RNA–Protein interactions for RNA: ENST00000526881.1

TRIM29-209, Transcript of tripartite motif containing 29, humanhuman

TSL 3

Gene TRIM29, Length 385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-209ENST00000526881 KCPQ6ZWJ8 1503 aa9.79□□□□□ -0.84
TRIM29-209ENST00000526881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.79□□□□□ -0.84
TRIM29-209ENST00000526881 SLC16A10Q8TF71 515 aa9.79□□□□□ -0.84
TRIM29-209ENST00000526881 LGR6Q9HBX8 967 aa9.78□□□□□ -0.84
TRIM29-209ENST00000526881 WWC3Q9ULE0 1092 aa9.78□□□□□ -0.84
TRIM29-209ENST00000526881 GNPATO15228 680 aa9.77□□□□□ -0.85
TRIM29-209ENST00000526881 ATP6V1AP38606 617 aa9.77□□□□□ -0.85
TRIM29-209ENST00000526881 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
TRIM29-209ENST00000526881 DCAF5Q96JK2 942 aa9.77□□□□□ -0.85
TRIM29-209ENST00000526881 AK7Q96M32 723 aa9.77□□□□□ -0.85
TRIM29-209ENST00000526881 NPC1L1Q9UHC9 1359 aa9.76□□□□□ -0.85
TRIM29-209ENST00000526881 CHD4Q14839 1912 aa9.76□□□□□ -0.85
TRIM29-209ENST00000526881 SIPA1L3O60292 1781 aaPredicted RBP9.76□□□□□ -0.85
TRIM29-209ENST00000526881 UBR2Q8IWV8 1755 aa9.76□□□□□ -0.85
TRIM29-209ENST00000526881 ERVV-2B6SEH9 535 aa9.76□□□□□ -0.85
TRIM29-209ENST00000526881 MTHFSDQ2M296 383 aaKnown RBP9.76□□□□□ -0.85
TRIM29-209ENST00000526881 PLEKHO1Q53GL0 409 aaPredicted RBP9.76□□□□□ -0.85
TRIM29-209ENST00000526881 NFATC2IPQ8NCF5 419 aa9.76□□□□□ -0.85
TRIM29-209ENST00000526881 SLC24A3Q9HC58 644 aa9.76□□□□□ -0.85
TRIM29-209ENST00000526881 KIF13BQ9NQT8 1826 aa9.75□□□□□ -0.85
TRIM29-209ENST00000526881 POLD1P28340 1107 aa9.75□□□□□ -0.85
TRIM29-209ENST00000526881 SLC39A6Q13433 755 aa9.75□□□□□ -0.85
TRIM29-209ENST00000526881 ZNF784Q8NCA9 323 aaPredicted RBP9.75□□□□□ -0.85
TRIM29-209ENST00000526881 PODXL2Q9NZ53 605 aa9.75□□□□□ -0.85
TRIM29-209ENST00000526881 PXDNLA1KZ92 1463 aa9.74□□□□□ -0.85
TRIM29-209ENST00000526881 N4BP2Q86UW6 1770 aaPredicted RBP9.74□□□□□ -0.85
TRIM29-209ENST00000526881 PTCD1O75127 700 aaKnown RBP9.74□□□□□ -0.85
TRIM29-209ENST00000526881 PYGBP11216 843 aa9.74□□□□□ -0.85
TRIM29-209ENST00000526881 SSFA2P28290 1259 aa9.74□□□□□ -0.85
TRIM29-209ENST00000526881 AMOTQ4VCS5 1084 aa9.74□□□□□ -0.85
TRIM29-209ENST00000526881 RASEFQ8IZ41 740 aa9.74□□□□□ -0.85
TRIM29-209ENST00000526881 ARHGEF1Q92888 912 aaKnown RBP9.74□□□□□ -0.85
TRIM29-209ENST00000526881 RNMTO43148 476 aaKnown RBP9.73□□□□□ -0.85
TRIM29-209ENST00000526881 CABP4P57796 275 aa9.73□□□□□ -0.85
TRIM29-209ENST00000526881 INTS5Q6P9B9 1019 aaKnown RBP9.73□□□□□ -0.85
TRIM29-209ENST00000526881 PELP1Q8IZL8 1130 aaKnown RBP9.73□□□□□ -0.85
TRIM29-209ENST00000526881 PHACTR3Q96KR7 559 aa9.73□□□□□ -0.85
TRIM29-209ENST00000526881 SRP68Q9UHB9 627 aaKnown RBP9.73□□□□□ -0.85
TRIM29-209ENST00000526881 CNTNAP4Q9C0A0 1308 aa9.73□□□□□ -0.85
TRIM29-209ENST00000526881 BRCA1P38398 1863 aaKnown RBP9.72□□□□□ -0.85
TRIM29-209ENST00000526881 CEP350Q5VT06 3117 aa9.72□□□□□ -0.85
TRIM29-209ENST00000526881 DIAPH1O60610 1272 aaKnown RBP9.72□□□□□ -0.85
TRIM29-209ENST00000526881 GYS1P13807 737 aa9.72□□□□□ -0.85
TRIM29-209ENST00000526881 MNX1P50219 401 aaPredicted RBP9.72□□□□□ -0.85
TRIM29-209ENST00000526881 AKAP4Q5JQC9 854 aa9.72□□□□□ -0.85
TRIM29-209ENST00000526881 DNAJC10Q8IXB1 793 aa9.72□□□□□ -0.85
TRIM29-209ENST00000526881 SP7Q8TDD2 431 aaPredicted RBP9.72□□□□□ -0.85
TRIM29-209ENST00000526881 SLC52A2Q9HAB3 445 aa9.72□□□□□ -0.85
TRIM29-209ENST00000526881 C10orf71Q711Q0 1435 aa9.72□□□□□ -0.85
TRIM29-209ENST00000526881 HSP90AB1P08238 724 aaKnown RBP9.71□□□□□ -0.86
TRIM29-209ENST00000526881 MMP10P09238 476 aa9.71□□□□□ -0.86
TRIM29-209ENST00000526881 CRKLP46109 303 aaKnown RBP9.71□□□□□ -0.86
TRIM29-209ENST00000526881 DDR1Q08345 913 aa9.71□□□□□ -0.86
TRIM29-209ENST00000526881 GPR162Q16538 588 aa9.71□□□□□ -0.86
TRIM29-209ENST00000526881 C1orf141Q5JVX7 400 aa9.71□□□□□ -0.86
TRIM29-209ENST00000526881 IL17REQ8NFR9 667 aa9.71□□□□□ -0.86
TRIM29-209ENST00000526881 CREBZFQ9NS37 354 aa9.71□□□□□ -0.86
TRIM29-209ENST00000526881 KCNQ3O43525 872 aa9.7□□□□□ -0.86
TRIM29-209ENST00000526881 PPP2R1AP30153 589 aa9.7□□□□□ -0.86
TRIM29-209ENST00000526881 PIP4P2Q8N4L2 257 aa9.7□□□□□ -0.86
TRIM29-209ENST00000526881 FLAD1Q8NFF5 587 aa9.7□□□□□ -0.86
TRIM29-209ENST00000526881 RSPH6AQ9H0K4 717 aa9.7□□□□□ -0.86
TRIM29-209ENST00000526881 ADCY9O60503 1353 aa9.7□□□□□ -0.86
TRIM29-209ENST00000526881 U2SURPO15042 1029 aaKnown RBP9.69□□□□□ -0.86
TRIM29-209ENST00000526881 RPS6KA4O75676 772 aa9.69□□□□□ -0.86
TRIM29-209ENST00000526881 RC3H1Q5TC82 1133 aaKnown RBP9.69□□□□□ -0.86
TRIM29-209ENST00000526881 REM2Q8IYK8 340 aaPredicted RBP9.69□□□□□ -0.86
TRIM29-209ENST00000526881 CEMIPQ8WUJ3 1361 aa9.69□□□□□ -0.86
TRIM29-209ENST00000526881 USP42Q9H9J4 1324 aaKnown RBP9.69□□□□□ -0.86
TRIM29-209ENST00000526881 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
TRIM29-209ENST00000526881 ZBTB1Q9Y2K1 713 aa9.69□□□□□ -0.86
TRIM29-209ENST00000526881 CD2APQ9Y5K6 639 aa9.69□□□□□ -0.86
TRIM29-209ENST00000526881 AFDNP55196 1824 aaKnown RBP9.68□□□□□ -0.86
TRIM29-209ENST00000526881 CARMIL3Q8ND23 1372 aa9.68□□□□□ -0.86
TRIM29-209ENST00000526881 SOS1Q07889 1333 aaPredicted RBP9.68□□□□□ -0.86
TRIM29-209ENST00000526881 TESPA1A2RU30 521 aaPredicted RBP9.68□□□□□ -0.86
TRIM29-209ENST00000526881 PRAMEF22A3QJZ6 481 aa9.68□□□□□ -0.86
TRIM29-209ENST00000526881 CYP19A1P11511 503 aaPredicted RBP9.68□□□□□ -0.86
TRIM29-209ENST00000526881 PRKAR2BP31323 418 aa9.68□□□□□ -0.86
TRIM29-209ENST00000526881 RTCBQ9Y3I0 505 aaKnown RBP9.68□□□□□ -0.86
TRIM29-209ENST00000526881 NRXN2Q9P2S2 1712 aa9.68□□□□□ -0.86
TRIM29-209ENST00000526881 SCN7AQ01118 1682 aa9.67□□□□□ -0.86
TRIM29-209ENST00000526881 ATP10DQ9P241 1426 aa9.67□□□□□ -0.86
TRIM29-209ENST00000526881 SEMA3EO15041 775 aa9.67□□□□□ -0.86
TRIM29-209ENST00000526881 KCNA3P22001 575 aa9.67□□□□□ -0.86
TRIM29-209ENST00000526881 E2F4Q16254 413 aa9.67□□□□□ -0.86
TRIM29-209ENST00000526881 TRAPPC3LQ5T215 181 aa9.67□□□□□ -0.86
TRIM29-209ENST00000526881 SPDYE1Q8NFV5 336 aaPredicted RBP9.67□□□□□ -0.86
TRIM29-209ENST00000526881 ZNF496Q96IT1 587 aaPredicted RBP9.67□□□□□ -0.86
TRIM29-209ENST00000526881 A0A0G2JLW4 131 aa9.66□□□□□ -0.86
TRIM29-209ENST00000526881 DCTN1Q14203 1278 aa9.66□□□□□ -0.86
TRIM29-209ENST00000526881 USPL1Q5W0Q7 1092 aa9.66□□□□□ -0.86
TRIM29-209ENST00000526881 DLG5Q8TDM6 1919 aa9.66□□□□□ -0.86
TRIM29-209ENST00000526881 COL11A2P13942 1736 aaPredicted RBP9.65□□□□□ -0.86
TRIM29-209ENST00000526881 COL15A1P39059 1388 aa9.65□□□□□ -0.86
TRIM29-209ENST00000526881 POLRMTO00411 1230 aaKnown RBP9.65□□□□□ -0.86
TRIM29-209ENST00000526881 ZMYND10O75800 440 aa9.65□□□□□ -0.86
TRIM29-209ENST00000526881 PRR29P0C7W0 189 aa9.65□□□□□ -0.86
TRIM29-209ENST00000526881 DPEP1P16444 411 aa9.65□□□□□ -0.86
TRIM29-209ENST00000526881 PIP4K2AP48426 406 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms