RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 NHSQ6T4R5 1651 aa9.46□□□□□ -0.89
CSTF3-207ENST00000526480 PLEKHG3A1L390 1219 aa9.46□□□□□ -0.9
CSTF3-207ENST00000526480 ZBED2Q9BTP6 218 aa9.46□□□□□ -0.9
CSTF3-207ENST00000526480 PRDM11Q9NQV5 511 aa9.46□□□□□ -0.9
CSTF3-207ENST00000526480 VPS9D1Q9Y2B5 631 aa9.46□□□□□ -0.9
CSTF3-207ENST00000526480 KIAA0232Q92628 1395 aa9.46□□□□□ -0.9
CSTF3-207ENST00000526480 GRIN3BO60391 1043 aa9.45□□□□□ -0.9
CSTF3-207ENST00000526480 HSPA1AP0DMV8 641 aaKnown RBP9.45□□□□□ -0.9
CSTF3-207ENST00000526480 HSPA1BP0DMV9 641 aaKnown RBP9.45□□□□□ -0.9
CSTF3-207ENST00000526480 MS4A1P11836 297 aa9.45□□□□□ -0.9
CSTF3-207ENST00000526480 PSME1Q06323 249 aa9.45□□□□□ -0.9
CSTF3-207ENST00000526480 TXNRD1Q16881 649 aa9.45□□□□□ -0.9
CSTF3-207ENST00000526480 FAM198AQ9UFP1 575 aa9.45□□□□□ -0.9
CSTF3-207ENST00000526480 KAT6BQ8WYB5 2073 aa9.44□□□□□ -0.9
CSTF3-207ENST00000526480 SLC4A5Q9BY07 1137 aa9.44□□□□□ -0.9
CSTF3-207ENST00000526480 TIMELESSQ9UNS1 1208 aa9.44□□□□□ -0.9
CSTF3-207ENST00000526480 DHX57Q6P158 1386 aaKnown RBP9.43□□□□□ -0.9
CSTF3-207ENST00000526480 ZNF827Q17R98 1081 aa9.43□□□□□ -0.9
CSTF3-207ENST00000526480 PROX2Q3B8N5 592 aa9.43□□□□□ -0.9
CSTF3-207ENST00000526480 KANK4Q5T7N3 995 aaPredicted RBP9.43□□□□□ -0.9
CSTF3-207ENST00000526480 RBM46Q8TBY0 533 aaKnown RBP9.43□□□□□ -0.9
CSTF3-207ENST00000526480 NLRP7Q8WX94 980 aa9.43□□□□□ -0.9
CSTF3-207ENST00000526480 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
CSTF3-207ENST00000526480 LARP1Q6PKG0 1096 aaKnown RBP9.42□□□□□ -0.9
CSTF3-207ENST00000526480 CICQ96RK0 1608 aaPredicted RBP9.42□□□□□ -0.9
CSTF3-207ENST00000526480 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
CSTF3-207ENST00000526480 TOMM70O94826 608 aa9.41□□□□□ -0.9
CSTF3-207ENST00000526480 RGPD5Q99666 1765 aa9.4□□□□□ -0.9
CSTF3-207ENST00000526480 PKD1L3Q7Z443 1732 aa9.4□□□□□ -0.9
CSTF3-207ENST00000526480 PIK3C2AO00443 1686 aa9.4□□□□□ -0.9
CSTF3-207ENST00000526480 NBPF26B4DH59 902 aa9.4□□□□□ -0.9
CSTF3-207ENST00000526480 ERICH6Q7L0X2 663 aa9.4□□□□□ -0.9
CSTF3-207ENST00000526480 PACS2Q86VP3 889 aa9.4□□□□□ -0.9
CSTF3-207ENST00000526480 TCP11L2Q8N4U5 519 aa9.4□□□□□ -0.9
CSTF3-207ENST00000526480 PMFBP1Q8TBY8 1022 aa9.4□□□□□ -0.9
CSTF3-207ENST00000526480 EYA1Q99502 592 aa9.4□□□□□ -0.9
CSTF3-207ENST00000526480 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.9
CSTF3-207ENST00000526480 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.9
CSTF3-207ENST00000526480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.39□□□□□ -0.91
CSTF3-207ENST00000526480 SSTR3P32745 418 aaPredicted RBP9.39□□□□□ -0.91
CSTF3-207ENST00000526480 STK26Q9P289 416 aa9.39□□□□□ -0.91
CSTF3-207ENST00000526480 RABGEF1Q9UJ41 708 aa9.39□□□□□ -0.91
CSTF3-207ENST00000526480 GOLGA8CPA6NN73 597 aa9.38□□□□□ -0.91
CSTF3-207ENST00000526480 C3orf80F5H4A9 247 aa9.38□□□□□ -0.91
CSTF3-207ENST00000526480 HRO43593 1189 aa9.38□□□□□ -0.91
CSTF3-207ENST00000526480 NUDT18Q6ZVK8 323 aa9.38□□□□□ -0.91
CSTF3-207ENST00000526480 NBPF3Q9H094 633 aa9.38□□□□□ -0.91
CSTF3-207ENST00000526480 NMRK2Q9NPI5 230 aa9.38□□□□□ -0.91
CSTF3-207ENST00000526480 QRICH2Q9H0J4 1663 aa9.38□□□□□ -0.91
CSTF3-207ENST00000526480 COL5A2P05997 1499 aaPredicted RBP9.37□□□□□ -0.91
CSTF3-207ENST00000526480 RCCD1A6NED2 376 aa9.37□□□□□ -0.91
CSTF3-207ENST00000526480 ZC3H6P61129 1189 aaKnown RBP9.37□□□□□ -0.91
CSTF3-207ENST00000526480 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
CSTF3-207ENST00000526480 MARCH10Q8NA82 808 aaPredicted RBP9.37□□□□□ -0.91
CSTF3-207ENST00000526480 GOPCQ9HD26 462 aa9.37□□□□□ -0.91
CSTF3-207ENST00000526480 PNMA3Q9UL41 463 aa9.37□□□□□ -0.91
CSTF3-207ENST00000526480 POLD1P28340 1107 aa9.36□□□□□ -0.91
CSTF3-207ENST00000526480 TATDN2Q93075 761 aa9.36□□□□□ -0.91
CSTF3-207ENST00000526480 HCSTQ9UBK5 93 aa9.36□□□□□ -0.91
CSTF3-207ENST00000526480 BCL9O00512 1426 aa9.36□□□□□ -0.91
CSTF3-207ENST00000526480 KIAA1551Q9HCM1 1747 aa9.36□□□□□ -0.91
CSTF3-207ENST00000526480 PNPLA7Q6ZV29 1317 aa9.35□□□□□ -0.91
CSTF3-207ENST00000526480 C11orf95C9JLR9 678 aaPredicted RBP9.35□□□□□ -0.91
CSTF3-207ENST00000526480 BHMG1C9JSJ3 638 aaPredicted RBP9.35□□□□□ -0.91
CSTF3-207ENST00000526480 DNAJB2P25686 324 aa9.35□□□□□ -0.91
CSTF3-207ENST00000526480 BEGAINQ9BUH8 593 aa9.35□□□□□ -0.91
CSTF3-207ENST00000526480 IRX2Q9BZI1 471 aaPredicted RBP9.35□□□□□ -0.91
CSTF3-207ENST00000526480 TNRC6CQ9HCJ0 1690 aaKnown RBP9.35□□□□□ -0.91
CSTF3-207ENST00000526480 COL18A1P39060 1754 aa9.35□□□□□ -0.91
CSTF3-207ENST00000526480 TRPM1Q7Z4N2 1603 aa9.34□□□□□ -0.91
CSTF3-207ENST00000526480 ACIN1Q9UKV3 1341 aaKnown RBP9.34□□□□□ -0.91
CSTF3-207ENST00000526480 ITSN1Q15811 1721 aa9.34□□□□□ -0.91
CSTF3-207ENST00000526480 EVA1CP58658 441 aa9.34□□□□□ -0.91
CSTF3-207ENST00000526480 LY75O60449 1722 aa9.34□□□□□ -0.92
CSTF3-207ENST00000526480 N4BP2Q86UW6 1770 aaPredicted RBP9.33□□□□□ -0.92
CSTF3-207ENST00000526480 SH3D19Q5HYK7 790 aa9.33□□□□□ -0.92
CSTF3-207ENST00000526480 LRRC4BQ9NT99 713 aa9.33□□□□□ -0.92
CSTF3-207ENST00000526480 THRAP3Q9Y2W1 955 aaKnown RBP9.33□□□□□ -0.92
CSTF3-207ENST00000526480 NUP155O75694 1391 aa9.33□□□□□ -0.92
CSTF3-207ENST00000526480 ABCC11Q96J66 1382 aa9.33□□□□□ -0.92
CSTF3-207ENST00000526480 CRB1P82279 1406 aa9.32□□□□□ -0.92
CSTF3-207ENST00000526480 ANKARQ7Z5J8 1434 aa9.32□□□□□ -0.92
CSTF3-207ENST00000526480 MLLT1Q03111 559 aaPredicted RBP9.32□□□□□ -0.92
CSTF3-207ENST00000526480 DDB1Q16531 1140 aa9.32□□□□□ -0.92
CSTF3-207ENST00000526480 SLC16A10Q8TF71 515 aa9.32□□□□□ -0.92
CSTF3-207ENST00000526480 TMEM134Q9H6X4 195 aa9.32□□□□□ -0.92
CSTF3-207ENST00000526480 SEPT9Q9UHD8 586 aaPredicted RBP9.32□□□□□ -0.92
CSTF3-207ENST00000526480 VIRMAQ69YN4 1812 aaKnown RBP9.32□□□□□ -0.92
CSTF3-207ENST00000526480 BRCA1P38398 1863 aaKnown RBP9.32□□□□□ -0.92
CSTF3-207ENST00000526480 YTHDC2Q9H6S0 1430 aaKnown RBP9.31□□□□□ -0.92
CSTF3-207ENST00000526480 SMAPO00193 183 aa9.31□□□□□ -0.92
CSTF3-207ENST00000526480 TMEM132EQ6IEE7 984 aa9.31□□□□□ -0.92
CSTF3-207ENST00000526480 LAPTM4BQ86VI4 370 aa9.31□□□□□ -0.92
CSTF3-207ENST00000526480 USP54Q70EL1 1684 aa9.31□□□□□ -0.92
CSTF3-207ENST00000526480 SBF1O95248 1867 aa9.31□□□□□ -0.92
CSTF3-207ENST00000526480 PRR36Q9H6K5 1346 aa9.31□□□□□ -0.92
CSTF3-207ENST00000526480 GPRASP1Q5JY77 1395 aa9.3□□□□□ -0.92
CSTF3-207ENST00000526480 FOXN1O15353 648 aa9.3□□□□□ -0.92
CSTF3-207ENST00000526480 NUTM2GQ5VZR2 741 aa9.3□□□□□ -0.92
CSTF3-207ENST00000526480 KCTD12Q96CX2 325 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms