RNA–Protein interactions for RNA: ENST00000528284.1

PPFIA1-210, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-210ENST00000528284 COL15A1P39059 1388 aa23.05■■□□□ 1.28
PPFIA1-210ENST00000528284 BTBD11A6QL63 1104 aa23.05■■□□□ 1.28
PPFIA1-210ENST00000528284 DDR1Q08345 913 aa23.05■■□□□ 1.28
PPFIA1-210ENST00000528284 CEMIPQ8WUJ3 1361 aa23.04■■□□□ 1.28
PPFIA1-210ENST00000528284 HEG1Q9ULI3 1381 aa23.04■■□□□ 1.28
PPFIA1-210ENST00000528284 TM4SF1P30408 202 aa23.04■■□□□ 1.28
PPFIA1-210ENST00000528284 FMNL2Q96PY5 1086 aa23.04■■□□□ 1.28
PPFIA1-210ENST00000528284 GIGYF1O75420 1035 aaPredicted RBP23.03■■□□□ 1.28
PPFIA1-210ENST00000528284 KIF13BQ9NQT8 1826 aa23.03■■□□□ 1.28
PPFIA1-210ENST00000528284 A0A087WZG4 1122 aa23.02■■□□□ 1.28
PPFIA1-210ENST00000528284 POLRMTO00411 1230 aaKnown RBP23.02■■□□□ 1.28
PPFIA1-210ENST00000528284 NEFMP07197 916 aa23.02■■□□□ 1.28
PPFIA1-210ENST00000528284 C1QTNF8P60827 252 aa23.02■■□□□ 1.28
PPFIA1-210ENST00000528284 UBR2Q8IWV8 1755 aa23.01■■□□□ 1.27
PPFIA1-210ENST00000528284 ATP10DQ9P241 1426 aa23■■□□□ 1.27
PPFIA1-210ENST00000528284 N4BP2Q86UW6 1770 aaPredicted RBP23■■□□□ 1.27
PPFIA1-210ENST00000528284 KCNQ3O43525 872 aa23■■□□□ 1.27
PPFIA1-210ENST00000528284 EIF5P55010 431 aaKnown RBP23■■□□□ 1.27
PPFIA1-210ENST00000528284 NFIXQ14938 502 aa23■■□□□ 1.27
PPFIA1-210ENST00000528284 MCM10Q7L590 875 aa23■■□□□ 1.27
PPFIA1-210ENST00000528284 PIM2Q9P1W9 311 aa23■■□□□ 1.27
PPFIA1-210ENST00000528284 HTATSF1O43719 755 aaKnown RBP22.99■■□□□ 1.27
PPFIA1-210ENST00000528284 ARHGAP27Q6ZUM4 889 aa22.99■■□□□ 1.27
PPFIA1-210ENST00000528284 NPM2Q86SE8 214 aaKnown RBP22.99■■□□□ 1.27
PPFIA1-210ENST00000528284 ZNF330Q9Y3S2 320 aaPredicted RBP22.99■■□□□ 1.27
PPFIA1-210ENST00000528284 KCNA3P22001 575 aa22.98■■□□□ 1.27
PPFIA1-210ENST00000528284 BCL2L12Q9HB09 334 aa22.98■■□□□ 1.27
PPFIA1-210ENST00000528284 GPBP1L1Q9HC44 474 aaPredicted RBP22.98■■□□□ 1.27
PPFIA1-210ENST00000528284 GOLGB1Q14789 3259 aaKnown RBP22.98■■□□□ 1.27
PPFIA1-210ENST00000528284 KIAA1551Q9HCM1 1747 aa22.97■■□□□ 1.27
PPFIA1-210ENST00000528284 IL6STP40189 918 aaPredicted RBP22.97■■□□□ 1.27
PPFIA1-210ENST00000528284 DCTN1Q14203 1278 aa22.97■■□□□ 1.27
PPFIA1-210ENST00000528284 SIPA1L3O60292 1781 aaPredicted RBP22.96■■□□□ 1.27
PPFIA1-210ENST00000528284 A1BGP04217 495 aa22.96■■□□□ 1.27
PPFIA1-210ENST00000528284 SERPINB2P05120 415 aa22.96■■□□□ 1.27
PPFIA1-210ENST00000528284 DALRD3Q5D0E6 543 aaKnown RBP22.96■■□□□ 1.27
PPFIA1-210ENST00000528284 ZNF526Q8TF50 670 aaPredicted RBP22.96■■□□□ 1.27
PPFIA1-210ENST00000528284 ADCY9O60503 1353 aa22.95■■□□□ 1.26
PPFIA1-210ENST00000528284 CHRNA5P30532 468 aa22.95■■□□□ 1.26
PPFIA1-210ENST00000528284 BICDL1Q6ZP65 573 aa22.95■■□□□ 1.26
PPFIA1-210ENST00000528284 PNNQ9H307 717 aaKnown RBP22.94■■□□□ 1.26
PPFIA1-210ENST00000528284 TBC1D2BQ9UPU7 963 aa22.94■■□□□ 1.26
PPFIA1-210ENST00000528284 SNRPA1P09661 255 aaKnown RBP22.93■■□□□ 1.26
PPFIA1-210ENST00000528284 TAF7Q15545 349 aaPredicted RBP22.93■■□□□ 1.26
PPFIA1-210ENST00000528284 USP16Q9Y5T5 823 aa22.93■■□□□ 1.26
PPFIA1-210ENST00000528284 SENP3-EIF4A1A0A087X0R7 540 aa22.92■■□□□ 1.26
PPFIA1-210ENST00000528284 RALBP1Q15311 655 aa22.92■■□□□ 1.26
PPFIA1-210ENST00000528284 DDX10Q13206 875 aaKnown RBP22.9■■□□□ 1.26
PPFIA1-210ENST00000528284 TBC1D9BQ66K14 1250 aa22.9■■□□□ 1.26
PPFIA1-210ENST00000528284 MAPK8IP3Q9UPT6 1336 aa22.89■■□□□ 1.26
PPFIA1-210ENST00000528284 PRAMEF22A3QJZ6 481 aa22.89■■□□□ 1.25
PPFIA1-210ENST00000528284 PLEKHF1Q96S99 279 aa22.89■■□□□ 1.25
PPFIA1-210ENST00000528284 NFE2L2Q16236 605 aa22.88■■□□□ 1.25
PPFIA1-210ENST00000528284 DZIP3Q86Y13 1208 aaKnown RBP22.88■■□□□ 1.25
PPFIA1-210ENST00000528284 PNISRQ8TF01 805 aaKnown RBP22.88■■□□□ 1.25
PPFIA1-210ENST00000528284 MIS18AQ9NYP9 233 aa22.88■■□□□ 1.25
PPFIA1-210ENST00000528284 H0YIN7 160 aa22.87■■□□□ 1.25
PPFIA1-210ENST00000528284 PIP4K2AP48426 406 aaPredicted RBP22.87■■□□□ 1.25
PPFIA1-210ENST00000528284 C2CD5Q86YS7 1000 aa22.87■■□□□ 1.25
PPFIA1-210ENST00000528284 BRCA1P38398 1863 aaKnown RBP22.87■■□□□ 1.25
PPFIA1-210ENST00000528284 CAMTA2O94983 1202 aa22.86■■□□□ 1.25
PPFIA1-210ENST00000528284 SETDB2Q96T68 719 aa22.86■■□□□ 1.25
PPFIA1-210ENST00000528284 AFDNP55196 1824 aaKnown RBP22.86■■□□□ 1.25
PPFIA1-210ENST00000528284 NPHP1O15259 732 aa22.85■■□□□ 1.25
PPFIA1-210ENST00000528284 C9orf131Q5VYM1 1079 aa22.85■■□□□ 1.25
PPFIA1-210ENST00000528284 TTLL6Q8N841 843 aa22.84■■□□□ 1.25
PPFIA1-210ENST00000528284 NRXN2Q9P2S2 1712 aa22.84■■□□□ 1.25
PPFIA1-210ENST00000528284 CARMIL3Q8ND23 1372 aa22.84■■□□□ 1.25
PPFIA1-210ENST00000528284 ARFGEF1Q9Y6D6 1849 aa22.83■■□□□ 1.25
PPFIA1-210ENST00000528284 PDE6BP35913 854 aa22.82■■□□□ 1.24
PPFIA1-210ENST00000528284 BRIP1Q9BX63 1249 aa22.82■■□□□ 1.24
PPFIA1-210ENST00000528284 PDZRN3Q9UPQ7 1066 aa22.82■■□□□ 1.24
PPFIA1-210ENST00000528284 ZNF652Q9Y2D9 606 aa22.82■■□□□ 1.24
PPFIA1-210ENST00000528284 PRR5LQ6MZQ0 368 aa22.81■■□□□ 1.24
PPFIA1-210ENST00000528284 CLEC4GQ6UXB4 293 aa22.81■■□□□ 1.24
PPFIA1-210ENST00000528284 CCDC24Q8N4L8 307 aa22.81■■□□□ 1.24
PPFIA1-210ENST00000528284 CNBD1Q8NA66 436 aa22.81■■□□□ 1.24
PPFIA1-210ENST00000528284 THUMPD2Q9BTF0 503 aaKnown RBP22.81■■□□□ 1.24
PPFIA1-210ENST00000528284 NBPF26B4DH59 902 aa22.8■■□□□ 1.24
PPFIA1-210ENST00000528284 NBPF10Q6P3W6 841 aaKnown RBP22.8■■□□□ 1.24
PPFIA1-210ENST00000528284 NBPF15Q8N660 670 aa22.8■■□□□ 1.24
PPFIA1-210ENST00000528284 ZNF622Q969S3 477 aaKnown RBP eCLIP22.8■■□□□ 1.24
PPFIA1-210ENST00000528284 RNF181Q9P0P0 153 aa22.8■■□□□ 1.24
PPFIA1-210ENST00000528284 SCN7AQ01118 1682 aa22.8■■□□□ 1.24
PPFIA1-210ENST00000528284 MYBBP1AQ9BQG0 1328 aaKnown RBP22.8■■□□□ 1.24
PPFIA1-210ENST00000528284 KIF3CO14782 793 aa22.79■■□□□ 1.24
PPFIA1-210ENST00000528284 ST5P78524 1137 aa22.79■■□□□ 1.24
PPFIA1-210ENST00000528284 RIPK4P57078 832 aa22.78■■□□□ 1.24
PPFIA1-210ENST00000528284 EIF4A1P60842 406 aaKnown RBP22.78■■□□□ 1.24
PPFIA1-210ENST00000528284 DLG5Q8TDM6 1919 aa22.78■■□□□ 1.24
PPFIA1-210ENST00000528284 NBPF5PQ86XG9 351 aaPredicted RBP22.77■■□□□ 1.24
PPFIA1-210ENST00000528284 RGL2O15211 777 aa22.75■■□□□ 1.23
PPFIA1-210ENST00000528284 RASSF7Q02833 373 aa22.75■■□□□ 1.23
PPFIA1-210ENST00000528284 NGEFQ8N5V2 710 aa22.75■■□□□ 1.23
PPFIA1-210ENST00000528284 NIP7Q9Y221 180 aaKnown RBP eCLIP22.75■■□□□ 1.23
PPFIA1-210ENST00000528284 LMOD3Q0VAK6 560 aa22.74■■□□□ 1.23
PPFIA1-210ENST00000528284 TSPYL4Q9UJ04 414 aa22.74■■□□□ 1.23
PPFIA1-210ENST00000528284 RRP7AQ9Y3A4 280 aaKnown RBP22.74■■□□□ 1.23
PPFIA1-210ENST00000528284 LMNB1P20700 586 aa22.73■■□□□ 1.23
PPFIA1-210ENST00000528284 TMPOP42166 694 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms