RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 SRGAP3O43295 1099 aa22.93■■□□□ 1.26
TM9SF1-206ENST00000528669 EIF4A1P60842 406 aaKnown RBP22.93■■□□□ 1.26
TM9SF1-206ENST00000528669 ANAPC15P60006 121 aa22.93■■□□□ 1.26
TM9SF1-206ENST00000528669 NSFL1CQ9UNZ2 370 aaKnown RBP22.93■■□□□ 1.26
TM9SF1-206ENST00000528669 CEMIPQ8WUJ3 1361 aa22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 PLEKHG5O94827 1062 aa22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 CUL4AQ13619 759 aa22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 RHPN1Q8TCX5 695 aa22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 IP6K1Q92551 441 aa22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 PPP1R9BQ96SB3 815 aa22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 USP54Q70EL1 1684 aa22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 PI4KAP2A4QPH2 592 aa22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 POLA2Q14181 598 aa22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 PI4KAP1Q8N8J0 262 aa22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 ANP32BQ92688 251 aaKnown RBP22.92■■□□□ 1.26
TM9SF1-206ENST00000528669 PRIM1P49642 420 aaKnown RBP22.91■■□□□ 1.26
TM9SF1-206ENST00000528669 RBSNQ9H1K0 784 aa22.91■■□□□ 1.26
TM9SF1-206ENST00000528669 AOX1Q06278 1338 aa22.91■■□□□ 1.26
TM9SF1-206ENST00000528669 RAB11FIP3O75154 756 aa22.91■■□□□ 1.26
TM9SF1-206ENST00000528669 PI4K2BQ8TCG2 481 aa22.9■■□□□ 1.26
TM9SF1-206ENST00000528669 LRRC59Q96AG4 307 aaKnown RBP22.9■■□□□ 1.26
TM9SF1-206ENST00000528669 BRD1O95696 1058 aa22.9■■□□□ 1.26
TM9SF1-206ENST00000528669 TMEM63CQ9P1W3 806 aa22.9■■□□□ 1.26
TM9SF1-206ENST00000528669 BEND3Q5T5X7 828 aa22.89■■□□□ 1.26
TM9SF1-206ENST00000528669 DNAAF4Q8WXU2 420 aa22.89■■□□□ 1.26
TM9SF1-206ENST00000528669 FOXD4L6Q3SYB3 417 aaPredicted RBP22.88■■□□□ 1.25
TM9SF1-206ENST00000528669 FOXD4L3Q6VB84 417 aaPredicted RBP22.88■■□□□ 1.25
TM9SF1-206ENST00000528669 MPRIPQ6WCQ1 1025 aa22.88■■□□□ 1.25
TM9SF1-206ENST00000528669 RGPD2P0DJD1 1756 aa22.88■■□□□ 1.25
TM9SF1-206ENST00000528669 KIF1BPQ96EK5 621 aa22.88■■□□□ 1.25
TM9SF1-206ENST00000528669 HSPA4P34932 840 aa22.87■■□□□ 1.25
TM9SF1-206ENST00000528669 BTBD11A6QL63 1104 aa22.87■■□□□ 1.25
TM9SF1-206ENST00000528669 TEFQ10587 303 aa22.87■■□□□ 1.25
TM9SF1-206ENST00000528669 ZNF530Q6P9A1 599 aaPredicted RBP22.87■■□□□ 1.25
TM9SF1-206ENST00000528669 INTS4Q96HW7 963 aaKnown RBP22.87■■□□□ 1.25
TM9SF1-206ENST00000528669 SYCE3A1L190 88 aa22.86■■□□□ 1.25
TM9SF1-206ENST00000528669 PSME1Q06323 249 aa22.86■■□□□ 1.25
TM9SF1-206ENST00000528669 ESCO1Q5FWF5 840 aa22.86■■□□□ 1.25
TM9SF1-206ENST00000528669 NFAT5O94916 1531 aa22.85■■□□□ 1.25
TM9SF1-206ENST00000528669 MED1Q15648 1581 aaPredicted RBP22.85■■□□□ 1.25
TM9SF1-206ENST00000528669 KDM3BQ7LBC6 1761 aa22.85■■□□□ 1.25
TM9SF1-206ENST00000528669 IL17RAQ96F46 866 aa22.84■■□□□ 1.25
TM9SF1-206ENST00000528669 SGSM2O43147 1006 aa22.84■■□□□ 1.25
TM9SF1-206ENST00000528669 ADCY9O60503 1353 aa22.84■■□□□ 1.25
TM9SF1-206ENST00000528669 OS9Q13438 667 aaPredicted RBP22.83■■□□□ 1.25
TM9SF1-206ENST00000528669 HOXB7P09629 217 aa22.83■■□□□ 1.25
TM9SF1-206ENST00000528669 CWC27Q6UX04 472 aaKnown RBP22.83■■□□□ 1.25
TM9SF1-206ENST00000528669 CNTROBQ8N137 903 aa22.83■■□□□ 1.25
TM9SF1-206ENST00000528669 AKAP4Q5JQC9 854 aa22.82■■□□□ 1.24
TM9SF1-206ENST00000528669 LRSAM1Q6UWE0 723 aa22.82■■□□□ 1.24
TM9SF1-206ENST00000528669 LARP6Q9BRS8 491 aaKnown RBP22.82■■□□□ 1.24
TM9SF1-206ENST00000528669 GDPD2Q9HCC8 539 aa22.82■■□□□ 1.24
TM9SF1-206ENST00000528669 RAD50Q92878 1312 aa22.82■■□□□ 1.24
TM9SF1-206ENST00000528669 SNX14Q9Y5W7 946 aa22.82■■□□□ 1.24
TM9SF1-206ENST00000528669 SPG7Q9UQ90 795 aa22.81■■□□□ 1.24
TM9SF1-206ENST00000528669 XPCQ01831 940 aaPredicted RBP22.81■■□□□ 1.24
TM9SF1-206ENST00000528669 LSG1Q9H089 658 aaKnown RBP22.81■■□□□ 1.24
TM9SF1-206ENST00000528669 MBD3O95983 291 aa22.8■■□□□ 1.24
TM9SF1-206ENST00000528669 PROSER3Q2NL68 480 aa22.8■■□□□ 1.24
TM9SF1-206ENST00000528669 PLEKHO1Q53GL0 409 aaPredicted RBP22.8■■□□□ 1.24
TM9SF1-206ENST00000528669 ZSCAN30Q86W11 494 aa22.8■■□□□ 1.24
TM9SF1-206ENST00000528669 RASEFQ8IZ41 740 aa22.8■■□□□ 1.24
TM9SF1-206ENST00000528669 MAP3K2Q9Y2U5 619 aa22.8■■□□□ 1.24
TM9SF1-206ENST00000528669 PRAMEF22A3QJZ6 481 aa22.79■■□□□ 1.24
TM9SF1-206ENST00000528669 KCNH5Q8NCM2 988 aa22.79■■□□□ 1.24
TM9SF1-206ENST00000528669 EPB41L2O43491 1005 aaKnown RBP22.79■■□□□ 1.24
TM9SF1-206ENST00000528669 DBF4Q9UBU7 674 aaPredicted RBP22.79■■□□□ 1.24
TM9SF1-206ENST00000528669 PA2G4Q9UQ80 394 aaKnown RBP22.79■■□□□ 1.24
TM9SF1-206ENST00000528669 PXDNQ92626 1479 aa22.78■■□□□ 1.24
TM9SF1-206ENST00000528669 RNMTO43148 476 aaKnown RBP22.78■■□□□ 1.24
TM9SF1-206ENST00000528669 HSP90AB4PQ58FF6 505 aa22.78■■□□□ 1.24
TM9SF1-206ENST00000528669 C9orf78Q9NZ63 289 aaPredicted RBP22.78■■□□□ 1.24
TM9SF1-206ENST00000528669 CHD2O14647 1828 aaKnown RBP22.78■■□□□ 1.24
TM9SF1-206ENST00000528669 LMO7Q8WWI1 1683 aa22.78■■□□□ 1.24
TM9SF1-206ENST00000528669 GADD45BO75293 160 aaPredicted RBP22.78■■□□□ 1.24
TM9SF1-206ENST00000528669 KIAA1211Q6ZU35 1233 aa22.78■■□□□ 1.24
TM9SF1-206ENST00000528669 TCHHQ07283 1943 aa22.77■■□□□ 1.24
TM9SF1-206ENST00000528669 AK2P54819 239 aa22.77■■□□□ 1.24
TM9SF1-206ENST00000528669 CWF19L2Q2TBE0 894 aaKnown RBP22.77■■□□□ 1.24
TM9SF1-206ENST00000528669 C1orf141Q5JVX7 400 aa22.77■■□□□ 1.24
TM9SF1-206ENST00000528669 RNF214Q8ND24 703 aa22.77■■□□□ 1.24
TM9SF1-206ENST00000528669 CPA1P15085 419 aa22.77■■□□□ 1.24
TM9SF1-206ENST00000528669 LMOD2Q6P5Q4 547 aa22.77■■□□□ 1.24
TM9SF1-206ENST00000528669 TTC14Q96N46 770 aa22.76■■□□□ 1.23
TM9SF1-206ENST00000528669 CHMP4AQ9BY43 222 aa22.76■■□□□ 1.23
TM9SF1-206ENST00000528669 WDR33Q9C0J8 1336 aaKnown RBP22.76■■□□□ 1.23
TM9SF1-206ENST00000528669 GLRX3O76003 335 aaKnown RBP22.76■■□□□ 1.23
TM9SF1-206ENST00000528669 MSNP26038 577 aaKnown RBP22.76■■□□□ 1.23
TM9SF1-206ENST00000528669 CLASRPQ8N2M8 674 aaKnown RBP22.76■■□□□ 1.23
TM9SF1-206ENST00000528669 RPAP1Q9BWH6 1393 aaPredicted RBP22.75■■□□□ 1.23
TM9SF1-206ENST00000528669 GIGYF1O75420 1035 aaPredicted RBP22.75■■□□□ 1.23
TM9SF1-206ENST00000528669 USP48Q86UV5 1035 aa22.75■■□□□ 1.23
TM9SF1-206ENST00000528669 ANKLE2Q86XL3 938 aa22.75■■□□□ 1.23
TM9SF1-206ENST00000528669 PDLIM2Q96JY6 352 aa22.75■■□□□ 1.23
TM9SF1-206ENST00000528669 DIAPH3Q9NSV4 1193 aa22.75■■□□□ 1.23
TM9SF1-206ENST00000528669 GCP02774 474 aa22.74■■□□□ 1.23
TM9SF1-206ENST00000528669 RUFY3Q7L099 469 aa22.74■■□□□ 1.23
TM9SF1-206ENST00000528669 TTC41PQ6P2S7 1318 aa22.74■■□□□ 1.23
TM9SF1-206ENST00000528669 USP42Q9H9J4 1324 aaKnown RBP22.74■■□□□ 1.23
TM9SF1-206ENST00000528669 TPRNQ4KMQ1 711 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms