RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SYNMO15061 1565 aa18.07■□□□□ 0.48
USP47-207ENST00000527733 DIP2CQ9Y2E4 1556 aa18.07■□□□□ 0.48
USP47-207ENST00000527733 SLC3A2P08195 630 aaKnown RBP18.07■□□□□ 0.48
USP47-207ENST00000527733 IGHDP01880 384 aa18.06■□□□□ 0.48
USP47-207ENST00000527733 LINS1Q8NG48 757 aa18.06■□□□□ 0.48
USP47-207ENST00000527733 PCDHB15Q9Y5E8 787 aa18.06■□□□□ 0.48
USP47-207ENST00000527733 CYP46A1Q9Y6A2 500 aa18.06■□□□□ 0.48
USP47-207ENST00000527733 CCDC8Q9H0W5 538 aaPredicted RBP18.06■□□□□ 0.48
USP47-207ENST00000527733 INO80Q9ULG1 1556 aaPredicted RBP18.06■□□□□ 0.48
USP47-207ENST00000527733 BOLA2Q9H3K6 86 aa18.06■□□□□ 0.48
USP47-207ENST00000527733 USP6P35125 1406 aa18.05■□□□□ 0.48
USP47-207ENST00000527733 TPM4P67936 248 aa18.05■□□□□ 0.48
USP47-207ENST00000527733 GRM8O00222 908 aa18.05■□□□□ 0.48
USP47-207ENST00000527733 IDH1O75874 414 aaKnown RBP18.05■□□□□ 0.48
USP47-207ENST00000527733 SAFBQ15424 915 aaKnown RBP eCLIP18.05■□□□□ 0.48
USP47-207ENST00000527733 SKAP1Q86WV1 359 aa18.05■□□□□ 0.48
USP47-207ENST00000527733 ANKRD44Q8N8A2 993 aa18.05■□□□□ 0.48
USP47-207ENST00000527733 LRP2BPQ9P2M1 347 aa18.05■□□□□ 0.48
USP47-207ENST00000527733 ZNF790Q6PG37 636 aa18.04■□□□□ 0.48
USP47-207ENST00000527733 BLMP54132 1417 aaPredicted RBP18.04■□□□□ 0.48
USP47-207ENST00000527733 HOXB7P09629 217 aa18.04■□□□□ 0.48
USP47-207ENST00000527733 VPS53Q5VIR6 699 aa18.04■□□□□ 0.48
USP47-207ENST00000527733 CTNNA3Q9UI47 895 aa18.04■□□□□ 0.48
USP47-207ENST00000527733 LDHAL6AQ6ZMR3 332 aa18.04■□□□□ 0.48
USP47-207ENST00000527733 LGR6Q9HBX8 967 aa18.04■□□□□ 0.48
USP47-207ENST00000527733 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
USP47-207ENST00000527733 RAI14Q9P0K7 980 aa18.04■□□□□ 0.48
USP47-207ENST00000527733 RLBP1P12271 317 aa18.03■□□□□ 0.48
USP47-207ENST00000527733 RRP12Q5JTH9 1297 aaKnown RBP18.03■□□□□ 0.48
USP47-207ENST00000527733 ECHDC1Q9NTX5 307 aa18.03■□□□□ 0.48
USP47-207ENST00000527733 RFC4P35249 363 aa18.03■□□□□ 0.48
USP47-207ENST00000527733 CAVIN4Q5BKX8 364 aa18.03■□□□□ 0.48
USP47-207ENST00000527733 PIP4K2AP48426 406 aaPredicted RBP18.02■□□□□ 0.48
USP47-207ENST00000527733 TNNQ9UQP3 1299 aa18.02■□□□□ 0.48
USP47-207ENST00000527733 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.48
USP47-207ENST00000527733 JARID2Q92833 1246 aaPredicted RBP18.02■□□□□ 0.48
USP47-207ENST00000527733 ABCF2Q9UG63 623 aa18.02■□□□□ 0.48
USP47-207ENST00000527733 ANKRD1Q15327 319 aa18.02■□□□□ 0.47
USP47-207ENST00000527733 CDC5LQ99459 802 aaKnown RBP18.02■□□□□ 0.47
USP47-207ENST00000527733 CTDP1Q9Y5B0 961 aaPredicted RBP18.02■□□□□ 0.47
USP47-207ENST00000527733 PDCP20941 246 aa18.01■□□□□ 0.47
USP47-207ENST00000527733 ADGRB3O60242 1522 aa18.01■□□□□ 0.47
USP47-207ENST00000527733 BLOC1S2Q6QNY1 142 aa18.01■□□□□ 0.47
USP47-207ENST00000527733 E9PCH4 1651 aa18.01■□□□□ 0.47
USP47-207ENST00000527733 ATP8B2P98198 1209 aa18.01■□□□□ 0.47
USP47-207ENST00000527733 KRT32Q14532 448 aa18.01■□□□□ 0.47
USP47-207ENST00000527733 SLC5A1P13866 664 aa18■□□□□ 0.47
USP47-207ENST00000527733 AGLP35573 1532 aa18■□□□□ 0.47
USP47-207ENST00000527733 MSNP26038 577 aaKnown RBP18■□□□□ 0.47
USP47-207ENST00000527733 BMP2KLQ5H9B9 411 aa18■□□□□ 0.47
USP47-207ENST00000527733 ARHGEF25Q86VW2 580 aa18■□□□□ 0.47
USP47-207ENST00000527733 RHPN1Q8TCX5 695 aa18■□□□□ 0.47
USP47-207ENST00000527733 SLC52A2Q9HAB3 445 aa18■□□□□ 0.47
USP47-207ENST00000527733 GLI2P10070 1586 aa18■□□□□ 0.47
USP47-207ENST00000527733 CEP152O94986 1710 aa18■□□□□ 0.47
USP47-207ENST00000527733 XBP1P17861 261 aa17.99■□□□□ 0.47
USP47-207ENST00000527733 RPGRQ92834 1020 aaKnown RBP17.99■□□□□ 0.47
USP47-207ENST00000527733 BCL11BQ9C0K0 894 aaPredicted RBP17.99■□□□□ 0.47
USP47-207ENST00000527733 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
USP47-207ENST00000527733 FOSBP53539 338 aa17.99■□□□□ 0.47
USP47-207ENST00000527733 AIDAQ96BJ3 306 aa17.99■□□□□ 0.47
USP47-207ENST00000527733 TRPM1Q7Z4N2 1603 aa17.98■□□□□ 0.47
USP47-207ENST00000527733 ALKQ9UM73 1620 aa17.98■□□□□ 0.47
USP47-207ENST00000527733 NUCB1Q02818 461 aa17.98■□□□□ 0.47
USP47-207ENST00000527733 CHAF1AQ13111 956 aaPredicted RBP17.98■□□□□ 0.47
USP47-207ENST00000527733 ZBTB40Q9NUA8 1239 aa17.98■□□□□ 0.47
USP47-207ENST00000527733 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.98■□□□□ 0.47
USP47-207ENST00000527733 ANKIB1Q9P2G1 1089 aa17.98■□□□□ 0.47
USP47-207ENST00000527733 ZNF335Q9H4Z2 1342 aaPredicted RBP17.98■□□□□ 0.47
USP47-207ENST00000527733 TDO2P48775 406 aa17.98■□□□□ 0.47
USP47-207ENST00000527733 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
USP47-207ENST00000527733 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
USP47-207ENST00000527733 BICD2Q8TD16 824 aa17.98■□□□□ 0.47
USP47-207ENST00000527733 K7ELQ4 463 aaPredicted RBP17.97■□□□□ 0.47
USP47-207ENST00000527733 NBPF5PQ86XG9 351 aaPredicted RBP17.97■□□□□ 0.47
USP47-207ENST00000527733 JAKMIP1Q96N16 626 aaKnown RBP17.97■□□□□ 0.47
USP47-207ENST00000527733 ANKARQ7Z5J8 1434 aa17.97■□□□□ 0.47
USP47-207ENST00000527733 CWF19L2Q2TBE0 894 aaKnown RBP17.96■□□□□ 0.47
USP47-207ENST00000527733 DDX46Q7L014 1031 aaKnown RBP17.96■□□□□ 0.47
USP47-207ENST00000527733 G2E3Q7L622 706 aa17.96■□□□□ 0.47
USP47-207ENST00000527733 CLSTN1O94985 981 aa17.96■□□□□ 0.47
USP47-207ENST00000527733 CCDC152Q4G0S7 254 aa17.96■□□□□ 0.47
USP47-207ENST00000527733 MAP3K12Q12852 859 aa17.96■□□□□ 0.47
USP47-207ENST00000527733 EVI5LQ96CN4 794 aa17.96■□□□□ 0.47
USP47-207ENST00000527733 MTMR7Q9Y216 660 aa17.96■□□□□ 0.47
USP47-207ENST00000527733 ABCA6Q8N139 1617 aa17.96■□□□□ 0.47
USP47-207ENST00000527733 SETDB2Q96T68 719 aa17.95■□□□□ 0.46
USP47-207ENST00000527733 CAMSAP1Q5T5Y3 1602 aa17.95■□□□□ 0.46
USP47-207ENST00000527733 PPRC1Q5VV67 1664 aaKnown RBP17.95■□□□□ 0.46
USP47-207ENST00000527733 KIDINS220Q9ULH0 1771 aa17.95■□□□□ 0.46
USP47-207ENST00000527733 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
USP47-207ENST00000527733 BRMS1Q9HCU9 246 aa17.95■□□□□ 0.46
USP47-207ENST00000527733 NIP7Q9Y221 180 aaKnown RBP eCLIP17.95■□□□□ 0.46
USP47-207ENST00000527733 KIAA2012Q0VF49 1180 aa17.94■□□□□ 0.46
USP47-207ENST00000527733 IMMTQ16891 758 aaKnown RBP17.94■□□□□ 0.46
USP47-207ENST00000527733 IL17REQ8NFR9 667 aa17.94■□□□□ 0.46
USP47-207ENST00000527733 PDRG1Q9NUG6 133 aa17.94■□□□□ 0.46
USP47-207ENST00000527733 DIP2BQ9P265 1576 aa17.94■□□□□ 0.46
USP47-207ENST00000527733 RTL1A6NKG5 1358 aa17.94■□□□□ 0.46
USP47-207ENST00000527733 KIF24Q5T7B8 1368 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms