RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 CCDC83Q8IWF9 413 aa16.5■□□□□ 0.23
PCDHB18P-202ENST00000526308 LIMCH1Q9UPQ0 1083 aa16.5■□□□□ 0.23
PCDHB18P-202ENST00000526308 PRR36Q9H6K5 1346 aa16.5■□□□□ 0.23
PCDHB18P-202ENST00000526308 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
PCDHB18P-202ENST00000526308 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
PCDHB18P-202ENST00000526308 KIF3AQ9Y496 699 aa16.5■□□□□ 0.23
PCDHB18P-202ENST00000526308 CRB1P82279 1406 aa16.5■□□□□ 0.23
PCDHB18P-202ENST00000526308 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
PCDHB18P-202ENST00000526308 SNX14Q9Y5W7 946 aa16.49■□□□□ 0.23
PCDHB18P-202ENST00000526308 SSH2Q76I76 1423 aa16.49■□□□□ 0.23
PCDHB18P-202ENST00000526308 SRGAP3O43295 1099 aa16.49■□□□□ 0.23
PCDHB18P-202ENST00000526308 KDM4AO75164 1064 aa16.49■□□□□ 0.23
PCDHB18P-202ENST00000526308 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
PCDHB18P-202ENST00000526308 CNTROBQ8N137 903 aa16.49■□□□□ 0.23
PCDHB18P-202ENST00000526308 F13A1P00488 732 aa16.48■□□□□ 0.23
PCDHB18P-202ENST00000526308 DNM1Q05193 864 aaKnown RBP16.48■□□□□ 0.23
PCDHB18P-202ENST00000526308 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
PCDHB18P-202ENST00000526308 CBX1P83916 185 aa16.48■□□□□ 0.23
PCDHB18P-202ENST00000526308 DIAPH3Q9NSV4 1193 aa16.48■□□□□ 0.23
PCDHB18P-202ENST00000526308 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
PCDHB18P-202ENST00000526308 KCNJ4P48050 445 aa16.48■□□□□ 0.23
PCDHB18P-202ENST00000526308 RASEFQ8IZ41 740 aa16.48■□□□□ 0.23
PCDHB18P-202ENST00000526308 LTV1Q96GA3 475 aaPredicted RBP16.48■□□□□ 0.23
PCDHB18P-202ENST00000526308 ZHX1Q9UKY1 873 aaPredicted RBP16.48■□□□□ 0.23
PCDHB18P-202ENST00000526308 RPAP1Q9BWH6 1393 aaPredicted RBP16.47■□□□□ 0.23
PCDHB18P-202ENST00000526308 USP44Q9H0E7 712 aa16.47■□□□□ 0.23
PCDHB18P-202ENST00000526308 RAD50Q92878 1312 aa16.47■□□□□ 0.23
PCDHB18P-202ENST00000526308 SGSM2O43147 1006 aa16.47■□□□□ 0.23
PCDHB18P-202ENST00000526308 GJB2P29033 226 aa16.47■□□□□ 0.23
PCDHB18P-202ENST00000526308 RUFY3Q7L099 469 aa16.47■□□□□ 0.23
PCDHB18P-202ENST00000526308 SMAP1Q8IYB5 467 aaPredicted RBP16.47■□□□□ 0.23
PCDHB18P-202ENST00000526308 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
PCDHB18P-202ENST00000526308 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
PCDHB18P-202ENST00000526308 HDGFL1Q5TGJ6 251 aa16.46■□□□□ 0.23
PCDHB18P-202ENST00000526308 JAKMIP1Q96N16 626 aaKnown RBP16.46■□□□□ 0.23
PCDHB18P-202ENST00000526308 DLC1Q96QB1 1528 aa16.46■□□□□ 0.23
PCDHB18P-202ENST00000526308 DRC7Q8IY82 874 aa16.46■□□□□ 0.22
PCDHB18P-202ENST00000526308 GOLGA6L6A8MZA4 724 aa16.45■□□□□ 0.22
PCDHB18P-202ENST00000526308 PPP4R3BQ5MIZ7 849 aa16.45■□□□□ 0.22
PCDHB18P-202ENST00000526308 A2ML1A8K2U0 1454 aa16.45■□□□□ 0.22
PCDHB18P-202ENST00000526308 TMEM87AQ8NBN3 555 aa16.45■□□□□ 0.22
PCDHB18P-202ENST00000526308 PHAXQ9H814 394 aaKnown RBP16.45■□□□□ 0.22
PCDHB18P-202ENST00000526308 CAMK4Q16566 473 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 PRPF40BQ6NWY9 871 aaKnown RBP16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 FERMT3Q86UX7 667 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 EYA1Q99502 592 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 PDRG1Q9NUG6 133 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 PRDM4Q9UKN5 801 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 GOLGA6L4A6NEF3 574 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 CCDC192P0DO97 292 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 KIF1BPQ96EK5 621 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 TCHHQ07283 1943 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 GNAT3A8MTJ3 354 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 RAB11FIP3O75154 756 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 LARGE1O95461 756 aa16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 CEBPAP49715 358 aaPredicted RBP16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 HDGFP51858 240 aaKnown RBP16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 NGDNQ8NEJ9 315 aaKnown RBP16.44■□□□□ 0.22
PCDHB18P-202ENST00000526308 NUTM2GQ5VZR2 741 aa16.43■□□□□ 0.22
PCDHB18P-202ENST00000526308 NECAB1Q8N987 351 aa16.43■□□□□ 0.22
PCDHB18P-202ENST00000526308 LSG1Q9H089 658 aaKnown RBP16.43■□□□□ 0.22
PCDHB18P-202ENST00000526308 AOX1Q06278 1338 aa16.43■□□□□ 0.22
PCDHB18P-202ENST00000526308 ZNF710Q8N1W2 664 aa16.42■□□□□ 0.22
PCDHB18P-202ENST00000526308 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
PCDHB18P-202ENST00000526308 PYCARDQ9ULZ3 195 aa16.42■□□□□ 0.22
PCDHB18P-202ENST00000526308 RUFY2Q8WXA3 655 aa16.42■□□□□ 0.22
PCDHB18P-202ENST00000526308 TTC14Q96N46 770 aa16.42■□□□□ 0.22
PCDHB18P-202ENST00000526308 CYP46A1Q9Y6A2 500 aa16.42■□□□□ 0.22
PCDHB18P-202ENST00000526308 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
PCDHB18P-202ENST00000526308 PI4K2BQ8TCG2 481 aa16.42■□□□□ 0.22
PCDHB18P-202ENST00000526308 BCL2L12Q9HB09 334 aa16.42■□□□□ 0.22
PCDHB18P-202ENST00000526308 LARP1BQ659C4 914 aaKnown RBP16.41■□□□□ 0.22
PCDHB18P-202ENST00000526308 PDCL2Q8N4E4 241 aa16.41■□□□□ 0.22
PCDHB18P-202ENST00000526308 NBPF7P0C2Y1 421 aaPredicted RBP16.4■□□□□ 0.22
PCDHB18P-202ENST00000526308 ZKSCAN1P17029 563 aaPredicted RBP16.4■□□□□ 0.22
PCDHB18P-202ENST00000526308 CKAP2LQ8IYA6 745 aa16.4■□□□□ 0.22
PCDHB18P-202ENST00000526308 ADCK5Q3MIX3 580 aa16.4■□□□□ 0.22
PCDHB18P-202ENST00000526308 MTMR6Q9Y217 621 aa16.4■□□□□ 0.22
PCDHB18P-202ENST00000526308 ARHGEF10O15013 1369 aa16.4■□□□□ 0.22
PCDHB18P-202ENST00000526308 RIOK3O14730 519 aaKnown RBP16.4■□□□□ 0.22
PCDHB18P-202ENST00000526308 FAM173BQ6P4H8 233 aa16.4■□□□□ 0.22
PCDHB18P-202ENST00000526308 C14orf37Q86TY3 774 aa16.4■□□□□ 0.22
PCDHB18P-202ENST00000526308 HYPKQ9NX55 129 aa16.4■□□□□ 0.22
PCDHB18P-202ENST00000526308 AP5Z1O43299 807 aa16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 TAF7Q15545 349 aaPredicted RBP16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 CLASRPQ8N2M8 674 aaKnown RBP16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 BCL11BQ9C0K0 894 aaPredicted RBP16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 SPTLC3Q9NUV7 552 aa16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 EPB41L2O43491 1005 aaKnown RBP16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 TPM3P06753 285 aa16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 KRT85P78386 507 aa16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 PTH1RQ03431 593 aa16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 KIAA1524Q8TCG1 905 aa16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 NUP62CLQ9H1M0 184 aa16.39■□□□□ 0.21
PCDHB18P-202ENST00000526308 GLRX3O76003 335 aaKnown RBP16.38■□□□□ 0.21
PCDHB18P-202ENST00000526308 IFIT2P09913 472 aaKnown RBP16.38■□□□□ 0.21
PCDHB18P-202ENST00000526308 PTGS1P23219 599 aa16.38■□□□□ 0.21
PCDHB18P-202ENST00000526308 MAP3K11Q16584 847 aa16.38■□□□□ 0.21
PCDHB18P-202ENST00000526308 RBM33Q96EV2 1170 aaKnown RBP16.38■□□□□ 0.21
PCDHB18P-202ENST00000526308 FLT4P35916 1363 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms