RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 KRT85P78386 507 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 SLC4A10Q6U841 1118 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 TMCO3Q6UWJ1 677 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 C10orf67Q8IYJ2 551 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 BICD2Q8TD16 824 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 FUCA2Q9BTY2 467 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 CBX8Q9HC52 389 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 MBIPQ9NS73 344 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 TRPM2O94759 1503 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 BECN2A8MW95 431 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 KIF2AO00139 706 aaPredicted RBP5.57□□□□□ -1.52
HIPK3-204ENST00000525975 NEMFO60524 1076 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 GTF2A1P52655 376 aaPredicted RBP5.57□□□□□ -1.52
HIPK3-204ENST00000525975 LMOD3Q0VAK6 560 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 NFE2L2Q16236 605 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 GORABQ5T7V8 394 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 CACTINQ8WUQ7 758 aaKnown RBP5.57□□□□□ -1.52
HIPK3-204ENST00000525975 TMX1Q9H3N1 280 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 EFCC1Q9HA90 598 aa5.57□□□□□ -1.52
HIPK3-204ENST00000525975 RPAP1Q9BWH6 1393 aaPredicted RBP5.57□□□□□ -1.52
HIPK3-204ENST00000525975 TRHP20396 242 aaPredicted RBP5.56□□□□□ -1.52
HIPK3-204ENST00000525975 RBM6P78332 1123 aaKnown RBP5.56□□□□□ -1.52
HIPK3-204ENST00000525975 SLFNL1Q499Z3 407 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 KRBA2Q6ZNG9 492 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 CCDC83Q8IWF9 413 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 LIMCH1Q9UPQ0 1083 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 EXOC6BQ9Y2D4 811 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 LRRFIP2Q9Y608 721 aaKnown RBP5.56□□□□□ -1.52
HIPK3-204ENST00000525975 MRVI1Q9Y6F6 885 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 RTL1A6NKG5 1358 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 RAD50Q92878 1312 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 KIF3BO15066 747 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 FERMT3Q86UX7 667 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 C8orf58Q8NAV2 365 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 CCDC191Q8NCU4 936 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 MNS1Q8NEH6 495 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 MEIS3Q99687 375 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 TERF2IPQ9NYB0 399 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 MYOM2P54296 1465 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 YEATS2Q9ULM3 1422 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 CHMLP26374 656 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 GJB2P29033 226 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 ERCC6LQ2NKX8 1250 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 ARHGAP29Q52LW3 1261 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 NOM1Q5C9Z4 860 aaKnown RBP5.56□□□□□ -1.52
HIPK3-204ENST00000525975 EFCAB2Q5VUJ9 269 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 HOMER1Q86YM7 354 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 HS6ST3Q8IZP7 471 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 UBXN4Q92575 508 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 AK7Q96M32 723 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 DNAJC25Q9H1X3 360 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 DACT1Q9NYF0 836 aa5.56□□□□□ -1.52
HIPK3-204ENST00000525975 SNW1Q13573 536 aaKnown RBP5.55□□□□□ -1.52
HIPK3-204ENST00000525975 CTR9Q6PD62 1173 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 TEX2Q8IWB9 1127 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 LRRCC1Q9C099 1032 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 KIF24Q5T7B8 1368 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 CCDC69A6NI79 296 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 USP27XA6NNY8 438 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 APPP05067 770 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 AK2P54819 239 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 SYT10Q6XYQ8 523 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 RGS22Q8NE09 1264 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 KIF1BPQ96EK5 621 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 DDX19AQ9NUU7 478 aaKnown RBP5.55□□□□□ -1.52
HIPK3-204ENST00000525975 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.55□□□□□ -1.52
HIPK3-204ENST00000525975 FAM135BQ49AJ0 1406 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 MSH6P52701 1360 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 DTNBO60941 627 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 PNMA6AP0CW24 399 aaPredicted RBP5.55□□□□□ -1.52
HIPK3-204ENST00000525975 LIG1P18858 919 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 CLCN6P51797 869 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 KRT24Q2M2I5 525 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 HDGFL2Q7Z4V5 671 aaPredicted RBP5.55□□□□□ -1.52
HIPK3-204ENST00000525975 LRRC8AQ8IWT6 810 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 SPATA32Q96LK8 384 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 KIAA1210Q9ULL0 1709 aa5.55□□□□□ -1.52
HIPK3-204ENST00000525975 PPRC1Q5VV67 1664 aaKnown RBP5.55□□□□□ -1.52
HIPK3-204ENST00000525975 ABCA6Q8N139 1617 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 CASTP20810 708 aaKnown RBP5.54□□□□□ -1.52
HIPK3-204ENST00000525975 GNL2Q13823 731 aaKnown RBP5.54□□□□□ -1.52
HIPK3-204ENST00000525975 ZRSR1Q15695 479 aaKnown RBP5.54□□□□□ -1.52
HIPK3-204ENST00000525975 ZSCAN26Q16670 478 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 LARP1BQ659C4 914 aaKnown RBP5.54□□□□□ -1.52
HIPK3-204ENST00000525975 SSH2Q76I76 1423 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 PLA2G4DQ86XP0 818 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 TDRD7Q8NHU6 1098 aaKnown RBP5.54□□□□□ -1.52
HIPK3-204ENST00000525975 OSBPL3Q9H4L5 887 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 ZNF219Q9P2Y4 722 aaPredicted RBP5.54□□□□□ -1.52
HIPK3-204ENST00000525975 CCDC144BQ3MJ40 725 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.54□□□□□ -1.52
HIPK3-204ENST00000525975 CCDC144CPQ8IYA2 1237 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 MTMR6Q9Y217 621 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 MAP3K4Q9Y6R4 1608 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 MYO1CO00159 1063 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 CASQ1P31415 396 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 LMAN1P49257 510 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 ARID5BQ14865 1188 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 LEKR1Q6ZMV7 388 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 PHACTR3Q96KR7 559 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms