RNA–Protein interactions for RNA: ENST00000526884.1

NFRKB-204, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 3

Gene NFRKB, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-204ENST00000526884 KLHL34Q8N239 644 aa31.4■■■□□ 2.62
NFRKB-204ENST00000526884 PNISRQ8TF01 805 aaKnown RBP31.4■■■□□ 2.62
NFRKB-204ENST00000526884 COL15A1P39059 1388 aa31.4■■■□□ 2.62
NFRKB-204ENST00000526884 GYS1P13807 737 aa31.39■■■□□ 2.62
NFRKB-204ENST00000526884 LMOD3Q0VAK6 560 aa31.39■■■□□ 2.62
NFRKB-204ENST00000526884 ZBTB1Q9Y2K1 713 aa31.38■■■□□ 2.61
NFRKB-204ENST00000526884 SCN7AQ01118 1682 aa31.38■■■□□ 2.61
NFRKB-204ENST00000526884 MMP10P09238 476 aa31.35■■■□□ 2.61
NFRKB-204ENST00000526884 RUNDC1Q96C34 613 aa31.35■■■□□ 2.61
NFRKB-204ENST00000526884 KCNQ3O43525 872 aa31.34■■■□□ 2.61
NFRKB-204ENST00000526884 ZPR1O75312 459 aa31.34■■■□□ 2.61
NFRKB-204ENST00000526884 SNRPA1P09661 255 aaKnown RBP31.34■■■□□ 2.61
NFRKB-204ENST00000526884 TMPOP42166 694 aaKnown RBP31.33■■■□□ 2.61
NFRKB-204ENST00000526884 RIPK4P57078 832 aa31.33■■■□□ 2.61
NFRKB-204ENST00000526884 BCORQ6W2J9 1755 aa31.33■■■□□ 2.61
NFRKB-204ENST00000526884 A0A087WZG4 1122 aa31.32■■■□□ 2.6
NFRKB-204ENST00000526884 NARFQ9UHQ1 456 aa31.32■■■□□ 2.6
NFRKB-204ENST00000526884 IL6STP40189 918 aaPredicted RBP31.31■■■□□ 2.6
NFRKB-204ENST00000526884 EIF5P55010 431 aaKnown RBP31.31■■■□□ 2.6
NFRKB-204ENST00000526884 NLGN2Q8NFZ4 835 aa31.31■■■□□ 2.6
NFRKB-204ENST00000526884 ADAMTS8Q9UP79 889 aa31.31■■■□□ 2.6
NFRKB-204ENST00000526884 KIAA1551Q9HCM1 1747 aa31.3■■■□□ 2.6
NFRKB-204ENST00000526884 SRP68Q9UHB9 627 aaKnown RBP31.3■■■□□ 2.6
NFRKB-204ENST00000526884 C10orf71Q711Q0 1435 aa31.3■■■□□ 2.6
NFRKB-204ENST00000526884 AFDNP55196 1824 aaKnown RBP31.29■■■□□ 2.6
NFRKB-204ENST00000526884 CANXP27824 592 aaKnown RBP31.29■■■□□ 2.6
NFRKB-204ENST00000526884 BABAM1Q9NWV8 329 aa31.29■■■□□ 2.6
NFRKB-204ENST00000526884 PARP3Q9Y6F1 533 aa31.29■■■□□ 2.6
NFRKB-204ENST00000526884 NRXN2Q9P2S2 1712 aa31.29■■■□□ 2.6
NFRKB-204ENST00000526884 ANP32CO43423 234 aa31.27■■■□□ 2.6
NFRKB-204ENST00000526884 CCDC146Q8IYE0 955 aa31.27■■■□□ 2.6
NFRKB-204ENST00000526884 FKBP8Q14318 412 aa31.26■■■□□ 2.59
NFRKB-204ENST00000526884 USPL1Q5W0Q7 1092 aa31.26■■■□□ 2.59
NFRKB-204ENST00000526884 NPM2Q86SE8 214 aaKnown RBP31.26■■■□□ 2.59
NFRKB-204ENST00000526884 THUMPD2Q9BTF0 503 aaKnown RBP31.26■■■□□ 2.59
NFRKB-204ENST00000526884 BRCA1P38398 1863 aaKnown RBP31.25■■■□□ 2.59
NFRKB-204ENST00000526884 UTRNP46939 3433 aa31.25■■■□□ 2.59
NFRKB-204ENST00000526884 N4BP2Q86UW6 1770 aaPredicted RBP31.25■■■□□ 2.59
NFRKB-204ENST00000526884 GPR162Q16538 588 aa31.24■■■□□ 2.59
NFRKB-204ENST00000526884 USP16Q9Y5T5 823 aa31.24■■■□□ 2.59
NFRKB-204ENST00000526884 GOLGB1Q14789 3259 aaKnown RBP31.24■■■□□ 2.59
NFRKB-204ENST00000526884 A1BGP04217 495 aa31.22■■■□□ 2.59
NFRKB-204ENST00000526884 MIS18AQ9NYP9 233 aa31.22■■■□□ 2.59
NFRKB-204ENST00000526884 EIF4A1P60842 406 aaKnown RBP31.21■■■□□ 2.59
NFRKB-204ENST00000526884 TM4SF1P30408 202 aa31.2■■■□□ 2.59
NFRKB-204ENST00000526884 TGFB2P61812 414 aa31.2■■■□□ 2.59
NFRKB-204ENST00000526884 TSPYL4Q9UJ04 414 aa31.2■■■□□ 2.59
NFRKB-204ENST00000526884 PXDNLA1KZ92 1463 aa31.2■■■□□ 2.58
NFRKB-204ENST00000526884 PRAMEF22A3QJZ6 481 aa31.19■■■□□ 2.58
NFRKB-204ENST00000526884 GIGYF1O75420 1035 aaPredicted RBP31.19■■■□□ 2.58
NFRKB-204ENST00000526884 RRP7AQ9Y3A4 280 aaKnown RBP31.19■■■□□ 2.58
NFRKB-204ENST00000526884 POLRMTO00411 1230 aaKnown RBP31.18■■■□□ 2.58
NFRKB-204ENST00000526884 DDR1Q08345 913 aa31.18■■■□□ 2.58
NFRKB-204ENST00000526884 NEUROD2Q15784 382 aa31.18■■■□□ 2.58
NFRKB-204ENST00000526884 BCL2L12Q9HB09 334 aa31.18■■■□□ 2.58
NFRKB-204ENST00000526884 ZNF330Q9Y3S2 320 aaPredicted RBP31.18■■■□□ 2.58
NFRKB-204ENST00000526884 GRIN3BO60391 1043 aa31.17■■■□□ 2.58
NFRKB-204ENST00000526884 TRIM35Q9UPQ4 493 aa31.17■■■□□ 2.58
NFRKB-204ENST00000526884 RGL2O15211 777 aa31.16■■■□□ 2.58
NFRKB-204ENST00000526884 DLEC1Q9Y238 1755 aa31.15■■■□□ 2.58
NFRKB-204ENST00000526884 ARFGEF1Q9Y6D6 1849 aa31.15■■■□□ 2.58
NFRKB-204ENST00000526884 NFIXQ14938 502 aa31.15■■■□□ 2.58
NFRKB-204ENST00000526884 PELP1Q8IZL8 1130 aaKnown RBP31.15■■■□□ 2.58
NFRKB-204ENST00000526884 ERBB4Q15303 1308 aa31.14■■■□□ 2.58
NFRKB-204ENST00000526884 YY1P25490 414 aa31.13■■■□□ 2.57
NFRKB-204ENST00000526884 DZIP3Q86Y13 1208 aaKnown RBP31.13■■■□□ 2.57
NFRKB-204ENST00000526884 TBC1D2BQ9UPU7 963 aa31.12■■■□□ 2.57
NFRKB-204ENST00000526884 CAMTA2O94983 1202 aa31.11■■■□□ 2.57
NFRKB-204ENST00000526884 YBX3P16989 372 aaKnown RBP eCLIP31.11■■■□□ 2.57
NFRKB-204ENST00000526884 NUP98P52948 1817 aa31.11■■■□□ 2.57
NFRKB-204ENST00000526884 CARMIL3Q8ND23 1372 aa31.11■■■□□ 2.57
NFRKB-204ENST00000526884 MRS2Q9HD23 443 aa31.11■■■□□ 2.57
NFRKB-204ENST00000526884 NBPF26B4DH59 902 aa31.1■■■□□ 2.57
NFRKB-204ENST00000526884 CHL1O00533 1208 aa31.1■■■□□ 2.57
NFRKB-204ENST00000526884 APAF1O14727 1248 aa31.1■■■□□ 2.57
NFRKB-204ENST00000526884 CALD1Q05682 793 aaKnown RBP31.1■■■□□ 2.57
NFRKB-204ENST00000526884 CCDC184Q52MB2 194 aa31.1■■■□□ 2.57
NFRKB-204ENST00000526884 NBPF10Q6P3W6 841 aaKnown RBP31.1■■■□□ 2.57
NFRKB-204ENST00000526884 CLEC4GQ6UXB4 293 aa31.1■■■□□ 2.57
NFRKB-204ENST00000526884 NBPF15Q8N660 670 aa31.1■■■□□ 2.57
NFRKB-204ENST00000526884 ZNF652Q9Y2D9 606 aa31.1■■■□□ 2.57
NFRKB-204ENST00000526884 ANKRD31Q8N7Z5 1873 aa31.08■■■□□ 2.57
NFRKB-204ENST00000526884 SERPINB2P05120 415 aa31.07■■■□□ 2.56
NFRKB-204ENST00000526884 PIP4K2AP48426 406 aaPredicted RBP31.07■■■□□ 2.56
NFRKB-204ENST00000526884 TBC1D9BQ66K14 1250 aa31.06■■■□□ 2.56
NFRKB-204ENST00000526884 CFAP44Q96MT7 982 aa31.06■■■□□ 2.56
NFRKB-204ENST00000526884 DPEP1P16444 411 aa31.03■■■□□ 2.56
NFRKB-204ENST00000526884 SETDB2Q96T68 719 aa31.03■■■□□ 2.56
NFRKB-204ENST00000526884 A0A0G2JLW4 131 aa31.02■■■□□ 2.56
NFRKB-204ENST00000526884 HOXB7P09629 217 aa31.02■■■□□ 2.56
NFRKB-204ENST00000526884 NCBP3Q53F19 620 aaKnown RBP31.02■■■□□ 2.56
NFRKB-204ENST00000526884 BICDL1Q6ZP65 573 aa31.02■■■□□ 2.56
NFRKB-204ENST00000526884 IFT57Q9NWB7 429 aa31.01■■■□□ 2.55
NFRKB-204ENST00000526884 CCDC27Q2M243 656 aa31■■■□□ 2.55
NFRKB-204ENST00000526884 LAS1LQ9Y4W2 734 aaKnown RBP31■■■□□ 2.55
NFRKB-204ENST00000526884 ERVV-1B6SEH8 477 aa30.99■■■□□ 2.55
NFRKB-204ENST00000526884 GNAI1P63096 354 aa30.99■■■□□ 2.55
NFRKB-204ENST00000526884 PIM2Q9P1W9 311 aa30.99■■■□□ 2.55
NFRKB-204ENST00000526884 PDZRN3Q9UPQ7 1066 aa30.99■■■□□ 2.55
NFRKB-204ENST00000526884 ANKRD36CQ5JPF3 1778 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms