RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 LARP6Q9BRS8 491 aaKnown RBP17.54■□□□□ 0.4
CAPN1-214ENST00000528165 STK31Q9BXU1 1019 aa17.53■□□□□ 0.4
CAPN1-214ENST00000528165 DNM1Q05193 864 aaKnown RBP17.53■□□□□ 0.4
CAPN1-214ENST00000528165 RUFY3Q7L099 469 aa17.53■□□□□ 0.4
CAPN1-214ENST00000528165 TSPYL4Q9UJ04 414 aa17.53■□□□□ 0.4
CAPN1-214ENST00000528165 STAG3Q9UJ98 1225 aa17.53■□□□□ 0.4
CAPN1-214ENST00000528165 PTGS1P23219 599 aa17.52■□□□□ 0.4
CAPN1-214ENST00000528165 WASLO00401 505 aaPredicted RBP17.52■□□□□ 0.39
CAPN1-214ENST00000528165 FAM200AQ8TCP9 573 aa17.52■□□□□ 0.39
CAPN1-214ENST00000528165 RTF1Q92541 710 aaKnown RBP17.52■□□□□ 0.39
CAPN1-214ENST00000528165 IL1RAPL2Q9NP60 686 aa17.52■□□□□ 0.39
CAPN1-214ENST00000528165 OGFRQ9NZT2 677 aa17.52■□□□□ 0.39
CAPN1-214ENST00000528165 CRB1P82279 1406 aa17.51■□□□□ 0.39
CAPN1-214ENST00000528165 DLC1Q96QB1 1528 aa17.51■□□□□ 0.39
CAPN1-214ENST00000528165 SGSM2O43147 1006 aa17.51■□□□□ 0.39
CAPN1-214ENST00000528165 NUTM1Q86Y26 1132 aa17.51■□□□□ 0.39
CAPN1-214ENST00000528165 RAPGEF3O95398 923 aa17.5■□□□□ 0.39
CAPN1-214ENST00000528165 MAP4K4O95819 1239 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-214ENST00000528165 GJB2P29033 226 aa17.5■□□□□ 0.39
CAPN1-214ENST00000528165 LRRFIP2Q9Y608 721 aaKnown RBP17.5■□□□□ 0.39
CAPN1-214ENST00000528165 NCBP1Q09161 790 aaKnown RBP17.5■□□□□ 0.39
CAPN1-214ENST00000528165 RASEFQ8IZ41 740 aa17.5■□□□□ 0.39
CAPN1-214ENST00000528165 MTMR6Q9Y217 621 aa17.5■□□□□ 0.39
CAPN1-214ENST00000528165 CPS1P31327 1500 aa17.5■□□□□ 0.39
CAPN1-214ENST00000528165 ARHGEF10O15013 1369 aa17.49■□□□□ 0.39
CAPN1-214ENST00000528165 IGSF3O75054 1194 aa17.49■□□□□ 0.39
CAPN1-214ENST00000528165 CCDC83Q8IWF9 413 aa17.49■□□□□ 0.39
CAPN1-214ENST00000528165 SYCP1Q15431 976 aa17.49■□□□□ 0.39
CAPN1-214ENST00000528165 DRC7Q8IY82 874 aa17.49■□□□□ 0.39
CAPN1-214ENST00000528165 SMTNL1A8MU46 457 aa17.48■□□□□ 0.39
CAPN1-214ENST00000528165 CASTP20810 708 aaKnown RBP17.48■□□□□ 0.39
CAPN1-214ENST00000528165 FLIIQ13045 1269 aa17.48■□□□□ 0.39
CAPN1-214ENST00000528165 MAP3K11Q16584 847 aa17.48■□□□□ 0.39
CAPN1-214ENST00000528165 ZNF771Q7L3S4 317 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-214ENST00000528165 NUDT16Q96DE0 195 aaKnown RBP17.48■□□□□ 0.39
CAPN1-214ENST00000528165 C16orf45Q96MC5 204 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-214ENST00000528165 LSG1Q9H089 658 aaKnown RBP17.48■□□□□ 0.39
CAPN1-214ENST00000528165 VPS37CA5D8V6 355 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-214ENST00000528165 PREX1Q8TCU6 1659 aa17.48■□□□□ 0.39
CAPN1-214ENST00000528165 SOS1Q07889 1333 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-214ENST00000528165 NPM1P06748 294 aaKnown RBP eCLIP17.48■□□□□ 0.39
CAPN1-214ENST00000528165 CCDC186Q7Z3E2 898 aa17.48■□□□□ 0.39
CAPN1-214ENST00000528165 NUP62CLQ9H1M0 184 aa17.48■□□□□ 0.39
CAPN1-214ENST00000528165 NRKQ7Z2Y5 1582 aa17.48■□□□□ 0.39
CAPN1-214ENST00000528165 LARGE1O95461 756 aa17.47■□□□□ 0.39
CAPN1-214ENST00000528165 TAF3Q5VWG9 929 aa17.47■□□□□ 0.39
CAPN1-214ENST00000528165 CNTROBQ8N137 903 aa17.47■□□□□ 0.39
CAPN1-214ENST00000528165 NCKAP5LQ9HCH0 1330 aa17.47■□□□□ 0.39
CAPN1-214ENST00000528165 CPA1P15085 419 aa17.47■□□□□ 0.39
CAPN1-214ENST00000528165 TYRO3Q06418 890 aa17.47■□□□□ 0.39
CAPN1-214ENST00000528165 LUZP1Q86V48 1076 aa17.47■□□□□ 0.39
CAPN1-214ENST00000528165 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
CAPN1-214ENST00000528165 CCDC61Q9Y6R9 512 aa17.47■□□□□ 0.39
CAPN1-214ENST00000528165 CHMP3Q9Y3E7 222 aa17.46■□□□□ 0.39
CAPN1-214ENST00000528165 MRVI1Q9Y6F6 885 aa17.46■□□□□ 0.39
CAPN1-214ENST00000528165 UBTFL1P0CB47 393 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-214ENST00000528165 TNNT1P13805 278 aa17.46■□□□□ 0.39
CAPN1-214ENST00000528165 ZSCAN31Q96LW9 406 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-214ENST00000528165 CGNQ9P2M7 1197 aaKnown RBP17.46■□□□□ 0.39
CAPN1-214ENST00000528165 DIP2CQ9Y2E4 1556 aa17.46■□□□□ 0.39
CAPN1-214ENST00000528165 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 CAMK4Q16566 473 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 CCDC30Q5VVM6 783 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 FBXO31Q5XUX0 539 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-214ENST00000528165 CWC27Q6UX04 472 aaKnown RBP17.45■□□□□ 0.38
CAPN1-214ENST00000528165 PI4K2BQ8TCG2 481 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 SH2B1Q9NRF2 756 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-214ENST00000528165 PDRG1Q9NUG6 133 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 CTNNA3Q9UI47 895 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 KRT85P78386 507 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 LRMPQ12912 555 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 CCDC112Q8NEF3 446 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 SPG7Q9UQ90 795 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 PAXBP1Q9Y5B6 917 aa17.45■□□□□ 0.38
CAPN1-214ENST00000528165 FOXO3O43524 673 aa17.44■□□□□ 0.38
CAPN1-214ENST00000528165 DTNBO60941 627 aa17.44■□□□□ 0.38
CAPN1-214ENST00000528165 SURF6O75683 361 aaKnown RBP17.44■□□□□ 0.38
CAPN1-214ENST00000528165 GABPB1Q06547 395 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-214ENST00000528165 TRIM5Q9C035 493 aa17.44■□□□□ 0.38
CAPN1-214ENST00000528165 VPS53Q5VIR6 699 aa17.44■□□□□ 0.38
CAPN1-214ENST00000528165 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 TNMDQ9H2S6 317 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 ZSCAN25Q6NSZ9 544 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 TTC6Q86TZ1 520 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 SSH3Q8TE77 659 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 JAKMIP1Q96N16 626 aaKnown RBP17.43■□□□□ 0.38
CAPN1-214ENST00000528165 CBX8Q9HC52 389 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 MON2Q7Z3U7 1717 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 ANO6Q4KMQ2 910 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 CKAP2LQ8IYA6 745 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 USP44Q9H0E7 712 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 NRBP1Q9UHY1 535 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 CYP46A1Q9Y6A2 500 aa17.43■□□□□ 0.38
CAPN1-214ENST00000528165 GOLGA6L4A6NEF3 574 aa17.42■□□□□ 0.38
CAPN1-214ENST00000528165 LIG1P18858 919 aa17.42■□□□□ 0.38
CAPN1-214ENST00000528165 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
CAPN1-214ENST00000528165 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-214ENST00000528165 DDX41Q9UJV9 622 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms