RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CHPF2Q9P2E5 772 aa23.9■■□□□ 1.42
SMPD1-203ENST00000527275 NHSQ6T4R5 1651 aa23.9■■□□□ 1.42
SMPD1-203ENST00000527275 KIF16BQ96L93 1317 aa23.89■■□□□ 1.42
SMPD1-203ENST00000527275 CHMP4AQ9BY43 222 aa23.89■■□□□ 1.42
SMPD1-203ENST00000527275 VSIG10Q8N0Z9 540 aa23.89■■□□□ 1.41
SMPD1-203ENST00000527275 PALLDQ8WX93 1383 aa23.88■■□□□ 1.41
SMPD1-203ENST00000527275 ZKSCAN2Q63HK3 967 aa23.88■■□□□ 1.41
SMPD1-203ENST00000527275 COG6Q9Y2V7 657 aa23.88■■□□□ 1.41
SMPD1-203ENST00000527275 ANXA1P04083 346 aa23.87■■□□□ 1.41
SMPD1-203ENST00000527275 G2E3Q7L622 706 aa23.87■■□□□ 1.41
SMPD1-203ENST00000527275 SMARCC1Q92922 1105 aaPredicted RBP23.87■■□□□ 1.41
SMPD1-203ENST00000527275 BCL11BQ9C0K0 894 aaPredicted RBP23.87■■□□□ 1.41
SMPD1-203ENST00000527275 TNNQ9UQP3 1299 aa23.87■■□□□ 1.41
SMPD1-203ENST00000527275 BTAF1O14981 1849 aa23.87■■□□□ 1.41
SMPD1-203ENST00000527275 DBF4Q9UBU7 674 aaPredicted RBP23.86■■□□□ 1.41
SMPD1-203ENST00000527275 RBM19Q9Y4C8 960 aaKnown RBP23.86■■□□□ 1.41
SMPD1-203ENST00000527275 TRIM37O94972 964 aa23.86■■□□□ 1.41
SMPD1-203ENST00000527275 TRIM27P14373 513 aa23.86■■□□□ 1.41
SMPD1-203ENST00000527275 DNAJC10Q8IXB1 793 aa23.86■■□□□ 1.41
SMPD1-203ENST00000527275 LOC102724428A0A0B4J2F2 783 aa23.85■■□□□ 1.41
SMPD1-203ENST00000527275 IPO8O15397 1037 aaKnown RBP23.85■■□□□ 1.41
SMPD1-203ENST00000527275 SIK1P57059 783 aa23.85■■□□□ 1.41
SMPD1-203ENST00000527275 PROSER3Q2NL68 480 aa23.85■■□□□ 1.41
SMPD1-203ENST00000527275 ATF7IPQ6VMQ6 1270 aa23.85■■□□□ 1.41
SMPD1-203ENST00000527275 CLUAP1Q96AJ1 413 aa23.85■■□□□ 1.41
SMPD1-203ENST00000527275 CACNA1FO60840 1977 aa23.85■■□□□ 1.41
SMPD1-203ENST00000527275 PDIA6Q15084 440 aa23.84■■□□□ 1.41
SMPD1-203ENST00000527275 RLBP1P12271 317 aa23.84■■□□□ 1.41
SMPD1-203ENST00000527275 PIP4K2AP48426 406 aaPredicted RBP23.84■■□□□ 1.41
SMPD1-203ENST00000527275 TEX13AQ9BXU3 409 aaPredicted RBP23.84■■□□□ 1.41
SMPD1-203ENST00000527275 PHAXQ9H814 394 aaKnown RBP23.84■■□□□ 1.41
SMPD1-203ENST00000527275 ATP6V1AP38606 617 aa23.83■■□□□ 1.41
SMPD1-203ENST00000527275 ARHGAP45Q92619 1136 aa23.83■■□□□ 1.41
SMPD1-203ENST00000527275 DDX21Q9NR30 783 aaKnown RBP eCLIP23.83■■□□□ 1.41
SMPD1-203ENST00000527275 LAMB4A4D0S4 1761 aa23.82■■□□□ 1.4
SMPD1-203ENST00000527275 MS4A1P11836 297 aa23.82■■□□□ 1.4
SMPD1-203ENST00000527275 FLIIQ13045 1269 aa23.82■■□□□ 1.4
SMPD1-203ENST00000527275 KDM2BQ8NHM5 1336 aa23.82■■□□□ 1.4
SMPD1-203ENST00000527275 A1BGP04217 495 aa23.82■■□□□ 1.4
SMPD1-203ENST00000527275 CENPQQ7L2Z9 268 aaPredicted RBP23.82■■□□□ 1.4
SMPD1-203ENST00000527275 MYL6BP14649 208 aa23.81■■□□□ 1.4
SMPD1-203ENST00000527275 STARD3NLO95772 234 aa23.81■■□□□ 1.4
SMPD1-203ENST00000527275 DZIP1LQ8IYY4 767 aaKnown RBP23.8■■□□□ 1.4
SMPD1-203ENST00000527275 PTPRCP08575 1304 aa23.8■■□□□ 1.4
SMPD1-203ENST00000527275 NBPF26B4DH59 902 aa23.79■■□□□ 1.4
SMPD1-203ENST00000527275 AAMPQ13685 434 aa23.79■■□□□ 1.4
SMPD1-203ENST00000527275 NBPF14Q5TI25 921 aa23.79■■□□□ 1.4
SMPD1-203ENST00000527275 NBPF10Q6P3W6 841 aaKnown RBP23.79■■□□□ 1.4
SMPD1-203ENST00000527275 FTSJ3Q8IY81 847 aaKnown RBP23.79■■□□□ 1.4
SMPD1-203ENST00000527275 NBPF15Q8N660 670 aa23.79■■□□□ 1.4
SMPD1-203ENST00000527275 HYPKQ9NX55 129 aa23.79■■□□□ 1.4
SMPD1-203ENST00000527275 CYP19A1P11511 503 aaPredicted RBP23.79■■□□□ 1.4
SMPD1-203ENST00000527275 KCNQ4P56696 695 aa23.79■■□□□ 1.4
SMPD1-203ENST00000527275 FKBP5Q13451 457 aaPredicted RBP23.79■■□□□ 1.4
SMPD1-203ENST00000527275 ITPK1Q13572 414 aa23.79■■□□□ 1.4
SMPD1-203ENST00000527275 TJP1Q07157 1748 aa23.78■■□□□ 1.4
SMPD1-203ENST00000527275 LRP10Q7Z4F1 713 aa23.78■■□□□ 1.4
SMPD1-203ENST00000527275 API5Q9BZZ5 524 aaKnown RBP23.78■■□□□ 1.4
SMPD1-203ENST00000527275 ERBB4Q15303 1308 aa23.77■■□□□ 1.4
SMPD1-203ENST00000527275 F6X3S4 739 aa23.76■■□□□ 1.39
SMPD1-203ENST00000527275 MVPQ14764 893 aaKnown RBP23.76■■□□□ 1.39
SMPD1-203ENST00000527275 AIMP1Q12904 312 aaKnown RBP23.75■■□□□ 1.39
SMPD1-203ENST00000527275 CCNL1Q9UK58 526 aaPredicted RBP23.75■■□□□ 1.39
SMPD1-203ENST00000527275 ABCC4O15439 1325 aa23.74■■□□□ 1.39
SMPD1-203ENST00000527275 COPS6Q7L5N1 327 aa23.74■■□□□ 1.39
SMPD1-203ENST00000527275 TMEM57Q8N5G2 664 aa23.74■■□□□ 1.39
SMPD1-203ENST00000527275 XAGE3Q8WTP9 111 aa23.73■■□□□ 1.39
SMPD1-203ENST00000527275 ZBTB1Q9Y2K1 713 aa23.73■■□□□ 1.39
SMPD1-203ENST00000527275 LY75O60449 1722 aa23.73■■□□□ 1.39
SMPD1-203ENST00000527275 ZNF831Q5JPB2 1677 aa23.73■■□□□ 1.39
SMPD1-203ENST00000527275 PI4KAP2A4QPH2 592 aa23.72■■□□□ 1.39
SMPD1-203ENST00000527275 PI4KAP1Q8N8J0 262 aa23.72■■□□□ 1.39
SMPD1-203ENST00000527275 CICQ96RK0 1608 aaPredicted RBP23.72■■□□□ 1.39
SMPD1-203ENST00000527275 CRKLP46109 303 aaKnown RBP23.72■■□□□ 1.39
SMPD1-203ENST00000527275 ZNF330Q9Y3S2 320 aaPredicted RBP23.72■■□□□ 1.39
SMPD1-203ENST00000527275 INTS5Q6P9B9 1019 aaKnown RBP23.71■■□□□ 1.39
SMPD1-203ENST00000527275 SLC4A10Q6U841 1118 aa23.71■■□□□ 1.39
SMPD1-203ENST00000527275 LINC00116Q8NCU8 138 aa23.71■■□□□ 1.39
SMPD1-203ENST00000527275 APBA3O96018 575 aa23.71■■□□□ 1.39
SMPD1-203ENST00000527275 IGHDP01880 384 aa23.71■■□□□ 1.39
SMPD1-203ENST00000527275 ITPRIPQ8IWB1 547 aa23.71■■□□□ 1.39
SMPD1-203ENST00000527275 CCDC87Q9NVE4 849 aa23.7■■□□□ 1.38
SMPD1-203ENST00000527275 MYH14Q7Z406 1995 aaKnown RBP23.7■■□□□ 1.38
SMPD1-203ENST00000527275 LRRC4BQ9NT99 713 aa23.69■■□□□ 1.38
SMPD1-203ENST00000527275 ADCY9O60503 1353 aa23.69■■□□□ 1.38
SMPD1-203ENST00000527275 KSR2Q6VAB6 950 aa23.69■■□□□ 1.38
SMPD1-203ENST00000527275 COL5A3P25940 1745 aaPredicted RBP23.69■■□□□ 1.38
SMPD1-203ENST00000527275 DDX58O95786 925 aaKnown RBP23.68■■□□□ 1.38
SMPD1-203ENST00000527275 ANKRD13DQ6ZTN6 518 aa23.68■■□□□ 1.38
SMPD1-203ENST00000527275 SKAP1Q86WV1 359 aa23.68■■□□□ 1.38
SMPD1-203ENST00000527275 DDX19BQ9UMR2 479 aa23.68■■□□□ 1.38
SMPD1-203ENST00000527275 MAP3K2Q9Y2U5 619 aa23.68■■□□□ 1.38
SMPD1-203ENST00000527275 PLSCR1O15162 318 aa23.67■■□□□ 1.38
SMPD1-203ENST00000527275 INTS3Q68E01 1043 aaKnown RBP23.67■■□□□ 1.38
SMPD1-203ENST00000527275 TTLL7Q6ZT98 887 aa23.67■■□□□ 1.38
SMPD1-203ENST00000527275 DNAAF4Q8WXU2 420 aa23.67■■□□□ 1.38
SMPD1-203ENST00000527275 PCDHB15Q9Y5E8 787 aa23.67■■□□□ 1.38
SMPD1-203ENST00000527275 PROM2Q8N271 834 aa23.67■■□□□ 1.38
SMPD1-203ENST00000527275 IL6STP40189 918 aaPredicted RBP23.66■■□□□ 1.38
SMPD1-203ENST00000527275 TXNRD1Q16881 649 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms