RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 PSME1Q06323 249 aa8.31□□□□□ -1.08
LINC01001-202ENST00000527683 TIMELESSQ9UNS1 1208 aa8.31□□□□□ -1.08
LINC01001-202ENST00000527683 NHSL1Q5SYE7 1610 aa8.31□□□□□ -1.08
LINC01001-202ENST00000527683 PXDNQ92626 1479 aa8.31□□□□□ -1.08
LINC01001-202ENST00000527683 DXOO77932 396 aaKnown RBP8.3□□□□□ -1.08
LINC01001-202ENST00000527683 KRT27Q7Z3Y8 459 aa8.3□□□□□ -1.08
LINC01001-202ENST00000527683 CLTCL1P53675 1640 aa8.29□□□□□ -1.08
LINC01001-202ENST00000527683 Q3C1V9 767 aa8.29□□□□□ -1.08
LINC01001-202ENST00000527683 CFAP70Q5T0N1 1121 aa8.29□□□□□ -1.08
LINC01001-202ENST00000527683 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
LINC01001-202ENST00000527683 LIMD1Q9UGP4 676 aa8.29□□□□□ -1.08
LINC01001-202ENST00000527683 ANKRD30BQ9BXX2 1392 aa8.29□□□□□ -1.08
LINC01001-202ENST00000527683 RALGAPBQ86X10 1494 aa8.29□□□□□ -1.08
LINC01001-202ENST00000527683 SLIT2O94813 1529 aa8.29□□□□□ -1.08
LINC01001-202ENST00000527683 TECPR2O15040 1411 aa8.29□□□□□ -1.08
LINC01001-202ENST00000527683 BLMP54132 1417 aaPredicted RBP8.29□□□□□ -1.08
LINC01001-202ENST00000527683 SPTLC1O15269 473 aa8.28□□□□□ -1.08
LINC01001-202ENST00000527683 SF3B2Q13435 895 aaKnown RBP8.28□□□□□ -1.08
LINC01001-202ENST00000527683 MYSM1Q5VVJ2 828 aa8.28□□□□□ -1.08
LINC01001-202ENST00000527683 CCDC9Q9Y3X0 531 aaKnown RBP8.28□□□□□ -1.08
LINC01001-202ENST00000527683 LAMC1P11047 1609 aa8.28□□□□□ -1.08
LINC01001-202ENST00000527683 SPATA31E1Q6ZUB1 1445 aa8.28□□□□□ -1.08
LINC01001-202ENST00000527683 PLEKHG3A1L390 1219 aa8.27□□□□□ -1.09
LINC01001-202ENST00000527683 GFRA3O60609 400 aa8.27□□□□□ -1.09
LINC01001-202ENST00000527683 SAFB2Q14151 953 aaKnown RBP eCLIP8.27□□□□□ -1.09
LINC01001-202ENST00000527683 ZNF598Q86UK7 904 aaKnown RBP8.27□□□□□ -1.09
LINC01001-202ENST00000527683 PMFBP1Q8TBY8 1022 aa8.27□□□□□ -1.09
LINC01001-202ENST00000527683 PRAM1Q96QH2 718 aa8.27□□□□□ -1.09
LINC01001-202ENST00000527683 FAM117AQ9C073 453 aa8.27□□□□□ -1.09
LINC01001-202ENST00000527683 SBNO1A3KN83 1393 aa8.26□□□□□ -1.09
LINC01001-202ENST00000527683 GDF9O60383 454 aa8.26□□□□□ -1.09
LINC01001-202ENST00000527683 PTCRAQ6ISU1 281 aaPredicted RBP8.26□□□□□ -1.09
LINC01001-202ENST00000527683 RETREG3Q86VR2 466 aa8.26□□□□□ -1.09
LINC01001-202ENST00000527683 KDM4CQ9H3R0 1056 aa8.26□□□□□ -1.09
LINC01001-202ENST00000527683 PKD2L1Q9P0L9 805 aa8.26□□□□□ -1.09
LINC01001-202ENST00000527683 SRCAPQ6ZRS2 3230 aa8.25□□□□□ -1.09
LINC01001-202ENST00000527683 QPCTQ16769 361 aa8.25□□□□□ -1.09
LINC01001-202ENST00000527683 RIC3Q7Z5B4 369 aa8.25□□□□□ -1.09
LINC01001-202ENST00000527683 BTG4Q9NY30 223 aa8.25□□□□□ -1.09
LINC01001-202ENST00000527683 CCDC144AA2RUR9 1427 aa8.25□□□□□ -1.09
LINC01001-202ENST00000527683 YTHDC2Q9H6S0 1430 aaKnown RBP8.25□□□□□ -1.09
LINC01001-202ENST00000527683 NALCNQ8IZF0 1738 aa8.25□□□□□ -1.09
LINC01001-202ENST00000527683 CFAP99D6REC4 459 aa8.24□□□□□ -1.09
LINC01001-202ENST00000527683 C6orf229H3BNL8 230 aa8.24□□□□□ -1.09
LINC01001-202ENST00000527683 JUNDP17535 347 aa8.24□□□□□ -1.09
LINC01001-202ENST00000527683 BAG6P46379 1132 aa8.24□□□□□ -1.09
LINC01001-202ENST00000527683 FAM182BQ5T319 152 aa8.24□□□□□ -1.09
LINC01001-202ENST00000527683 ZNF697Q5TEC3 545 aa8.24□□□□□ -1.09
LINC01001-202ENST00000527683 POGKQ9P215 609 aa8.24□□□□□ -1.09
LINC01001-202ENST00000527683 SPHKAPQ2M3C7 1700 aa8.23□□□□□ -1.09
LINC01001-202ENST00000527683 PIK3C2GO75747 1445 aa8.23□□□□□ -1.09
LINC01001-202ENST00000527683 COL22A1Q8NFW1 1626 aaPredicted RBP8.23□□□□□ -1.09
LINC01001-202ENST00000527683 GJA5P36382 358 aa8.23□□□□□ -1.09
LINC01001-202ENST00000527683 PRR7Q8TB68 274 aa8.23□□□□□ -1.09
LINC01001-202ENST00000527683 PDZRN3Q9UPQ7 1066 aa8.23□□□□□ -1.09
LINC01001-202ENST00000527683 ARHGEF10O15013 1369 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 TONSLQ96HA7 1378 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 TNS3Q68CZ2 1445 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 RPIAP49247 311 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 MYT1Q01538 1121 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 TPRNQ4KMQ1 711 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 HIRIP3Q9BW71 556 aaPredicted RBP8.22□□□□□ -1.09
LINC01001-202ENST00000527683 TRAK1Q9UPV9 953 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 SPATA31A5Q5VU36 1347 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 SPATA31A7Q8IWB4 1347 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 PRR36Q9H6K5 1346 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 GLI3P10071 1580 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 CDC42BPGQ6DT37 1551 aa8.22□□□□□ -1.09
LINC01001-202ENST00000527683 TNFRSF10AO00220 468 aa8.21□□□□□ -1.1
LINC01001-202ENST00000527683 WASLO00401 505 aaPredicted RBP8.21□□□□□ -1.1
LINC01001-202ENST00000527683 SKOR1P84550 965 aa8.21□□□□□ -1.1
LINC01001-202ENST00000527683 MTMR2Q13614 643 aa8.21□□□□□ -1.1
LINC01001-202ENST00000527683 R3HDM1Q15032 1099 aaKnown RBP8.21□□□□□ -1.1
LINC01001-202ENST00000527683 EZH2Q15910 746 aaKnown RBP8.21□□□□□ -1.1
LINC01001-202ENST00000527683 CSPP1Q1MSJ5 1256 aa8.21□□□□□ -1.1
LINC01001-202ENST00000527683 RTL5Q5HYW3 569 aaPredicted RBP8.21□□□□□ -1.1
LINC01001-202ENST00000527683 CAMKK2Q96RR4 588 aa8.21□□□□□ -1.1
LINC01001-202ENST00000527683 POLR3EQ9NVU0 708 aa8.21□□□□□ -1.1
LINC01001-202ENST00000527683 NRG2O14511 850 aaPredicted RBP8.2□□□□□ -1.1
LINC01001-202ENST00000527683 FAM196AQ6ZSG2 479 aa8.2□□□□□ -1.1
LINC01001-202ENST00000527683 PROCA1Q8NCQ7 364 aaPredicted RBP8.2□□□□□ -1.1
LINC01001-202ENST00000527683 NGDNQ8NEJ9 315 aaKnown RBP8.2□□□□□ -1.1
LINC01001-202ENST00000527683 GPRASP1Q5JY77 1395 aa8.2□□□□□ -1.1
LINC01001-202ENST00000527683 NRXN1Q9ULB1 1477 aa8.19□□□□□ -1.1
LINC01001-202ENST00000527683 PER1O15534 1290 aaPredicted RBP8.19□□□□□ -1.1
LINC01001-202ENST00000527683 LILRB3O75022 631 aa8.19□□□□□ -1.1
LINC01001-202ENST00000527683 TRIM37O94972 964 aa8.19□□□□□ -1.1
LINC01001-202ENST00000527683 PRKCSHP14314 528 aaPredicted RBP8.19□□□□□ -1.1
LINC01001-202ENST00000527683 CCDC24Q8N4L8 307 aa8.19□□□□□ -1.1
LINC01001-202ENST00000527683 PRDM11Q9NQV5 511 aa8.19□□□□□ -1.1
LINC01001-202ENST00000527683 BRPF1P55201 1214 aaPredicted RBP8.18□□□□□ -1.1
LINC01001-202ENST00000527683 PRR20EP86478 221 aa8.18□□□□□ -1.1
LINC01001-202ENST00000527683 PRR20CP86479 221 aa8.18□□□□□ -1.1
LINC01001-202ENST00000527683 PRR20DP86480 221 aa8.18□□□□□ -1.1
LINC01001-202ENST00000527683 PRR20BP86481 221 aa8.18□□□□□ -1.1
LINC01001-202ENST00000527683 PRR20AP86496 221 aa8.18□□□□□ -1.1
LINC01001-202ENST00000527683 FOXC1Q12948 553 aa8.18□□□□□ -1.1
LINC01001-202ENST00000527683 TRIM32Q13049 653 aa8.18□□□□□ -1.1
LINC01001-202ENST00000527683 CHRNA2Q15822 529 aa8.18□□□□□ -1.1
LINC01001-202ENST00000527683 Q6ZNB5 142 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms