RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ZNF496Q96IT1 587 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-212ENST00000527887 HEG1Q9ULI3 1381 aa18.92■□□□□ 0.62
CAPN1-212ENST00000527887 BTBD11A6QL63 1104 aa18.91■□□□□ 0.62
CAPN1-212ENST00000527887 GIGYF1O75420 1035 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-212ENST00000527887 NEFMP07197 916 aa18.91■□□□□ 0.62
CAPN1-212ENST00000527887 C1QTNF8P60827 252 aa18.91■□□□□ 0.62
CAPN1-212ENST00000527887 COL15A1P39059 1388 aa18.91■□□□□ 0.62
CAPN1-212ENST00000527887 C4AP0C0L4 1744 aa18.91■□□□□ 0.62
CAPN1-212ENST00000527887 POLRMTO00411 1230 aaKnown RBP18.9■□□□□ 0.62
CAPN1-212ENST00000527887 DPEP1P16444 411 aa18.9■□□□□ 0.62
CAPN1-212ENST00000527887 EIF5P55010 431 aaKnown RBP18.9■□□□□ 0.62
CAPN1-212ENST00000527887 DDR1Q08345 913 aa18.9■□□□□ 0.62
CAPN1-212ENST00000527887 CANXP27824 592 aaKnown RBP18.89■□□□□ 0.61
CAPN1-212ENST00000527887 PNNQ9H307 717 aaKnown RBP18.89■□□□□ 0.61
CAPN1-212ENST00000527887 PIM2Q9P1W9 311 aa18.89■□□□□ 0.61
CAPN1-212ENST00000527887 BCS1LQ9Y276 419 aa18.89■□□□□ 0.61
CAPN1-212ENST00000527887 KIF13BQ9NQT8 1826 aa18.88■□□□□ 0.61
CAPN1-212ENST00000527887 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-212ENST00000527887 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
CAPN1-212ENST00000527887 ADCY9O60503 1353 aa18.87■□□□□ 0.61
CAPN1-212ENST00000527887 KCNA3P22001 575 aa18.87■□□□□ 0.61
CAPN1-212ENST00000527887 WWC3Q9ULE0 1092 aa18.87■□□□□ 0.61
CAPN1-212ENST00000527887 ATP10DQ9P241 1426 aa18.86■□□□□ 0.61
CAPN1-212ENST00000527887 NFIXQ14938 502 aa18.86■□□□□ 0.61
CAPN1-212ENST00000527887 GPBP1L1Q9HC44 474 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-212ENST00000527887 DALRD3Q5D0E6 543 aaKnown RBP18.85■□□□□ 0.61
CAPN1-212ENST00000527887 BCL2L12Q9HB09 334 aa18.85■□□□□ 0.61
CAPN1-212ENST00000527887 UBR2Q8IWV8 1755 aa18.85■□□□□ 0.61
CAPN1-212ENST00000527887 SERPINB2P05120 415 aa18.84■□□□□ 0.61
CAPN1-212ENST00000527887 RALBP1Q15311 655 aa18.84■□□□□ 0.61
CAPN1-212ENST00000527887 ARHGAP27Q6ZUM4 889 aa18.84■□□□□ 0.61
CAPN1-212ENST00000527887 MCM10Q7L590 875 aa18.84■□□□□ 0.61
CAPN1-212ENST00000527887 SNRPA1P09661 255 aaKnown RBP18.83■□□□□ 0.6
CAPN1-212ENST00000527887 TAF7Q15545 349 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-212ENST00000527887 PDZRN3Q9UPQ7 1066 aa18.83■□□□□ 0.6
CAPN1-212ENST00000527887 PNISRQ8TF01 805 aaKnown RBP18.82■□□□□ 0.6
CAPN1-212ENST00000527887 KCNQ3O43525 872 aa18.81■□□□□ 0.6
CAPN1-212ENST00000527887 A1BGP04217 495 aa18.81■□□□□ 0.6
CAPN1-212ENST00000527887 PLEKHF1Q96S99 279 aa18.81■□□□□ 0.6
CAPN1-212ENST00000527887 VIRMAQ69YN4 1812 aaKnown RBP18.81■□□□□ 0.6
CAPN1-212ENST00000527887 KIAA1551Q9HCM1 1747 aa18.8■□□□□ 0.6
CAPN1-212ENST00000527887 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
CAPN1-212ENST00000527887 SIPA1L3O60292 1781 aaPredicted RBP18.8■□□□□ 0.6
CAPN1-212ENST00000527887 RGL2O15211 777 aa18.79■□□□□ 0.6
CAPN1-212ENST00000527887 CHRNA5P30532 468 aa18.79■□□□□ 0.6
CAPN1-212ENST00000527887 DCTN1Q14203 1278 aa18.79■□□□□ 0.6
CAPN1-212ENST00000527887 CLEC4GQ6UXB4 293 aa18.79■□□□□ 0.6
CAPN1-212ENST00000527887 TBC1D2BQ9UPU7 963 aa18.79■□□□□ 0.6
CAPN1-212ENST00000527887 NFE2L2Q16236 605 aa18.78■□□□□ 0.6
CAPN1-212ENST00000527887 SETDB2Q96T68 719 aa18.78■□□□□ 0.6
CAPN1-212ENST00000527887 ZNF330Q9Y3S2 320 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-212ENST00000527887 MAPK8IP3Q9UPT6 1336 aa18.77■□□□□ 0.6
CAPN1-212ENST00000527887 SENP3-EIF4A1A0A087X0R7 540 aa18.77■□□□□ 0.6
CAPN1-212ENST00000527887 H0YIN7 160 aa18.77■□□□□ 0.6
CAPN1-212ENST00000527887 TBC1D9BQ66K14 1250 aa18.77■□□□□ 0.6
CAPN1-212ENST00000527887 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.6
CAPN1-212ENST00000527887 BRIP1Q9BX63 1249 aa18.77■□□□□ 0.6
CAPN1-212ENST00000527887 N4BP2Q86UW6 1770 aaPredicted RBP18.77■□□□□ 0.6
CAPN1-212ENST00000527887 CARMIL3Q8ND23 1372 aa18.77■□□□□ 0.6
CAPN1-212ENST00000527887 CAMTA2O94983 1202 aa18.76■□□□□ 0.59
CAPN1-212ENST00000527887 PDE6BP35913 854 aa18.76■□□□□ 0.59
CAPN1-212ENST00000527887 BICDL1Q6ZP65 573 aa18.76■□□□□ 0.59
CAPN1-212ENST00000527887 TTLL6Q8N841 843 aa18.76■□□□□ 0.59
CAPN1-212ENST00000527887 C2CD5Q86YS7 1000 aa18.75■□□□□ 0.59
CAPN1-212ENST00000527887 ZNF526Q8TF50 670 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-212ENST00000527887 ZNF652Q9Y2D9 606 aa18.75■□□□□ 0.59
CAPN1-212ENST00000527887 C9orf131Q5VYM1 1079 aa18.74■□□□□ 0.59
CAPN1-212ENST00000527887 NRXN2Q9P2S2 1712 aa18.74■□□□□ 0.59
CAPN1-212ENST00000527887 PRAMEF22A3QJZ6 481 aa18.73■□□□□ 0.59
CAPN1-212ENST00000527887 DDX10Q13206 875 aaKnown RBP18.73■□□□□ 0.59
CAPN1-212ENST00000527887 BRCA1P38398 1863 aaKnown RBP18.72■□□□□ 0.59
CAPN1-212ENST00000527887 PRR5LQ6MZQ0 368 aa18.72■□□□□ 0.59
CAPN1-212ENST00000527887 CNBD1Q8NA66 436 aa18.72■□□□□ 0.59
CAPN1-212ENST00000527887 MYBBP1AQ9BQG0 1328 aaKnown RBP18.72■□□□□ 0.59
CAPN1-212ENST00000527887 KIF3CO14782 793 aa18.71■□□□□ 0.59
CAPN1-212ENST00000527887 NPHP1O15259 732 aa18.71■□□□□ 0.59
CAPN1-212ENST00000527887 ST5P78524 1137 aa18.71■□□□□ 0.59
CAPN1-212ENST00000527887 BABAM1Q9NWV8 329 aa18.71■□□□□ 0.59
CAPN1-212ENST00000527887 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
CAPN1-212ENST00000527887 ZC3H4Q9UPT8 1303 aaKnown RBP18.71■□□□□ 0.59
CAPN1-212ENST00000527887 ARFGEF1Q9Y6D6 1849 aa18.7■□□□□ 0.58
CAPN1-212ENST00000527887 NBPF26B4DH59 902 aa18.7■□□□□ 0.58
CAPN1-212ENST00000527887 EIF4A1P60842 406 aaKnown RBP18.7■□□□□ 0.58
CAPN1-212ENST00000527887 LMOD3Q0VAK6 560 aa18.7■□□□□ 0.58
CAPN1-212ENST00000527887 NBPF10Q6P3W6 841 aaKnown RBP18.7■□□□□ 0.58
CAPN1-212ENST00000527887 NBPF15Q8N660 670 aa18.7■□□□□ 0.58
CAPN1-212ENST00000527887 RNF181Q9P0P0 153 aa18.7■□□□□ 0.58
CAPN1-212ENST00000527887 KDM2BQ8NHM5 1336 aa18.69■□□□□ 0.58
CAPN1-212ENST00000527887 PIP4K2AP48426 406 aaPredicted RBP18.68■□□□□ 0.58
CAPN1-212ENST00000527887 RIPK4P57078 832 aa18.68■□□□□ 0.58
CAPN1-212ENST00000527887 TPTE2Q6XPS3 522 aa18.68■□□□□ 0.58
CAPN1-212ENST00000527887 CNKSR1Q969H4 720 aa18.68■□□□□ 0.58
CAPN1-212ENST00000527887 ZNF622Q969S3 477 aaKnown RBP eCLIP18.68■□□□□ 0.58
CAPN1-212ENST00000527887 SCN7AQ01118 1682 aa18.68■□□□□ 0.58
CAPN1-212ENST00000527887 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
CAPN1-212ENST00000527887 ERVV-1B6SEH8 477 aa18.67■□□□□ 0.58
CAPN1-212ENST00000527887 TOMM70O94826 608 aa18.67■□□□□ 0.58
CAPN1-212ENST00000527887 LMNB1P20700 586 aa18.67■□□□□ 0.58
CAPN1-212ENST00000527887 STYK1Q6J9G0 422 aa18.67■□□□□ 0.58
CAPN1-212ENST00000527887 NBPF5PQ86XG9 351 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms