RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 KRT24Q2M2I5 525 aa12.48□□□□□ -0.41
MSRA-210ENST00000528246 PRPF40AO75400 957 aaKnown RBP12.47□□□□□ -0.41
MSRA-210ENST00000528246 NEK4P51957 841 aa12.47□□□□□ -0.41
MSRA-210ENST00000528246 HSP90AA2PQ14568 343 aaPredicted RBP12.47□□□□□ -0.41
MSRA-210ENST00000528246 ZGPATQ8N5A5 531 aaKnown RBP12.47□□□□□ -0.41
MSRA-210ENST00000528246 SSH3Q8TE77 659 aa12.47□□□□□ -0.41
MSRA-210ENST00000528246 CCDC39Q9UFE4 941 aa12.47□□□□□ -0.41
MSRA-210ENST00000528246 PIK3C2AO00443 1686 aa12.47□□□□□ -0.41
MSRA-210ENST00000528246 UVSSAQ2YD98 709 aa12.46□□□□□ -0.41
MSRA-210ENST00000528246 UPF1Q92900 1129 aaKnown RBP eCLIP12.46□□□□□ -0.41
MSRA-210ENST00000528246 MAP7D2Q96T17 732 aa12.46□□□□□ -0.41
MSRA-210ENST00000528246 RBSNQ9H1K0 784 aa12.46□□□□□ -0.41
MSRA-210ENST00000528246 SLAIN2Q9P270 581 aa12.46□□□□□ -0.41
MSRA-210ENST00000528246 WDR33Q9C0J8 1336 aaKnown RBP12.46□□□□□ -0.41
MSRA-210ENST00000528246 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 LETM1O95202 739 aaPredicted RBP12.45□□□□□ -0.42
MSRA-210ENST00000528246 HSPA4P34932 840 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 PRIM1P49642 420 aaKnown RBP12.45□□□□□ -0.42
MSRA-210ENST00000528246 PKP1Q13835 747 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 AMOTL2Q9Y2J4 779 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 ZKSCAN5Q9Y2L8 839 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 AK9Q5TCS8 1911 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 USP42Q9H9J4 1324 aaKnown RBP12.45□□□□□ -0.42
MSRA-210ENST00000528246 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 POLA2Q14181 598 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 HSP90AB4PQ58FF6 505 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 G2E3Q7L622 706 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 ADGRL3Q9HAR2 1447 aa12.45□□□□□ -0.42
MSRA-210ENST00000528246 EYA1Q99502 592 aa12.44□□□□□ -0.42
MSRA-210ENST00000528246 PDCL3Q9H2J4 239 aa12.44□□□□□ -0.42
MSRA-210ENST00000528246 TMEM63CQ9P1W3 806 aa12.44□□□□□ -0.42
MSRA-210ENST00000528246 PHLPP1O60346 1717 aa12.43□□□□□ -0.42
MSRA-210ENST00000528246 NCLP19338 710 aaKnown RBP12.43□□□□□ -0.42
MSRA-210ENST00000528246 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
MSRA-210ENST00000528246 SLC4A10Q6U841 1118 aa12.43□□□□□ -0.42
MSRA-210ENST00000528246 MTERF4Q7Z6M4 381 aaKnown RBP12.43□□□□□ -0.42
MSRA-210ENST00000528246 HDAC5Q9UQL6 1122 aa12.43□□□□□ -0.42
MSRA-210ENST00000528246 MARF1Q9Y4F3 1742 aaKnown RBP12.43□□□□□ -0.42
MSRA-210ENST00000528246 PHRF1Q9P1Y6 1649 aaKnown RBP12.43□□□□□ -0.42
MSRA-210ENST00000528246 OVOS2A0A0G2JMS6 1433 aa12.43□□□□□ -0.42
MSRA-210ENST00000528246 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
MSRA-210ENST00000528246 RAD50Q92878 1312 aa12.43□□□□□ -0.42
MSRA-210ENST00000528246 FKBP5Q13451 457 aaPredicted RBP12.42□□□□□ -0.42
MSRA-210ENST00000528246 KIAA1211Q6ZU35 1233 aa12.42□□□□□ -0.42
MSRA-210ENST00000528246 TTC41PQ6P2S7 1318 aa12.42□□□□□ -0.42
MSRA-210ENST00000528246 F6X3S4 739 aa12.42□□□□□ -0.42
MSRA-210ENST00000528246 UBTFL1P0CB47 393 aaPredicted RBP12.42□□□□□ -0.42
MSRA-210ENST00000528246 ATF3P18847 181 aa12.42□□□□□ -0.42
MSRA-210ENST00000528246 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
MSRA-210ENST00000528246 USP44Q9H0E7 712 aa12.42□□□□□ -0.42
MSRA-210ENST00000528246 C19orf44Q9H6X5 657 aa12.42□□□□□ -0.42
MSRA-210ENST00000528246 ANO2Q9NQ90 1003 aa12.42□□□□□ -0.42
MSRA-210ENST00000528246 EXOC6BQ9Y2D4 811 aa12.42□□□□□ -0.42
MSRA-210ENST00000528246 ATP6V1DQ9Y5K8 247 aa12.42□□□□□ -0.42
MSRA-210ENST00000528246 PNMA6EA0A0J9YXQ4 647 aa12.41□□□□□ -0.42
MSRA-210ENST00000528246 AMPHP49418 695 aa12.41□□□□□ -0.42
MSRA-210ENST00000528246 MTX1Q13505 466 aa12.41□□□□□ -0.42
MSRA-210ENST00000528246 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
MSRA-210ENST00000528246 TSPY26PQ9H489 355 aa12.41□□□□□ -0.42
MSRA-210ENST00000528246 SGSM2O43147 1006 aa12.4□□□□□ -0.42
MSRA-210ENST00000528246 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
MSRA-210ENST00000528246 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.4□□□□□ -0.42
MSRA-210ENST00000528246 KDM3BQ7LBC6 1761 aa12.4□□□□□ -0.42
MSRA-210ENST00000528246 RPAP1Q9BWH6 1393 aaPredicted RBP12.4□□□□□ -0.42
MSRA-210ENST00000528246 SYCE3A1L190 88 aa12.4□□□□□ -0.43
MSRA-210ENST00000528246 FOXO3O43524 673 aa12.4□□□□□ -0.43
MSRA-210ENST00000528246 CNTROBQ8N137 903 aa12.4□□□□□ -0.43
MSRA-210ENST00000528246 KCNB2Q92953 911 aa12.4□□□□□ -0.43
MSRA-210ENST00000528246 TM6SF1Q9BZW5 370 aa12.4□□□□□ -0.43
MSRA-210ENST00000528246 PALD1Q9ULE6 856 aa12.4□□□□□ -0.43
MSRA-210ENST00000528246 LRP6O75581 1613 aa12.39□□□□□ -0.43
MSRA-210ENST00000528246 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
MSRA-210ENST00000528246 JCADQ9P266 1359 aa12.39□□□□□ -0.43
MSRA-210ENST00000528246 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
MSRA-210ENST00000528246 APBB1O00213 710 aa12.39□□□□□ -0.43
MSRA-210ENST00000528246 HOXC9P31274 260 aa12.39□□□□□ -0.43
MSRA-210ENST00000528246 PI4K2BQ8TCG2 481 aa12.39□□□□□ -0.43
MSRA-210ENST00000528246 TTC14Q96N46 770 aa12.39□□□□□ -0.43
MSRA-210ENST00000528246 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
MSRA-210ENST00000528246 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
MSRA-210ENST00000528246 CCDC183Q5T5S1 534 aa12.38□□□□□ -0.43
MSRA-210ENST00000528246 RUFY2Q8WXA3 655 aa12.38□□□□□ -0.43
MSRA-210ENST00000528246 DYNC1I1O14576 645 aa12.37□□□□□ -0.43
MSRA-210ENST00000528246 IL17REQ8NFR9 667 aa12.37□□□□□ -0.43
MSRA-210ENST00000528246 RHPN1Q8TCX5 695 aa12.37□□□□□ -0.43
MSRA-210ENST00000528246 RILPL2Q969X0 211 aa12.37□□□□□ -0.43
MSRA-210ENST00000528246 ZSCAN31Q96LW9 406 aaPredicted RBP12.37□□□□□ -0.43
MSRA-210ENST00000528246 SH2B1Q9NRF2 756 aaPredicted RBP12.37□□□□□ -0.43
MSRA-210ENST00000528246 MIS18AQ9NYP9 233 aa12.37□□□□□ -0.43
MSRA-210ENST00000528246 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
MSRA-210ENST00000528246 LMO7Q8WWI1 1683 aa12.37□□□□□ -0.43
MSRA-210ENST00000528246 GLRX3O76003 335 aaKnown RBP12.37□□□□□ -0.43
MSRA-210ENST00000528246 UBE2HP62256 183 aa12.37□□□□□ -0.43
MSRA-210ENST00000528246 NGDNQ8NEJ9 315 aaKnown RBP12.37□□□□□ -0.43
MSRA-210ENST00000528246 LSG1Q9H089 658 aaKnown RBP12.37□□□□□ -0.43
MSRA-210ENST00000528246 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
MSRA-210ENST00000528246 ZSCAN22P10073 491 aaPredicted RBP12.36□□□□□ -0.43
MSRA-210ENST00000528246 HDGFL1Q5TGJ6 251 aa12.36□□□□□ -0.43
MSRA-210ENST00000528246 ERC1Q8IUD2 1116 aa12.36□□□□□ -0.43
MSRA-210ENST00000528246 SNRKQ9NRH2 765 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms