RNA–Protein interactions for RNA: ENST00000527745.3

FGFR1-232, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 790 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-232ENST00000527745 GAS2L2Q8NHY3 880 aa9.49□□□□□ -0.89
FGFR1-232ENST00000527745 ZBTB1Q9Y2K1 713 aa9.49□□□□□ -0.89
FGFR1-232ENST00000527745 POLRMTO00411 1230 aaKnown RBP9.48□□□□□ -0.89
FGFR1-232ENST00000527745 ARHGAP27Q6ZUM4 889 aa9.48□□□□□ -0.89
FGFR1-232ENST00000527745 TTC5Q8N0Z6 440 aa9.48□□□□□ -0.89
FGFR1-232ENST00000527745 SBF1O95248 1867 aa9.48□□□□□ -0.89
FGFR1-232ENST00000527745 BCORQ6W2J9 1755 aa9.47□□□□□ -0.89
FGFR1-232ENST00000527745 GNAT3A8MTJ3 354 aa9.47□□□□□ -0.89
FGFR1-232ENST00000527745 KCNA3P22001 575 aa9.47□□□□□ -0.89
FGFR1-232ENST00000527745 TEFQ10587 303 aa9.47□□□□□ -0.89
FGFR1-232ENST00000527745 VSIG10Q8N0Z9 540 aa9.47□□□□□ -0.89
FGFR1-232ENST00000527745 CFAP53Q96M91 514 aa9.47□□□□□ -0.89
FGFR1-232ENST00000527745 ANKRD31Q8N7Z5 1873 aa9.47□□□□□ -0.89
FGFR1-232ENST00000527745 COL11A2P13942 1736 aaPredicted RBP9.46□□□□□ -0.89
FGFR1-232ENST00000527745 STARD3NLO95772 234 aa9.46□□□□□ -0.9
FGFR1-232ENST00000527745 CANXP27824 592 aaKnown RBP9.46□□□□□ -0.9
FGFR1-232ENST00000527745 TM4SF1P30408 202 aa9.46□□□□□ -0.9
FGFR1-232ENST00000527745 CHRNA5P30532 468 aa9.46□□□□□ -0.9
FGFR1-232ENST00000527745 NFIXQ14938 502 aa9.46□□□□□ -0.9
FGFR1-232ENST00000527745 DALRD3Q5D0E6 543 aaKnown RBP9.46□□□□□ -0.9
FGFR1-232ENST00000527745 PIM2Q9P1W9 311 aa9.46□□□□□ -0.9
FGFR1-232ENST00000527745 NARFQ9UHQ1 456 aa9.46□□□□□ -0.9
FGFR1-232ENST00000527745 CACNA1SQ13698 1873 aa9.46□□□□□ -0.9
FGFR1-232ENST00000527745 HEG1Q9ULI3 1381 aa9.46□□□□□ -0.9
FGFR1-232ENST00000527745 TNRC6CQ9HCJ0 1690 aaKnown RBP9.45□□□□□ -0.9
FGFR1-232ENST00000527745 TIAM2Q8IVF5 1701 aa9.45□□□□□ -0.9
FGFR1-232ENST00000527745 CCDC88AQ3V6T2 1871 aa9.45□□□□□ -0.9
FGFR1-232ENST00000527745 DLG5Q8TDM6 1919 aa9.45□□□□□ -0.9
FGFR1-232ENST00000527745 KIF3CO14782 793 aa9.45□□□□□ -0.9
FGFR1-232ENST00000527745 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
FGFR1-232ENST00000527745 ZNF790Q6PG37 636 aa9.45□□□□□ -0.9
FGFR1-232ENST00000527745 IL17REQ8NFR9 667 aa9.45□□□□□ -0.9
FGFR1-232ENST00000527745 ZNF496Q96IT1 587 aaPredicted RBP9.45□□□□□ -0.9
FGFR1-232ENST00000527745 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
FGFR1-232ENST00000527745 CEMIPQ8WUJ3 1361 aa9.45□□□□□ -0.9
FGFR1-232ENST00000527745 HSPA6P17066 643 aa9.44□□□□□ -0.9
FGFR1-232ENST00000527745 C9orf131Q5VYM1 1079 aa9.44□□□□□ -0.9
FGFR1-232ENST00000527745 BCL2L12Q9HB09 334 aa9.44□□□□□ -0.9
FGFR1-232ENST00000527745 NUDCQ9Y266 331 aa9.44□□□□□ -0.9
FGFR1-232ENST00000527745 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
FGFR1-232ENST00000527745 CARMIL3Q8ND23 1372 aa9.44□□□□□ -0.9
FGFR1-232ENST00000527745 LAMB4A4D0S4 1761 aa9.44□□□□□ -0.9
FGFR1-232ENST00000527745 A0A087WZG4 1122 aa9.43□□□□□ -0.9
FGFR1-232ENST00000527745 SERPINB2P05120 415 aa9.43□□□□□ -0.9
FGFR1-232ENST00000527745 U2AF1L5P0DN76 240 aaPredicted RBP9.43□□□□□ -0.9
FGFR1-232ENST00000527745 PPP2R1AP30153 589 aa9.43□□□□□ -0.9
FGFR1-232ENST00000527745 EIF5P55010 431 aaKnown RBP9.43□□□□□ -0.9
FGFR1-232ENST00000527745 U2AF1Q01081 240 aaKnown RBP eCLIP9.43□□□□□ -0.9
FGFR1-232ENST00000527745 BICDL1Q6ZP65 573 aa9.43□□□□□ -0.9
FGFR1-232ENST00000527745 PHACTR3Q96KR7 559 aa9.43□□□□□ -0.9
FGFR1-232ENST00000527745 FMNL2Q96PY5 1086 aa9.43□□□□□ -0.9
FGFR1-232ENST00000527745 BTBD11A6QL63 1104 aa9.42□□□□□ -0.9
FGFR1-232ENST00000527745 TEX13AQ9BXU3 409 aaPredicted RBP9.42□□□□□ -0.9
FGFR1-232ENST00000527745 NMRK2Q9NPI5 230 aa9.42□□□□□ -0.9
FGFR1-232ENST00000527745 RNF181Q9P0P0 153 aa9.42□□□□□ -0.9
FGFR1-232ENST00000527745 KDM3BQ7LBC6 1761 aa9.42□□□□□ -0.9
FGFR1-232ENST00000527745 ARFGEF2Q9Y6D5 1785 aa9.42□□□□□ -0.9
FGFR1-232ENST00000527745 PCNTO95613 3336 aa9.41□□□□□ -0.9
FGFR1-232ENST00000527745 KCNQ3O43525 872 aa9.41□□□□□ -0.9
FGFR1-232ENST00000527745 IL6STP40189 918 aaPredicted RBP9.41□□□□□ -0.9
FGFR1-232ENST00000527745 TBC1D9BQ66K14 1250 aa9.41□□□□□ -0.9
FGFR1-232ENST00000527745 NPM2Q86SE8 214 aaKnown RBP9.41□□□□□ -0.9
FGFR1-232ENST00000527745 C2CD5Q86YS7 1000 aa9.41□□□□□ -0.9
FGFR1-232ENST00000527745 RTF1Q92541 710 aaKnown RBP9.41□□□□□ -0.9
FGFR1-232ENST00000527745 TBC1D2BQ9UPU7 963 aa9.41□□□□□ -0.9
FGFR1-232ENST00000527745 WDR90Q96KV7 1748 aa9.41□□□□□ -0.9
FGFR1-232ENST00000527745 DICER1Q9UPY3 1922 aaKnown RBP9.41□□□□□ -0.9
FGFR1-232ENST00000527745 FER1L6Q2WGJ9 1857 aa9.4□□□□□ -0.9
FGFR1-232ENST00000527745 KDM2BQ8NHM5 1336 aa9.4□□□□□ -0.9
FGFR1-232ENST00000527745 TOMM70O94826 608 aa9.4□□□□□ -0.9
FGFR1-232ENST00000527745 A1BGP04217 495 aa9.4□□□□□ -0.9
FGFR1-232ENST00000527745 RASSF7Q02833 373 aa9.4□□□□□ -0.9
FGFR1-232ENST00000527745 MCM10Q7L590 875 aa9.4□□□□□ -0.9
FGFR1-232ENST00000527745 TTLL6Q8N841 843 aa9.4□□□□□ -0.9
FGFR1-232ENST00000527745 H0YIN7 160 aa9.39□□□□□ -0.91
FGFR1-232ENST00000527745 NPHP1O15259 732 aa9.39□□□□□ -0.91
FGFR1-232ENST00000527745 DCTN1Q14203 1278 aa9.39□□□□□ -0.91
FGFR1-232ENST00000527745 C16orf71Q8IYS4 520 aaPredicted RBP9.39□□□□□ -0.91
FGFR1-232ENST00000527745 SLX4Q8IY92 1834 aa9.38□□□□□ -0.91
FGFR1-232ENST00000527745 ZC3H4Q9UPT8 1303 aaKnown RBP9.38□□□□□ -0.91
FGFR1-232ENST00000527745 PRAMEF22A3QJZ6 481 aa9.38□□□□□ -0.91
FGFR1-232ENST00000527745 CAMTA2O94983 1202 aa9.38□□□□□ -0.91
FGFR1-232ENST00000527745 LMNB1P20700 586 aa9.38□□□□□ -0.91
FGFR1-232ENST00000527745 PIP4K2AP48426 406 aaPredicted RBP9.38□□□□□ -0.91
FGFR1-232ENST00000527745 PRR5LQ6MZQ0 368 aa9.38□□□□□ -0.91
FGFR1-232ENST00000527745 DZIP3Q86Y13 1208 aaKnown RBP9.38□□□□□ -0.91
FGFR1-232ENST00000527745 CCDC24Q8N4L8 307 aa9.38□□□□□ -0.91
FGFR1-232ENST00000527745 CNBD1Q8NA66 436 aa9.38□□□□□ -0.91
FGFR1-232ENST00000527745 ZNF622Q969S3 477 aaKnown RBP eCLIP9.38□□□□□ -0.91
FGFR1-232ENST00000527745 SETDB2Q96T68 719 aa9.38□□□□□ -0.91
FGFR1-232ENST00000527745 NEFMP07197 916 aa9.37□□□□□ -0.91
FGFR1-232ENST00000527745 SNRPA1P09661 255 aaKnown RBP9.37□□□□□ -0.91
FGFR1-232ENST00000527745 PDE6BP35913 854 aa9.37□□□□□ -0.91
FGFR1-232ENST00000527745 APLP1P51693 650 aa9.37□□□□□ -0.91
FGFR1-232ENST00000527745 ST5P78524 1137 aa9.37□□□□□ -0.91
FGFR1-232ENST00000527745 RBM46Q8TBY0 533 aaKnown RBP9.37□□□□□ -0.91
FGFR1-232ENST00000527745 BRIP1Q9BX63 1249 aa9.37□□□□□ -0.91
FGFR1-232ENST00000527745 PDZRN3Q9UPQ7 1066 aa9.37□□□□□ -0.91
FGFR1-232ENST00000527745 USP16Q9Y5T5 823 aa9.37□□□□□ -0.91
FGFR1-232ENST00000527745 NUP98P52948 1817 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms