RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 MNS1Q8NEH6 495 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 SLC26A8Q96RN1 970 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 FAM53CQ9NYF3 392 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 ERICH4A6NGS2 130 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 REC8O95072 547 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 CUL4AQ13619 759 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 ICE2Q659A1 982 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 ANKRD23Q86SG2 305 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 SIRT2Q8IXJ6 389 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 HS6ST3Q8IZP7 471 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 AFAP1Q8N556 730 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 ZNF397Q8NF99 534 aaPredicted RBP8.9□□□□□ -0.98
SOX6-208ENST00000527619 PAXBP1Q9Y5B6 917 aa8.9□□□□□ -0.98
SOX6-208ENST00000527619 PIK3R4Q99570 1358 aa8.9□□□□□ -0.99
SOX6-208ENST00000527619 MYOM2P54296 1465 aa8.9□□□□□ -0.99
SOX6-208ENST00000527619 TMEM87AQ8NBN3 555 aa8.89□□□□□ -0.99
SOX6-208ENST00000527619 INTS4Q96HW7 963 aaKnown RBP8.89□□□□□ -0.99
SOX6-208ENST00000527619 RSPH14Q9UHP6 348 aa8.89□□□□□ -0.99
SOX6-208ENST00000527619 TRIM35Q9UPQ4 493 aa8.89□□□□□ -0.99
SOX6-208ENST00000527619 MYO3AQ8NEV4 1616 aa8.89□□□□□ -0.99
SOX6-208ENST00000527619 TMPOP42166 694 aaKnown RBP8.89□□□□□ -0.99
SOX6-208ENST00000527619 SPC24Q8NBT2 197 aa8.89□□□□□ -0.99
SOX6-208ENST00000527619 CCDC112Q8NEF3 446 aa8.89□□□□□ -0.99
SOX6-208ENST00000527619 GDPD2Q9HCC8 539 aa8.89□□□□□ -0.99
SOX6-208ENST00000527619 PTPRTO14522 1441 aa8.89□□□□□ -0.99
SOX6-208ENST00000527619 AP5Z1O43299 807 aa8.88□□□□□ -0.99
SOX6-208ENST00000527619 DHX16O60231 1041 aaKnown RBP8.88□□□□□ -0.99
SOX6-208ENST00000527619 TNNT1P13805 278 aa8.88□□□□□ -0.99
SOX6-208ENST00000527619 SPTY2D1Q68D10 685 aaPredicted RBP8.88□□□□□ -0.99
SOX6-208ENST00000527619 TRAPPC8Q9Y2L5 1435 aa8.88□□□□□ -0.99
SOX6-208ENST00000527619 TRPM2O94759 1503 aa8.88□□□□□ -0.99
SOX6-208ENST00000527619 GUCY2CP25092 1073 aa8.88□□□□□ -0.99
SOX6-208ENST00000527619 DNAJC21Q5F1R6 531 aaKnown RBP8.88□□□□□ -0.99
SOX6-208ENST00000527619 LRCH2Q5VUJ6 765 aa8.88□□□□□ -0.99
SOX6-208ENST00000527619 PAIP2Q9BPZ3 127 aaKnown RBP8.88□□□□□ -0.99
SOX6-208ENST00000527619 RIPOR2Q9Y4F9 1068 aa8.88□□□□□ -0.99
SOX6-208ENST00000527619 PTCH1Q13635 1447 aa8.88□□□□□ -0.99
SOX6-208ENST00000527619 NRDCO43847 1150 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 ATXN8OSP0DMR3 200 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 NEK4P51957 841 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 NAA30Q147X3 362 aaPredicted RBP8.87□□□□□ -0.99
SOX6-208ENST00000527619 C16orf45Q96MC5 204 aaPredicted RBP8.87□□□□□ -0.99
SOX6-208ENST00000527619 FUCA2Q9BTY2 467 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 MED4Q9NPJ6 270 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.87□□□□□ -0.997e-8■■■■■ 186.3
SOX6-208ENST00000527619 WDR33Q9C0J8 1336 aaKnown RBP8.87□□□□□ -0.99
SOX6-208ENST00000527619 SBNO2Q9Y2G9 1366 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 ERC2O15083 957 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 SDSP20132 328 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 ARHGAP45Q92619 1136 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 PLEKHF1Q96S99 279 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 ABCA6Q8N139 1617 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 SYCP2Q9BX26 1530 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 PPP1R12AO14974 1030 aaPredicted RBP8.87□□□□□ -0.99
SOX6-208ENST00000527619 PTGS1P23219 599 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 CYP2C19P33261 490 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 BIRC2Q13490 618 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 KMT5BQ4FZB7 885 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 PIK3R5Q8WYR1 880 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 IFT57Q9NWB7 429 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 SUFUQ9UMX1 484 aa8.87□□□□□ -0.99
SOX6-208ENST00000527619 UBE2HP62256 183 aa8.86□□□□□ -0.99
SOX6-208ENST00000527619 ZC3H12AQ5D1E8 599 aaKnown RBP8.86□□□□□ -0.99
SOX6-208ENST00000527619 FAM210AQ96ND0 272 aa8.86□□□□□ -0.99
SOX6-208ENST00000527619 NBPF3Q9H094 633 aa8.86□□□□□ -0.99
SOX6-208ENST00000527619 INO80Q9ULG1 1556 aaPredicted RBP8.86□□□□□ -0.99
SOX6-208ENST00000527619 TCHHQ07283 1943 aa8.86□□□□□ -0.99
SOX6-208ENST00000527619 POGZQ7Z3K3 1410 aa8.86□□□□□ -0.99
SOX6-208ENST00000527619 RPAP1Q9BWH6 1393 aaPredicted RBP8.86□□□□□ -0.99
SOX6-208ENST00000527619 SPAG9O60271 1321 aaKnown RBP8.86□□□□□ -0.99
SOX6-208ENST00000527619 CCDC189A1A4V9 331 aa8.86□□□□□ -0.99
SOX6-208ENST00000527619 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.86□□□□□ -0.99
SOX6-208ENST00000527619 KIF1BPQ96EK5 621 aa8.86□□□□□ -0.99
SOX6-208ENST00000527619 NOL10Q9BSC4 688 aaKnown RBP8.86□□□□□ -0.99
SOX6-208ENST00000527619 DCTPP1Q9H773 170 aa8.86□□□□□ -0.99
SOX6-208ENST00000527619 ATAD2Q6PL18 1390 aa8.85□□□□□ -0.99
SOX6-208ENST00000527619 HNRNPH2P55795 449 aaKnown RBP8.85□□□□□ -0.99
SOX6-208ENST00000527619 SLFNL1Q499Z3 407 aa8.85□□□□□ -0.99
SOX6-208ENST00000527619 TSPAN18Q96SJ8 248 aa8.85□□□□□ -0.99
SOX6-208ENST00000527619 ABCC1P33527 1531 aa8.85□□□□□ -0.99
SOX6-208ENST00000527619 ABCC4O15439 1325 aa8.85□□□□□ -0.99
SOX6-208ENST00000527619 RAD51AP2Q09MP3 1159 aa8.85□□□□□ -0.99
SOX6-208ENST00000527619 C16orf71Q8IYS4 520 aaPredicted RBP8.85□□□□□ -0.99
SOX6-208ENST00000527619 MRPL50Q8N5N7 158 aaKnown RBP8.85□□□□□ -0.99
SOX6-208ENST00000527619 EVI5LQ96CN4 794 aa8.85□□□□□ -0.99
SOX6-208ENST00000527619 TRERF1Q96PN7 1200 aa8.85□□□□□ -0.99
SOX6-208ENST00000527619 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.85□□□□□ -0.99
SOX6-208ENST00000527619 KNDC1Q76NI1 1749 aa8.85□□□□□ -0.99
SOX6-208ENST00000527619 KLHL33A6NCF5 533 aa8.84□□□□□ -0.99
SOX6-208ENST00000527619 U2SURPO15042 1029 aaKnown RBP8.84□□□□□ -0.99
SOX6-208ENST00000527619 RBM6P78332 1123 aaKnown RBP8.84□□□□□ -0.99
SOX6-208ENST00000527619 SETDB1Q15047 1291 aa8.84□□□□□ -0.99
SOX6-208ENST00000527619 CEP135Q66GS9 1140 aa8.84□□□□□ -0.99
SOX6-208ENST00000527619 GIMAP6Q6P9H5 292 aa8.84□□□□□ -0.99
SOX6-208ENST00000527619 SRCIN1Q9C0H9 1055 aa8.84□□□□□ -0.99
SOX6-208ENST00000527619 RTL1A6NKG5 1358 aa8.84□□□□□ -0.99
SOX6-208ENST00000527619 NSD2O96028 1365 aa8.84□□□□□ -0.99
SOX6-208ENST00000527619 TPD52L1Q16890 204 aaPredicted RBP8.84□□□□□ -0.99
SOX6-208ENST00000527619 RASSF4Q9H2L5 321 aa8.84□□□□□ -0.99
SOX6-208ENST00000527619 CNPY2Q9Y2B0 182 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms