RNA–Protein interactions for RNA: ENST00000527765.1

SYVN1-209, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 516 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-209ENST00000527765 DDX10Q13206 875 aaKnown RBP17.12■□□□□ 0.33
SYVN1-209ENST00000527765 MCM10Q7L590 875 aa17.12■□□□□ 0.33
SYVN1-209ENST00000527765 ZBTB1Q9Y2K1 713 aa17.12■□□□□ 0.33
SYVN1-209ENST00000527765 HEG1Q9ULI3 1381 aa17.12■□□□□ 0.33
SYVN1-209ENST00000527765 TJP1Q07157 1748 aa17.11■□□□□ 0.33
SYVN1-209ENST00000527765 WWC3Q9ULE0 1092 aa17.11■□□□□ 0.33
SYVN1-209ENST00000527765 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
SYVN1-209ENST00000527765 COL15A1P39059 1388 aa17.11■□□□□ 0.33
SYVN1-209ENST00000527765 A0A0G2JLW4 131 aa17.1■□□□□ 0.33
SYVN1-209ENST00000527765 ZNF330Q9Y3S2 320 aaPredicted RBP17.1■□□□□ 0.33
SYVN1-209ENST00000527765 BCS1LQ9Y276 419 aa17.09■□□□□ 0.33
SYVN1-209ENST00000527765 C10orf71Q711Q0 1435 aa17.09■□□□□ 0.33
SYVN1-209ENST00000527765 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.32
SYVN1-209ENST00000527765 DPEP1P16444 411 aa17.08■□□□□ 0.32
SYVN1-209ENST00000527765 TM4SF1P30408 202 aa17.08■□□□□ 0.32
SYVN1-209ENST00000527765 IL6STP40189 918 aaPredicted RBP17.08■□□□□ 0.32
SYVN1-209ENST00000527765 EIF5P55010 431 aaKnown RBP17.08■□□□□ 0.32
SYVN1-209ENST00000527765 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.32
SYVN1-209ENST00000527765 PNISRQ8TF01 805 aaKnown RBP17.08■□□□□ 0.32
SYVN1-209ENST00000527765 C4AP0C0L4 1744 aa17.07■□□□□ 0.32
SYVN1-209ENST00000527765 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
SYVN1-209ENST00000527765 DDR1Q08345 913 aa17.07■□□□□ 0.32
SYVN1-209ENST00000527765 PIM2Q9P1W9 311 aa17.07■□□□□ 0.32
SYVN1-209ENST00000527765 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
SYVN1-209ENST00000527765 PXDNLA1KZ92 1463 aa17.06■□□□□ 0.32
SYVN1-209ENST00000527765 DCTN1Q14203 1278 aa17.06■□□□□ 0.32
SYVN1-209ENST00000527765 NFE2L2Q16236 605 aa17.06■□□□□ 0.32
SYVN1-209ENST00000527765 KCNQ3O43525 872 aa17.05■□□□□ 0.32
SYVN1-209ENST00000527765 NFIXQ14938 502 aa17.05■□□□□ 0.32
SYVN1-209ENST00000527765 DALRD3Q5D0E6 543 aaKnown RBP17.05■□□□□ 0.32
SYVN1-209ENST00000527765 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
SYVN1-209ENST00000527765 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
SYVN1-209ENST00000527765 GIGYF1O75420 1035 aaPredicted RBP17.04■□□□□ 0.32
SYVN1-209ENST00000527765 A1BGP04217 495 aa17.04■□□□□ 0.32
SYVN1-209ENST00000527765 SERPINB2P05120 415 aa17.04■□□□□ 0.32
SYVN1-209ENST00000527765 ARHGAP27Q6ZUM4 889 aa17.04■□□□□ 0.32
SYVN1-209ENST00000527765 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
SYVN1-209ENST00000527765 TBC1D2BQ9UPU7 963 aa17.04■□□□□ 0.32
SYVN1-209ENST00000527765 NPHP1O15259 732 aa17.03■□□□□ 0.32
SYVN1-209ENST00000527765 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
SYVN1-209ENST00000527765 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
SYVN1-209ENST00000527765 GPBP1L1Q9HC44 474 aaPredicted RBP17.02■□□□□ 0.32
SYVN1-209ENST00000527765 USP16Q9Y5T5 823 aa17.02■□□□□ 0.32
SYVN1-209ENST00000527765 KIF13BQ9NQT8 1826 aa17.01■□□□□ 0.31
SYVN1-209ENST00000527765 LMOD3Q0VAK6 560 aa17.01■□□□□ 0.31
SYVN1-209ENST00000527765 WDR43Q15061 677 aaKnown RBP eCLIP17.01■□□□□ 0.31
SYVN1-209ENST00000527765 DZIP3Q86Y13 1208 aaKnown RBP17.01■□□□□ 0.31
SYVN1-209ENST00000527765 SETDB2Q96T68 719 aa17.01■□□□□ 0.31
SYVN1-209ENST00000527765 BCL2L12Q9HB09 334 aa17.01■□□□□ 0.31
SYVN1-209ENST00000527765 ZNF652Q9Y2D9 606 aa17.01■□□□□ 0.31
SYVN1-209ENST00000527765 SIPA1L3O60292 1781 aaPredicted RBP17.01■□□□□ 0.31
SYVN1-209ENST00000527765 KCNA3P22001 575 aa17■□□□□ 0.31
SYVN1-209ENST00000527765 MIS18AQ9NYP9 233 aa17■□□□□ 0.31
SYVN1-209ENST00000527765 PDZRN3Q9UPQ7 1066 aa17■□□□□ 0.31
SYVN1-209ENST00000527765 ATP10DQ9P241 1426 aa16.99■□□□□ 0.31
SYVN1-209ENST00000527765 H0YIN7 160 aa16.99■□□□□ 0.31
SYVN1-209ENST00000527765 CHRNA5P30532 468 aa16.99■□□□□ 0.31
SYVN1-209ENST00000527765 RIPK4P57078 832 aa16.99■□□□□ 0.31
SYVN1-209ENST00000527765 C1QTNF8P60827 252 aa16.99■□□□□ 0.31
SYVN1-209ENST00000527765 TBC1D9BQ66K14 1250 aa16.99■□□□□ 0.31
SYVN1-209ENST00000527765 CARMIL3Q8ND23 1372 aa16.99■□□□□ 0.31
SYVN1-209ENST00000527765 PDE6BP35913 854 aa16.98■□□□□ 0.31
SYVN1-209ENST00000527765 CLEC4GQ6UXB4 293 aa16.98■□□□□ 0.31
SYVN1-209ENST00000527765 C2CD5Q86YS7 1000 aa16.98■□□□□ 0.31
SYVN1-209ENST00000527765 N4BP2Q86UW6 1770 aaPredicted RBP16.97■□□□□ 0.31
SYVN1-209ENST00000527765 PRAMEF22A3QJZ6 481 aa16.97■□□□□ 0.31
SYVN1-209ENST00000527765 CAMTA2O94983 1202 aa16.97■□□□□ 0.31
SYVN1-209ENST00000527765 ZNF526Q8TF50 670 aaPredicted RBP16.97■□□□□ 0.31
SYVN1-209ENST00000527765 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
SYVN1-209ENST00000527765 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
SYVN1-209ENST00000527765 ST5P78524 1137 aa16.96■□□□□ 0.31
SYVN1-209ENST00000527765 TTLL6Q8N841 843 aa16.96■□□□□ 0.31
SYVN1-209ENST00000527765 CNBD1Q8NA66 436 aa16.96■□□□□ 0.31
SYVN1-209ENST00000527765 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
SYVN1-209ENST00000527765 RGL2O15211 777 aa16.95■□□□□ 0.3
SYVN1-209ENST00000527765 BABAM1Q9NWV8 329 aa16.95■□□□□ 0.3
SYVN1-209ENST00000527765 TSPYL4Q9UJ04 414 aa16.95■□□□□ 0.3
SYVN1-209ENST00000527765 ADCY9O60503 1353 aa16.94■□□□□ 0.3
SYVN1-209ENST00000527765 TMPOP42166 694 aaKnown RBP16.94■□□□□ 0.3
SYVN1-209ENST00000527765 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
SYVN1-209ENST00000527765 NBPF5PQ86XG9 351 aaPredicted RBP16.94■□□□□ 0.3
SYVN1-209ENST00000527765 RUNDC1Q96C34 613 aa16.94■□□□□ 0.3
SYVN1-209ENST00000527765 PRR5LQ6MZQ0 368 aa16.93■□□□□ 0.3
SYVN1-209ENST00000527765 ZNF622Q969S3 477 aaKnown RBP eCLIP16.93■□□□□ 0.3
SYVN1-209ENST00000527765 PRKRIP1Q9H875 184 aaPredicted RBP16.93■□□□□ 0.3
SYVN1-209ENST00000527765 KIAA1551Q9HCM1 1747 aa16.93■□□□□ 0.3
SYVN1-209ENST00000527765 NBPF26B4DH59 902 aa16.92■□□□□ 0.3
SYVN1-209ENST00000527765 NEUROD2Q15784 382 aa16.92■□□□□ 0.3
SYVN1-209ENST00000527765 C9orf131Q5VYM1 1079 aa16.92■□□□□ 0.3
SYVN1-209ENST00000527765 NBPF10Q6P3W6 841 aaKnown RBP16.92■□□□□ 0.3
SYVN1-209ENST00000527765 TPTE2Q6XPS3 522 aa16.92■□□□□ 0.3
SYVN1-209ENST00000527765 KIF6Q6ZMV9 814 aa16.92■□□□□ 0.3
SYVN1-209ENST00000527765 NBPF15Q8N660 670 aa16.92■□□□□ 0.3
SYVN1-209ENST00000527765 RRP7AQ9Y3A4 280 aaKnown RBP16.92■□□□□ 0.3
SYVN1-209ENST00000527765 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
SYVN1-209ENST00000527765 GTF2E1P29083 439 aaPredicted RBP16.91■□□□□ 0.3
SYVN1-209ENST00000527765 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
SYVN1-209ENST00000527765 NGEFQ8N5V2 710 aa16.91■□□□□ 0.3
SYVN1-209ENST00000527765 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
SYVN1-209ENST00000527765 CNKSR1Q969H4 720 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms