RNA–Protein interactions for RNA: ENST00000528427.1

GTF2H1-209, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-209ENST00000528427 C1orf229Q6ZS94 237 aaPredicted RBP9.65□□□□□ -0.86
GTF2H1-209ENST00000528427 WWC1Q8IX03 1113 aa9.65□□□□□ -0.86
GTF2H1-209ENST00000528427 C1orf216Q8TAB5 229 aa9.65□□□□□ -0.86
GTF2H1-209ENST00000528427 NOD1Q9Y239 953 aa9.65□□□□□ -0.86
GTF2H1-209ENST00000528427 EIF4G1Q04637 1599 aaKnown RBP9.65□□□□□ -0.86
GTF2H1-209ENST00000528427 A6NJR5 290 aa9.64□□□□□ -0.87
GTF2H1-209ENST00000528427 USP17L5A8MUK1 530 aa9.64□□□□□ -0.87
GTF2H1-209ENST00000528427 HCN2Q9UL51 889 aa9.64□□□□□ -0.87
GTF2H1-209ENST00000528427 CECR2Q9BXF3 1484 aa9.64□□□□□ -0.87
GTF2H1-209ENST00000528427 SHISA8B8ZZ34 492 aa9.63□□□□□ -0.87
GTF2H1-209ENST00000528427 DEPDC4Q8N2C3 294 aa9.63□□□□□ -0.87
GTF2H1-209ENST00000528427 UCN2Q96RP3 112 aa9.63□□□□□ -0.87
GTF2H1-209ENST00000528427 ZNF358Q9NW07 568 aa9.63□□□□□ -0.87
GTF2H1-209ENST00000528427 DNMT3AQ9Y6K1 912 aaPredicted RBP9.63□□□□□ -0.87
GTF2H1-209ENST00000528427 FGFR3P22607 806 aa9.62□□□□□ -0.87
GTF2H1-209ENST00000528427 CTBSQ01459 385 aa9.62□□□□□ -0.87
GTF2H1-209ENST00000528427 NLRP8Q86W28 1048 aa9.62□□□□□ -0.87
GTF2H1-209ENST00000528427 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.62□□□□□ -0.87
GTF2H1-209ENST00000528427 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
GTF2H1-209ENST00000528427 AIDAQ96BJ3 306 aa9.62□□□□□ -0.87
GTF2H1-209ENST00000528427 ZCCHC2Q9C0B9 1178 aaKnown RBP9.62□□□□□ -0.87
GTF2H1-209ENST00000528427 EPHA4P54764 986 aa9.61□□□□□ -0.87
GTF2H1-209ENST00000528427 FOXK2Q01167 660 aa9.61□□□□□ -0.87
GTF2H1-209ENST00000528427 SCHIP1Q9P0W5 487 aaPredicted RBP9.61□□□□□ -0.87
GTF2H1-209ENST00000528427 SMARCA2P51531 1590 aa9.61□□□□□ -0.87
GTF2H1-209ENST00000528427 MROH2BQ7Z745 1585 aa9.6□□□□□ -0.87
GTF2H1-209ENST00000528427 PEG3Q9GZU2 1588 aa9.6□□□□□ -0.87
GTF2H1-209ENST00000528427 RSF1Q96T23 1441 aaPredicted RBP9.6□□□□□ -0.87
GTF2H1-209ENST00000528427 BMP4P12644 408 aa9.6□□□□□ -0.87
GTF2H1-209ENST00000528427 FIGNL1Q6PIW4 674 aa9.6□□□□□ -0.87
GTF2H1-209ENST00000528427 PLEKHM2Q8IWE5 1019 aa9.6□□□□□ -0.87
GTF2H1-209ENST00000528427 ZDHHC1Q8WTX9 485 aa9.6□□□□□ -0.87
GTF2H1-209ENST00000528427 ZDHHC3Q9NYG2 299 aa9.6□□□□□ -0.87
GTF2H1-209ENST00000528427 PCDHGC4Q9Y5F7 938 aa9.6□□□□□ -0.87
GTF2H1-209ENST00000528427 A0A1W2PNR3 127 aa9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 BACH1O14867 736 aa9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 ZBTB7BO15156 539 aaPredicted RBP9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 NBPF1Q3BBV0 1214 aa9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 BEND7Q8N7W2 519 aaPredicted RBP9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 GALNT6Q8NCL4 622 aa9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 ZIC5Q96T25 663 aa9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 CABP1Q9NZU7 370 aa9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 GDF2Q9UK05 429 aaPredicted RBP9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 KIAA1024Q9UPX6 916 aa9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 PARP3Q9Y6F1 533 aa9.59□□□□□ -0.87
GTF2H1-209ENST00000528427 PHF20L1A8MW92 1017 aa9.58□□□□□ -0.88
GTF2H1-209ENST00000528427 ATXN7O15265 892 aaPredicted RBP9.58□□□□□ -0.88
GTF2H1-209ENST00000528427 SNRPNP63162 240 aaKnown RBP9.58□□□□□ -0.88
GTF2H1-209ENST00000528427 FNBP4Q8N3X1 1017 aaPredicted RBP9.58□□□□□ -0.88
GTF2H1-209ENST00000528427 GOLGA6L1Q8N7Z2 621 aa9.58□□□□□ -0.88
GTF2H1-209ENST00000528427 USP17L3A6NCW0 530 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 USP17L4A6NCW7 530 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 HOXB4P17483 251 aaPredicted RBP9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 TXLNAP40222 546 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 CLDN10P78369 228 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 TNP2Q05952 138 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 PSME1Q06323 249 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 USP17L2Q6R6M4 530 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 USP17L1Q7RTZ2 530 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 PROSER2Q86WR7 435 aaPredicted RBP9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 EDARADDQ8WWZ3 215 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 DCAF5Q96JK2 942 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 ZMYND15Q9H091 742 aa9.57□□□□□ -0.88
GTF2H1-209ENST00000528427 ATP9BO43861 1147 aa9.56□□□□□ -0.88
GTF2H1-209ENST00000528427 ITGB2P05107 769 aa9.56□□□□□ -0.88
GTF2H1-209ENST00000528427 MAPTP10636 758 aaKnown RBP9.56□□□□□ -0.88
GTF2H1-209ENST00000528427 TATP17735 454 aaPredicted RBP9.56□□□□□ -0.88
GTF2H1-209ENST00000528427 ARSJQ5FYB0 599 aaPredicted RBP9.56□□□□□ -0.88
GTF2H1-209ENST00000528427 SLCO4C1Q6ZQN7 724 aa9.56□□□□□ -0.88
GTF2H1-209ENST00000528427 PODNQ7Z5L7 613 aa9.56□□□□□ -0.88
GTF2H1-209ENST00000528427 CLUAP1Q96AJ1 413 aa9.56□□□□□ -0.88
GTF2H1-209ENST00000528427 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
GTF2H1-209ENST00000528427 DCDC2BA2VCK2 349 aa9.55□□□□□ -0.88
GTF2H1-209ENST00000528427 ARAFP10398 606 aa9.55□□□□□ -0.88
GTF2H1-209ENST00000528427 TEAD4Q15561 434 aa9.55□□□□□ -0.88
GTF2H1-209ENST00000528427 GPAT2Q6NUI2 795 aa9.55□□□□□ -0.88
GTF2H1-209ENST00000528427 TRIM50Q86XT4 487 aa9.55□□□□□ -0.88
GTF2H1-209ENST00000528427 TNS4Q8IZW8 715 aa9.55□□□□□ -0.88
GTF2H1-209ENST00000528427 TBCELQ5QJ74 424 aa9.54□□□□□ -0.88
GTF2H1-209ENST00000528427 FAM182BQ5T319 152 aa9.54□□□□□ -0.88
GTF2H1-209ENST00000528427 SAMD5Q5TGI4 173 aa9.54□□□□□ -0.88
GTF2H1-209ENST00000528427 SLC9A9Q8IVB4 645 aa9.54□□□□□ -0.88
GTF2H1-209ENST00000528427 TPCN2Q8NHX9 752 aa9.54□□□□□ -0.88
GTF2H1-209ENST00000528427 C7orf43Q8WVR3 580 aa9.54□□□□□ -0.88
GTF2H1-209ENST00000528427 L3MBTL2Q969R5 705 aa9.54□□□□□ -0.88
GTF2H1-209ENST00000528427 ATAD2BQ9ULI0 1458 aa9.53□□□□□ -0.88
GTF2H1-209ENST00000528427 CC2D2AQ9P2K1 1620 aa9.53□□□□□ -0.88
GTF2H1-209ENST00000528427 EML1O00423 815 aa9.53□□□□□ -0.88
GTF2H1-209ENST00000528427 DKK1O94907 266 aa9.53□□□□□ -0.88
GTF2H1-209ENST00000528427 FAM157BP0CG42 384 aa9.53□□□□□ -0.88
GTF2H1-209ENST00000528427 CD33P20138 364 aa9.53□□□□□ -0.88
GTF2H1-209ENST00000528427 NOS2P35228 1153 aa9.53□□□□□ -0.88
GTF2H1-209ENST00000528427 KLF15Q9UIH9 416 aa9.53□□□□□ -0.88
GTF2H1-209ENST00000528427 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
GTF2H1-209ENST00000528427 NCAPD3P42695 1498 aa9.53□□□□□ -0.88
GTF2H1-209ENST00000528427 HMGXB3Q12766 1538 aa9.52□□□□□ -0.88
GTF2H1-209ENST00000528427 KHNYNO15037 678 aaKnown RBP9.52□□□□□ -0.89
GTF2H1-209ENST00000528427 EFSO43281 561 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms