RNA–Protein interactions for RNA: ENST00000527951.5

PDZD3-208, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-208ENST00000527951 COL13A1Q5TAT6 717 aaPredicted RBP23.46■■□□□ 1.35
PDZD3-208ENST00000527951 UBR2Q8IWV8 1755 aa23.46■■□□□ 1.35
PDZD3-208ENST00000527951 PANK3Q9H999 370 aa23.46■■□□□ 1.35
PDZD3-208ENST00000527951 SULT6B1Q6IMI4 303 aa23.45■■□□□ 1.34
PDZD3-208ENST00000527951 DNAJC10Q8IXB1 793 aa23.45■■□□□ 1.34
PDZD3-208ENST00000527951 ZC3H4Q9UPT8 1303 aaKnown RBP23.44■■□□□ 1.34
PDZD3-208ENST00000527951 PRELPP51888 382 aa23.44■■□□□ 1.34
PDZD3-208ENST00000527951 RASSF7Q02833 373 aa23.44■■□□□ 1.34
PDZD3-208ENST00000527951 ANKRD31Q8N7Z5 1873 aa23.43■■□□□ 1.34
PDZD3-208ENST00000527951 IL13P35225 146 aa23.43■■□□□ 1.34
PDZD3-208ENST00000527951 USPL1Q5W0Q7 1092 aa23.43■■□□□ 1.34
PDZD3-208ENST00000527951 DICER1Q9UPY3 1922 aaKnown RBP23.41■■□□□ 1.34
PDZD3-208ENST00000527951 NFIXQ14938 502 aa23.41■■□□□ 1.34
PDZD3-208ENST00000527951 SMC1BQ8NDV3 1235 aa23.41■■□□□ 1.34
PDZD3-208ENST00000527951 COL15A1P39059 1388 aa23.4■■□□□ 1.34
PDZD3-208ENST00000527951 ZPR1O75312 459 aa23.4■■□□□ 1.34
PDZD3-208ENST00000527951 CYP19A1P11511 503 aaPredicted RBP23.4■■□□□ 1.34
PDZD3-208ENST00000527951 SLC52A2Q9HAB3 445 aa23.4■■□□□ 1.34
PDZD3-208ENST00000527951 BCL2L12Q9HB09 334 aa23.4■■□□□ 1.34
PDZD3-208ENST00000527951 AKAP4Q5JQC9 854 aa23.39■■□□□ 1.33
PDZD3-208ENST00000527951 LGR6Q9HBX8 967 aa23.39■■□□□ 1.33
PDZD3-208ENST00000527951 NARFQ9UHQ1 456 aa23.39■■□□□ 1.33
PDZD3-208ENST00000527951 COL11A2P13942 1736 aaPredicted RBP23.39■■□□□ 1.33
PDZD3-208ENST00000527951 CARMIL3Q8ND23 1372 aa23.39■■□□□ 1.33
PDZD3-208ENST00000527951 FER1L6Q2WGJ9 1857 aa23.39■■□□□ 1.33
PDZD3-208ENST00000527951 MORC1Q86VD1 984 aa23.38■■□□□ 1.33
PDZD3-208ENST00000527951 ZBTB1Q9Y2K1 713 aa23.38■■□□□ 1.33
PDZD3-208ENST00000527951 LMNB1P20700 586 aa23.37■■□□□ 1.33
PDZD3-208ENST00000527951 SCN7AQ01118 1682 aa23.37■■□□□ 1.33
PDZD3-208ENST00000527951 GLTPD2A6NH11 291 aa23.36■■□□□ 1.33
PDZD3-208ENST00000527951 SLC39A6Q13433 755 aa23.36■■□□□ 1.33
PDZD3-208ENST00000527951 HSPA5P11021 654 aaKnown RBP23.35■■□□□ 1.33
PDZD3-208ENST00000527951 NFKBIEO00221 500 aa23.34■■□□□ 1.33
PDZD3-208ENST00000527951 RNMTO43148 476 aaKnown RBP23.34■■□□□ 1.33
PDZD3-208ENST00000527951 SERPINB2P05120 415 aa23.34■■□□□ 1.33
PDZD3-208ENST00000527951 SIPA1L3O60292 1781 aaPredicted RBP23.34■■□□□ 1.33
PDZD3-208ENST00000527951 POTECB2RU33 542 aa23.32■■□□□ 1.32
PDZD3-208ENST00000527951 VEGFAP15692 232 aaPredicted RBP23.32■■□□□ 1.32
PDZD3-208ENST00000527951 EIF4G2P78344 907 aaKnown RBP eCLIP23.32■■□□□ 1.32
PDZD3-208ENST00000527951 TTLL6Q8N841 843 aa23.32■■□□□ 1.32
PDZD3-208ENST00000527951 CACNA1SQ13698 1873 aa23.32■■□□□ 1.32
PDZD3-208ENST00000527951 AMER1Q5JTC6 1135 aaPredicted RBP23.3■■□□□ 1.32
PDZD3-208ENST00000527951 C2CD5Q86YS7 1000 aa23.3■■□□□ 1.32
PDZD3-208ENST00000527951 VSIG10Q8N0Z9 540 aa23.3■■□□□ 1.32
PDZD3-208ENST00000527951 ARFGEF2Q9Y6D5 1785 aa23.29■■□□□ 1.32
PDZD3-208ENST00000527951 TNS4Q8IZW8 715 aa23.29■■□□□ 1.32
PDZD3-208ENST00000527951 MTHFSDQ2M296 383 aaKnown RBP23.28■■□□□ 1.32
PDZD3-208ENST00000527951 SLX4Q8IY92 1834 aa23.27■■□□□ 1.32
PDZD3-208ENST00000527951 CAPN15O75808 1086 aa23.27■■□□□ 1.32
PDZD3-208ENST00000527951 HMOX1P09601 288 aa23.27■■□□□ 1.32
PDZD3-208ENST00000527951 HSPA1AP0DMV8 641 aaKnown RBP23.27■■□□□ 1.32
PDZD3-208ENST00000527951 HSPA1BP0DMV9 641 aaKnown RBP23.27■■□□□ 1.32
PDZD3-208ENST00000527951 EIF5P55010 431 aaKnown RBP23.27■■□□□ 1.32
PDZD3-208ENST00000527951 BCORQ6W2J9 1755 aa23.27■■□□□ 1.32
PDZD3-208ENST00000527951 H0YIN7 160 aa23.26■■□□□ 1.31
PDZD3-208ENST00000527951 KNSTRNQ9Y448 316 aa23.26■■□□□ 1.31
PDZD3-208ENST00000527951 CANXP27824 592 aaKnown RBP23.25■■□□□ 1.31
PDZD3-208ENST00000527951 TBC1D9BQ66K14 1250 aa23.23■■□□□ 1.31
PDZD3-208ENST00000527951 BICDL1Q6ZP65 573 aa23.23■■□□□ 1.31
PDZD3-208ENST00000527951 COL3A1P02461 1466 aaPredicted RBP23.22■■□□□ 1.31
PDZD3-208ENST00000527951 PRR5LQ6MZQ0 368 aa23.21■■□□□ 1.31
PDZD3-208ENST00000527951 HEG1Q9ULI3 1381 aa23.2■■□□□ 1.3
PDZD3-208ENST00000527951 LTBP3Q9NS15 1303 aa23.2■■□□□ 1.3
PDZD3-208ENST00000527951 ZNF496Q96IT1 587 aaPredicted RBP23.2■■□□□ 1.3
PDZD3-208ENST00000527951 BRIP1Q9BX63 1249 aa23.2■■□□□ 1.3
PDZD3-208ENST00000527951 A0A087WZG4 1122 aa23.19■■□□□ 1.3
PDZD3-208ENST00000527951 C21orf2O43822 256 aa23.19■■□□□ 1.3
PDZD3-208ENST00000527951 STARD3NLO95772 234 aa23.19■■□□□ 1.3
PDZD3-208ENST00000527951 PDZRN3Q9UPQ7 1066 aa23.19■■□□□ 1.3
PDZD3-208ENST00000527951 SCN4AP35499 1836 aa23.18■■□□□ 1.3
PDZD3-208ENST00000527951 ERFEQ4G0M1 354 aa23.18■■□□□ 1.3
PDZD3-208ENST00000527951 CCDC24Q8N4L8 307 aa23.18■■□□□ 1.3
PDZD3-208ENST00000527951 ZNF622Q969S3 477 aaKnown RBP eCLIP23.18■■□□□ 1.3
PDZD3-208ENST00000527951 PDE6BP35913 854 aa23.17■■□□□ 1.3
PDZD3-208ENST00000527951 DPY19L2Q6NUT2 758 aa23.17■■□□□ 1.3
PDZD3-208ENST00000527951 DIAPH1O60610 1272 aaKnown RBP23.16■■□□□ 1.3
PDZD3-208ENST00000527951 POTEIP0CG38 1075 aa23.16■■□□□ 1.3
PDZD3-208ENST00000527951 POTEJP0CG39 1038 aa23.16■■□□□ 1.3
PDZD3-208ENST00000527951 TTC5Q8N0Z6 440 aa23.16■■□□□ 1.3
PDZD3-208ENST00000527951 IL17REQ8NFR9 667 aa23.16■■□□□ 1.3
PDZD3-208ENST00000527951 ZNF219Q9P2Y4 722 aaPredicted RBP23.16■■□□□ 1.3
PDZD3-208ENST00000527951 TBC1D2BQ9UPU7 963 aa23.16■■□□□ 1.3
PDZD3-208ENST00000527951 IL6STP40189 918 aaPredicted RBP23.15■■□□□ 1.3
PDZD3-208ENST00000527951 ZNF790Q6PG37 636 aa23.15■■□□□ 1.3
PDZD3-208ENST00000527951 TAOK3Q9H2K8 898 aa23.15■■□□□ 1.3
PDZD3-208ENST00000527951 CREBZFQ9NS37 354 aa23.15■■□□□ 1.3
PDZD3-208ENST00000527951 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.29
PDZD3-208ENST00000527951 CAMTA2O94983 1202 aa23.14■■□□□ 1.29
PDZD3-208ENST00000527951 CHADLQ6NUI6 762 aa23.14■■□□□ 1.29
PDZD3-208ENST00000527951 KIF7Q2M1P5 1343 aa23.13■■□□□ 1.29
PDZD3-208ENST00000527951 ADAMTSL1Q8N6G6 1762 aa23.12■■□□□ 1.29
PDZD3-208ENST00000527951 DDNO94850 711 aaPredicted RBP23.12■■□□□ 1.29
PDZD3-208ENST00000527951 PRPF40BQ6NWY9 871 aaKnown RBP23.12■■□□□ 1.29
PDZD3-208ENST00000527951 TEX13AQ9BXU3 409 aaPredicted RBP23.12■■□□□ 1.29
PDZD3-208ENST00000527951 CEMIPQ8WUJ3 1361 aa23.12■■□□□ 1.29
PDZD3-208ENST00000527951 A1BGP04217 495 aa23.11■■□□□ 1.29
PDZD3-208ENST00000527951 SRGNP10124 158 aa23.11■■□□□ 1.29
PDZD3-208ENST00000527951 STYK1Q6J9G0 422 aa23.11■■□□□ 1.29
PDZD3-208ENST00000527951 CNBD1Q8NA66 436 aa23.11■■□□□ 1.29
PDZD3-208ENST00000527951 ZNF330Q9Y3S2 320 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms