RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CRTC2Q53ET0 693 aaPredicted RBP7.84□□□□□ -1.15
USP48-211ENST00000526044 CDCA8Q53HL2 280 aa7.84□□□□□ -1.15
USP48-211ENST00000526044 WDR44Q5JSH3 913 aa7.84□□□□□ -1.15
USP48-211ENST00000526044 FOXR1Q6PIV2 292 aa7.84□□□□□ -1.15
USP48-211ENST00000526044 BEND7Q8N7W2 519 aaPredicted RBP7.84□□□□□ -1.15
USP48-211ENST00000526044 A6NJY4 79 aa7.83□□□□□ -1.16
USP48-211ENST00000526044 RHOQP17081 205 aa7.83□□□□□ -1.16
USP48-211ENST00000526044 MTFR1Q15390 333 aa7.83□□□□□ -1.16
USP48-211ENST00000526044 GNASQ5JWF2 1037 aa7.83□□□□□ -1.16
USP48-211ENST00000526044 NBPF10Q6P3W6 841 aaKnown RBP7.83□□□□□ -1.16
USP48-211ENST00000526044 TAS1R3Q7RTX0 852 aa7.83□□□□□ -1.16
USP48-211ENST00000526044 PPARGC1BQ86YN6 1023 aaKnown RBP7.83□□□□□ -1.16
USP48-211ENST00000526044 NBPF15Q8N660 670 aa7.83□□□□□ -1.16
USP48-211ENST00000526044 USP17L15C9J2P7 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L10C9JJH3 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L13C9JLJ4 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L12C9JPN9 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L11C9JVI0 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L21D6R901 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L18D6R9N7 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L22D6RA61 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L17D6RBQ6 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L19D6RCP7 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L20D6RJB6 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 M0R2N6 131 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 CDK2AP1O14519 115 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 DKK1O94907 266 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 SEC13P55735 322 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 SRPK2P78362 688 aaKnown RBP7.82□□□□□ -1.16
USP48-211ENST00000526044 USP17L24Q0WX57 530 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 GALNT6Q8NCL4 622 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 NEDD1Q8NHV4 660 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 GMCL1Q96IK5 515 aa7.82□□□□□ -1.16
USP48-211ENST00000526044 BAZ1AQ9NRL2 1556 aaPredicted RBP7.82□□□□□ -1.16
USP48-211ENST00000526044 EIF4G1Q04637 1599 aaKnown RBP7.81□□□□□ -1.16
USP48-211ENST00000526044 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.81□□□□□ -1.16
USP48-211ENST00000526044 SENP3-EIF4A1A0A087X0R7 540 aa7.81□□□□□ -1.16
USP48-211ENST00000526044 SFI1A8K8P3 1242 aa7.81□□□□□ -1.16
USP48-211ENST00000526044 ADAM23O75077 832 aa7.81□□□□□ -1.16
USP48-211ENST00000526044 DPYDQ12882 1025 aa7.81□□□□□ -1.16
USP48-211ENST00000526044 PLA2G4EQ3MJ16 856 aa7.81□□□□□ -1.16
USP48-211ENST00000526044 ANKMY2Q8IV38 441 aa7.81□□□□□ -1.16
USP48-211ENST00000526044 RHBDD1Q8TEB9 315 aa7.81□□□□□ -1.16
USP48-211ENST00000526044 PBXIP1Q96AQ6 731 aa7.81□□□□□ -1.16
USP48-211ENST00000526044 XP32Q5T750 250 aa7.8□□□□□ -1.16
USP48-211ENST00000526044 TNS4Q8IZW8 715 aa7.8□□□□□ -1.16
USP48-211ENST00000526044 NIFKQ9BYG3 293 aaKnown RBP7.8□□□□□ -1.16
USP48-211ENST00000526044 TIMMDC1Q9NPL8 285 aa7.8□□□□□ -1.16
USP48-211ENST00000526044 MBIPQ9NS73 344 aa7.8□□□□□ -1.16
USP48-211ENST00000526044 SCHIP1Q9P0W5 487 aaPredicted RBP7.8□□□□□ -1.16
USP48-211ENST00000526044 SMARCA4P51532 1647 aa7.79□□□□□ -1.16
USP48-211ENST00000526044 PHKA2P46019 1235 aa7.79□□□□□ -1.16
USP48-211ENST00000526044 C4orf17Q53FE4 359 aa7.79□□□□□ -1.16
USP48-211ENST00000526044 FAM200AQ8TCP9 573 aa7.79□□□□□ -1.16
USP48-211ENST00000526044 DCAF5Q96JK2 942 aa7.79□□□□□ -1.16
USP48-211ENST00000526044 SPOCK3Q9BQ16 436 aa7.79□□□□□ -1.16
USP48-211ENST00000526044 IQSEC3Q9UPP2 1182 aaPredicted RBP7.79□□□□□ -1.16
USP48-211ENST00000526044 DYRK1BQ9Y463 629 aa7.79□□□□□ -1.16
USP48-211ENST00000526044 MROH2BQ7Z745 1585 aa7.79□□□□□ -1.16
USP48-211ENST00000526044 CNTNAP5Q8WYK1 1306 aa7.78□□□□□ -1.16
USP48-211ENST00000526044 ATG7O95352 703 aa7.78□□□□□ -1.16
USP48-211ENST00000526044 EPHA4P54764 986 aa7.78□□□□□ -1.16
USP48-211ENST00000526044 ELOAQ14241 798 aaKnown RBP7.78□□□□□ -1.16
USP48-211ENST00000526044 TSEN2Q8NCE0 465 aaKnown RBP7.78□□□□□ -1.16
USP48-211ENST00000526044 ARXQ96QS3 562 aa7.78□□□□□ -1.16
USP48-211ENST00000526044 NOVA2Q9UNW9 492 aaKnown RBP7.78□□□□□ -1.16
USP48-211ENST00000526044 PPP1R15AO75807 674 aaPredicted RBP7.77□□□□□ -1.17
USP48-211ENST00000526044 BCRP11274 1271 aa7.77□□□□□ -1.17
USP48-211ENST00000526044 GAS6Q14393 721 aa7.77□□□□□ -1.17
USP48-211ENST00000526044 HINFPQ9BQA5 517 aa7.77□□□□□ -1.17
USP48-211ENST00000526044 NSFL1CQ9UNZ2 370 aaKnown RBP7.77□□□□□ -1.17
USP48-211ENST00000526044 RSF1Q96T23 1441 aaPredicted RBP7.77□□□□□ -1.17
USP48-211ENST00000526044 IGF1RP08069 1367 aa7.76□□□□□ -1.17
USP48-211ENST00000526044 A0A1B0GTH6 734 aa7.76□□□□□ -1.17
USP48-211ENST00000526044 SLC9A9Q8IVB4 645 aa7.76□□□□□ -1.17
USP48-211ENST00000526044 GAS2L1Q99501 681 aaPredicted RBP7.76□□□□□ -1.17
USP48-211ENST00000526044 CABP1Q9NZU7 370 aa7.76□□□□□ -1.17
USP48-211ENST00000526044 USP3Q9Y6I4 520 aa7.76□□□□□ -1.17
USP48-211ENST00000526044 CC2D2AQ9P2K1 1620 aa7.76□□□□□ -1.17
USP48-211ENST00000526044 H7C1W4 665 aa7.75□□□□□ -1.17
USP48-211ENST00000526044 F11P03951 625 aa7.75□□□□□ -1.17
USP48-211ENST00000526044 PLA2G4AP47712 749 aa7.75□□□□□ -1.17
USP48-211ENST00000526044 RIPOR1Q6ZS17 1223 aa7.75□□□□□ -1.17
USP48-211ENST00000526044 TRIM22Q8IYM9 498 aa7.75□□□□□ -1.17
USP48-211ENST00000526044 ZNF295-AS1Q8N0V1 137 aa7.75□□□□□ -1.17
USP48-211ENST00000526044 TRERF1Q96PN7 1200 aa7.75□□□□□ -1.17
USP48-211ENST00000526044 ARID3AQ99856 593 aa7.75□□□□□ -1.17
USP48-211ENST00000526044 ACIN1Q9UKV3 1341 aaKnown RBP7.75□□□□□ -1.17
USP48-211ENST00000526044 TEAD4Q15561 434 aa7.74□□□□□ -1.17
USP48-211ENST00000526044 TBCELQ5QJ74 424 aa7.74□□□□□ -1.17
USP48-211ENST00000526044 GAS2L2Q8NHY3 880 aa7.74□□□□□ -1.17
USP48-211ENST00000526044 AIDAQ96BJ3 306 aa7.74□□□□□ -1.17
USP48-211ENST00000526044 TSPAN10Q9H1Z9 355 aaPredicted RBP7.74□□□□□ -1.17
USP48-211ENST00000526044 CUEDC1Q9NWM3 386 aaPredicted RBP7.74□□□□□ -1.17
USP48-211ENST00000526044 CHMP3Q9Y3E7 222 aa7.74□□□□□ -1.17
USP48-211ENST00000526044 ATAD2Q6PL18 1390 aa7.73□□□□□ -1.17
USP48-211ENST00000526044 K7ELQ4 463 aaPredicted RBP7.73□□□□□ -1.17
USP48-211ENST00000526044 MSX1P28360 303 aa7.73□□□□□ -1.17
USP48-211ENST00000526044 NOS2P35228 1153 aa7.73□□□□□ -1.17
USP48-211ENST00000526044 PSMA6P60900 246 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms