00000528851	SPDYE4	A6NLX3	237 aa		10.17	□□□□□ -0.78
MS4A6A-208	ENST00000528851	ITPK1	Q13572	414 aa		10.17	□□□□□ -0.78
MS4A6A-208	ENST00000528851	SLC16A10	Q8TF71	515 aa		10.17	□□□□□ -0.78
MS4A6A-208	ENST00000528851	MRC1	P22897	1456 aa		10.17	□□□□□ -0.78
MS4A6A-208	ENST00000528851	TOGARAM1	Q9Y4F4	1720 aa		10.17	□□□□□ -0.78
MS4A6A-208	ENST00000528851	APAF1	O14727	1248 aa		10.17	□□□□□ -0.78
MS4A6A-208	ENST00000528851	NEUROD2	Q15784	382 aa		10.17	□□□□□ -0.78
MS4A6A-208	ENST00000528851	ZNF827	Q17R98	1081 aa		10.17	□□□□□ -0.78
MS4A6A-208	ENST00000528851	FMNL2	Q96PY5	1086 aa		10.17	□□□□□ -0.78
MS4A6A-208	ENST00000528851	TRIM35	Q9UPQ4	493 aa		10.17	□□□□□ -0.78
MS4A6A-208	ENST00000528851	RREB1	Q92766	1687 aa		10.16	□□□□□ -0.78
MS4A6A-208	ENST00000528851	ADAMTS7	Q9UKP4	1686 aa		10.16	□□□□□ -0.78
MS4A6A-208	ENST00000528851	ITGB4	P16144	1822 aa		10.16	□□□□□ -0.78
MS4A6A-208	ENST00000528851	NGEF	Q8N5V2	710 aa		10.16	□□□□□ -0.78
MS4A6A-208	ENST00000528851	LINC00116	Q8NCU8	138 aa		10.16	□□□□□ -0.78
MS4A6A-208	ENST00000528851	AK7	Q96M32	723 aa		10.16	□□□□□ -0.78
MS4A6A-208	ENST00000528851	RRP7A	Q9Y3A4	280 aa	Known RBP	10.16	□□□□□ -0.78
MS4A6A-208	ENST00000528851	RPS6KA4	O75676	772 aa		10.15	□□□□□ -0.78
MS4A6A-208	ENST00000528851	CALD1	Q05682	793 aa	Known RBP	10.15	□□□□□ -0.78
MS4A6A-208	ENST00000528851	CCDC27	Q2M243	656 aa		10.15	□□□□□ -0.78
MS4A6A-208	ENST00000528851	FAM9B	Q8IZU0	186 aa		10.15	□□□□□ -0.78
MS4A6A-208	ENST00000528851	ZNF496	Q96IT1	587 aa	Predicted RBP	10.15	□□□□□ -0.78
MS4A6A-208	ENST00000528851	SCN11A	Q9UI33	1791 aa		10.15	□□□□□ -0.79
MS4A6A-208	ENST00000528851	CNTNAP4	Q9C0A0	1308 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	STARD3NL	O95772	234 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	CYP19A1	P11511	503 aa	Predicted RBP	10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	SSFA2	P28290	1259 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	DNAJC10	Q8IXB1	793 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	LY75	O60449	1722 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	HEG1	Q9ULI3	1381 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	PNPLA7	Q6ZV29	1317 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	CHL1	O00533	1208 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	KCNQ3	O43525	872 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	SNRPA1	P09661	255 aa	Known RBP	10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	TRAPPC3L	Q5T215	181 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	SPON1	Q9HCB6	807 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	RTCB	Q9Y3I0	505 aa	Known RBP	10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	NUP188	Q5SRE5	1749 aa		10.14	□□□□□ -0.79
MS4A6A-208	ENST00000528851	INTS5	Q6P9B9	1019 aa	Known RBP	10.13	□□□□□ -0.79
MS4A6A-208	ENST00000528851	COL23A1	Q86Y22	540 aa	Predicted RBP	10.13	□□□□□ -0.79
MS4A6A-208	ENST00000528851	CFAP44	Q96MT7	982 aa		10.13	□□□□□ -0.79
MS4A6A-208	ENST00000528851	THUMPD2	Q9BTF0	503 aa	Known RBP	10.13	□□□□□ -0.79
MS4A6A-208	ENST00000528851	MTFR1L	Q9H019	292 aa		10.13	□□□□□ -0.79
MS4A6A-208	ENST00000528851	MIS18A	Q9NYP9	233 aa		10.13	□□□□□ -0.79
MS4A6A-208	ENST00000528851	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.12	□□□□□ -0.79
MS4A6A-208	ENST00000528851	CRKL	P46109	303 aa	Known RBP	10.12	□□□□□ -0.79
MS4A6A-208	ENST00000528851	ATN1	P54259	1190 aa	Predicted RBP	10.12	□□□□□ -0.79
MS4A6A-208	ENST00000528851	EIF4A1	P60842	406 aa	Known RBP	10.12	□□□□□ -0.79
MS4A6A-208	ENST00000528851	CCDC87	Q9NVE4	849 aa		10.12	□□□□□ -0.79
MS4A6A-208	ENST00000528851	TSPYL4	Q9UJ04	414 aa		10.12	□□□□□ -0.79
MS4A6A-208	ENST00000528851	GNPAT	O15228	680 aa		10.12	□□□□□ -0.79
MS4A6A-208	ENST00000528851	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.12	□□□□□ -0.79
MS4A6A-208	ENST00000528851	USP16	Q9Y5T5	823 aa		10.12	□□□□□ -0.79
MS4A6A-208	ENST00000528851	PAPPA	Q13219	1627 aa		10.11	□□□□□ -0.79
MS4A6A-208	ENST00000528851	ZNF831	Q5JPB2	1677 aa		10.11	□□□□□ -0.79
MS4A6A-208	ENST00000528851	ZNF853	P0CG23	659 aa		10.11	□□□□□ -0.79
MS4A6A-208	ENST00000528851	GNAI1	P63096	354 aa		10.11	□□□□□ -0.79
MS4A6A-208	ENST00000528851	MIER1	Q8N108	512 aa		10.11	□□□□□ -0.79
MS4A6A-208	ENST00000528851		A0A087WZG4	1122 aa		10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	GIGYF1	O75420	1035 aa	Predicted RBP	10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	WDR63	Q8IWG1	891 aa		10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	WWC1	Q8IX03	1113 aa		10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	ARHGEF1	Q92888	912 aa	Known RBP	10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	IFT57	Q9NWB7	429 aa		10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	KCP	Q6ZWJ8	1503 aa		10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	ZBTB7A	O95365	584 aa		10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	RFC4	P35249	363 aa		10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	IL6ST	P40189	918 aa	Predicted RBP	10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	LAS1L	Q9Y4W2	734 aa	Known RBP	10.1	□□□□□ -0.79
MS4A6A-208	ENST00000528851	PHF14	O94880	888 aa		10.09	□□□□□ -0.79
MS4A6A-208	ENST00000528851	EIF5	P55010	431 aa	Known RBP	10.09	□□□□□ -0.79
MS4A6A-208	ENST00000528851	NPM2	Q86SE8	214 aa	Known RBP	10.09	□□□□□ -0.79
MS4A6A-208	ENST00000528851	NLGN1	Q8N2Q7	840 aa		10.09	□□□□□ -0.79
MS4A6A-208	ENST00000528851	IL16	Q14005	1332 aa		10.08	□□□□□ -0.8
MS4A6A-208	ENST00000528851	A1BG	P04217	495 aa		10.08	□□□□□ -0.8
MS4A6A-208	ENST00000528851	CANX	P27824	592 aa	Known RBP	10.08	□□□□□ -0.8
MS4A6A-208	ENST00000528851	POLD1	P28340	1107 aa		10.08	□□□□□ -0.8
MS4A6A-208	ENST00000528851	AMIGO3	Q86WK7	504 aa		10.08	□□□□□ -0.8
MS4A6A-208	ENST00000528851	CHMP4A	Q9BY43	222 aa		10.08	□□□□□ -0.8
MS4A6A-208	ENST00000528851	C4B	P0C0L5	1744 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	HOXB7	P09629	217 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	TIE1	P35590	1138 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	PTGER2	P43116	358 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	SGIP1	Q9BQI5	828 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	NARF	Q9UHQ1	456 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	ZBTB1	Q9Y2K1	713 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	SOS1	Q07889	1333 aa	Predicted RBP	10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	PRAMEF22	A3QJZ6	481 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 8 ms