RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 PLA2G4AP47712 749 aa6.81□□□□□ -1.32
CLNS1A-209ENST00000527299 TNP2Q05952 138 aa6.81□□□□□ -1.32
CLNS1A-209ENST00000527299 USP4Q13107 963 aa6.81□□□□□ -1.32
CLNS1A-209ENST00000527299 TSGA10IPQ3SY00 556 aa6.81□□□□□ -1.32
CLNS1A-209ENST00000527299 PHTF2Q8N3S3 785 aa6.81□□□□□ -1.32
CLNS1A-209ENST00000527299 MTMR14Q8NCE2 650 aa6.81□□□□□ -1.32
CLNS1A-209ENST00000527299 TRIM11Q96F44 468 aa6.81□□□□□ -1.32
CLNS1A-209ENST00000527299 SPATA31C1P0DKV0 1188 aa6.8□□□□□ -1.32
CLNS1A-209ENST00000527299 MAPTP10636 758 aaKnown RBP6.8□□□□□ -1.32
CLNS1A-209ENST00000527299 PLVAPQ9BX97 442 aa6.8□□□□□ -1.32
CLNS1A-209ENST00000527299 RSPO4Q2I0M5 234 aaPredicted RBP6.79□□□□□ -1.32
CLNS1A-209ENST00000527299 CD33P20138 364 aa6.78□□□□□ -1.32
CLNS1A-209ENST00000527299 SCNN1DP51172 638 aa6.78□□□□□ -1.32
CLNS1A-209ENST00000527299 NKAPLQ5M9Q1 402 aa6.78□□□□□ -1.32
CLNS1A-209ENST00000527299 NIFKQ9BYG3 293 aaKnown RBP6.78□□□□□ -1.32
CLNS1A-209ENST00000527299 CHIC2Q9UKJ5 165 aa6.78□□□□□ -1.32
CLNS1A-209ENST00000527299 DOLKQ9UPQ8 538 aa6.78□□□□□ -1.32
CLNS1A-209ENST00000527299 A0A1W2PNR3 127 aa6.77□□□□□ -1.33
CLNS1A-209ENST00000527299 DCDC2BA2VCK2 349 aa6.77□□□□□ -1.33
CLNS1A-209ENST00000527299 INHAP05111 366 aa6.77□□□□□ -1.33
CLNS1A-209ENST00000527299 FOXD4L6Q3SYB3 417 aaPredicted RBP6.77□□□□□ -1.33
CLNS1A-209ENST00000527299 ZNF468Q5VIY5 522 aaPredicted RBP6.77□□□□□ -1.33
CLNS1A-209ENST00000527299 FOXD4L3Q6VB84 417 aaPredicted RBP6.77□□□□□ -1.33
CLNS1A-209ENST00000527299 KRTAP1-3Q8IUG1 177 aa6.77□□□□□ -1.33
CLNS1A-209ENST00000527299 KHNYNO15037 678 aaKnown RBP6.76□□□□□ -1.33
CLNS1A-209ENST00000527299 FAM157BP0CG42 384 aa6.76□□□□□ -1.33
CLNS1A-209ENST00000527299 GDF10P55107 478 aa6.76□□□□□ -1.33
CLNS1A-209ENST00000527299 ZNF295-AS1Q8N0V1 137 aa6.76□□□□□ -1.33
CLNS1A-209ENST00000527299 AIDAQ96BJ3 306 aa6.76□□□□□ -1.33
CLNS1A-209ENST00000527299 SIRT1Q96EB6 747 aa6.76□□□□□ -1.33
CLNS1A-209ENST00000527299 APBB1O00213 710 aa6.75□□□□□ -1.33
CLNS1A-209ENST00000527299 SMTNP53814 917 aa6.75□□□□□ -1.33
CLNS1A-209ENST00000527299 PCBP4P57723 403 aaKnown RBP6.75□□□□□ -1.33
CLNS1A-209ENST00000527299 MDFIQ99750 246 aa6.75□□□□□ -1.33
CLNS1A-209ENST00000527299 SNRKQ9NRH2 765 aa6.75□□□□□ -1.33
CLNS1A-209ENST00000527299 TPSG1Q9NRR2 321 aa6.75□□□□□ -1.33
CLNS1A-209ENST00000527299 OXLD1Q5BKU9 147 aa6.74□□□□□ -1.33
CLNS1A-209ENST00000527299 ARSJQ5FYB0 599 aaPredicted RBP6.74□□□□□ -1.33
CLNS1A-209ENST00000527299 IL27Q8NEV9 243 aa6.74□□□□□ -1.33
CLNS1A-209ENST00000527299 ZIC5Q96T25 663 aa6.74□□□□□ -1.33
CLNS1A-209ENST00000527299 ZDHHC3Q9NYG2 299 aa6.74□□□□□ -1.33
CLNS1A-209ENST00000527299 PRR12Q9ULL5 1215 aa6.74□□□□□ -1.33
CLNS1A-209ENST00000527299 ELOA3CA0A087WX78 387 aaPredicted RBP6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 SPDYE3A6NKU9 549 aa6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 ELOA3DA6NLF2 546 aaPredicted RBP6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 EFSO43281 561 aa6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 EIF4G2P78344 907 aaKnown RBP eCLIP6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 LAMC2Q13753 1193 aa6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 NBPF1Q3BBV0 1214 aa6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 ELOA3BQ3SY89 546 aa6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 SLFNL1Q499Z3 407 aa6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 SAMD5Q5TGI4 173 aa6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 ELOA3Q8NG57 546 aa6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 KRTAP4-12Q9BQ66 201 aa6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 STRN4Q9NRL3 753 aa6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 IQSEC3Q9UPP2 1182 aaPredicted RBP6.73□□□□□ -1.33
CLNS1A-209ENST00000527299 SCO2A0A1W2PP80 73 aa6.72□□□□□ -1.33
CLNS1A-209ENST00000527299 DYRK3O43781 588 aa6.72□□□□□ -1.33
CLNS1A-209ENST00000527299 TATP17735 454 aaPredicted RBP6.72□□□□□ -1.33
CLNS1A-209ENST00000527299 MTFR1Q15390 333 aa6.72□□□□□ -1.33
CLNS1A-209ENST00000527299 SLC4A9Q96Q91 983 aa6.72□□□□□ -1.33
CLNS1A-209ENST00000527299 MARK1Q9P0L2 795 aa6.72□□□□□ -1.33
CLNS1A-209ENST00000527299 CDK2AP1O14519 115 aa6.71□□□□□ -1.34
CLNS1A-209ENST00000527299 COL9A3Q14050 684 aaPredicted RBP6.71□□□□□ -1.34
CLNS1A-209ENST00000527299 PRRT3Q5FWE3 981 aa6.71□□□□□ -1.34
CLNS1A-209ENST00000527299 ARTNQ5T4W7 220 aa6.71□□□□□ -1.34
CLNS1A-209ENST00000527299 ZFP64Q9NPA5 681 aa6.71□□□□□ -1.34
CLNS1A-209ENST00000527299 TMEM229AB2RXF0 380 aa6.7□□□□□ -1.34
CLNS1A-209ENST00000527299 APBA3O96018 575 aa6.7□□□□□ -1.34
CLNS1A-209ENST00000527299 ALAS2P22557 587 aa6.7□□□□□ -1.34
CLNS1A-209ENST00000527299 USP3Q9Y6I4 520 aa6.7□□□□□ -1.34
CLNS1A-209ENST00000527299 A6NJY4 79 aa6.69□□□□□ -1.34
CLNS1A-209ENST00000527299 ADARB2-AS1A8MUL3 147 aa6.69□□□□□ -1.34
CLNS1A-209ENST00000527299 IRF5Q13568 498 aa6.69□□□□□ -1.34
CLNS1A-209ENST00000527299 MAP7D1Q3KQU3 841 aa6.69□□□□□ -1.34
CLNS1A-209ENST00000527299 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
CLNS1A-209ENST00000527299 SYT9Q86SS6 491 aa6.69□□□□□ -1.34
CLNS1A-209ENST00000527299 PRDM6Q9NQX0 595 aa6.69□□□□□ -1.34
CLNS1A-209ENST00000527299 SERTAD1Q9UHV2 236 aa6.69□□□□□ -1.34
CLNS1A-209ENST00000527299 TBC1D2BQ9UPU7 963 aa6.69□□□□□ -1.34
CLNS1A-209ENST00000527299 GJA3Q9Y6H8 435 aa6.69□□□□□ -1.34
CLNS1A-209ENST00000527299 SIN3BO75182 1162 aa6.68□□□□□ -1.34
CLNS1A-209ENST00000527299 CABP1Q9NZU7 370 aa6.68□□□□□ -1.34
CLNS1A-209ENST00000527299 M0R082 166 aa6.67□□□□□ -1.34
CLNS1A-209ENST00000527299 PRSS36Q5K4E3 855 aa6.67□□□□□ -1.34
CLNS1A-209ENST00000527299 ZNF417Q8TAU3 575 aa6.67□□□□□ -1.34
CLNS1A-209ENST00000527299 TNFRSF25Q93038 417 aa6.67□□□□□ -1.34
CLNS1A-209ENST00000527299 NACC1Q96RE7 527 aa6.67□□□□□ -1.34
CLNS1A-209ENST00000527299 ZNF587Q96SQ5 575 aaPredicted RBP6.67□□□□□ -1.34
CLNS1A-209ENST00000527299 STARD13Q9Y3M8 1113 aa6.67□□□□□ -1.34
CLNS1A-209ENST00000527299 FAM229AH3BQW9 127 aa6.66□□□□□ -1.34
CLNS1A-209ENST00000527299 TXLNAP40222 546 aa6.66□□□□□ -1.34
CLNS1A-209ENST00000527299 NEUROD2Q15784 382 aa6.66□□□□□ -1.34
CLNS1A-209ENST00000527299 BICDL1Q6ZP65 573 aa6.66□□□□□ -1.34
CLNS1A-209ENST00000527299 PLPP7Q8NBV4 271 aa6.66□□□□□ -1.34
CLNS1A-209ENST00000527299 TRIM28Q13263 835 aaKnown RBP6.65□□□□□ -1.34
CLNS1A-209ENST00000527299 MICALL1Q8N3F8 863 aa6.65□□□□□ -1.34
CLNS1A-209ENST00000527299 ZDHHC1Q8WTX9 485 aa6.65□□□□□ -1.34
CLNS1A-209ENST00000527299 PARP3Q9Y6F1 533 aa6.65□□□□□ -1.34
CLNS1A-209ENST00000527299 ALBP02768 609 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms