RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 SERTAD1Q9UHV2 236 aa9.76□□□□□ -0.85
CSDE1-210ENST00000525878 PCDHGC4Q9Y5F7 938 aa9.76□□□□□ -0.85
CSDE1-210ENST00000525878 BMP4P12644 408 aa9.75□□□□□ -0.85
CSDE1-210ENST00000525878 HOXB4P17483 251 aaPredicted RBP9.75□□□□□ -0.85
CSDE1-210ENST00000525878 EML3Q32P44 896 aa9.75□□□□□ -0.85
CSDE1-210ENST00000525878 PLA2G4EQ3MJ16 856 aa9.75□□□□□ -0.85
CSDE1-210ENST00000525878 SKIP12755 728 aa9.74□□□□□ -0.85
CSDE1-210ENST00000525878 SLCO4C1Q6ZQN7 724 aa9.74□□□□□ -0.85
CSDE1-210ENST00000525878 ZDHHC3Q9NYG2 299 aa9.74□□□□□ -0.85
CSDE1-210ENST00000525878 NCOA4Q13772 614 aa9.73□□□□□ -0.85
CSDE1-210ENST00000525878 AIDAQ96BJ3 306 aa9.73□□□□□ -0.85
CSDE1-210ENST00000525878 GGA1Q9UJY5 639 aa9.73□□□□□ -0.85
CSDE1-210ENST00000525878 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
CSDE1-210ENST00000525878 A0A1W2PNR3 127 aa9.72□□□□□ -0.85
CSDE1-210ENST00000525878 ARAFP10398 606 aa9.72□□□□□ -0.85
CSDE1-210ENST00000525878 NBPF1Q3BBV0 1214 aa9.72□□□□□ -0.85
CSDE1-210ENST00000525878 FAM182BQ5T319 152 aa9.72□□□□□ -0.85
CSDE1-210ENST00000525878 BACH1O14867 736 aa9.71□□□□□ -0.86
CSDE1-210ENST00000525878 ATXN7O15265 892 aaPredicted RBP9.71□□□□□ -0.86
CSDE1-210ENST00000525878 EPHA4P54764 986 aa9.71□□□□□ -0.86
CSDE1-210ENST00000525878 GTF2IP78347 998 aa9.71□□□□□ -0.86
CSDE1-210ENST00000525878 TNP2Q05952 138 aa9.71□□□□□ -0.86
CSDE1-210ENST00000525878 ZIC5Q96T25 663 aa9.71□□□□□ -0.86
CSDE1-210ENST00000525878 ZNF358Q9NW07 568 aa9.71□□□□□ -0.86
CSDE1-210ENST00000525878 SCHIP1Q9P0W5 487 aaPredicted RBP9.71□□□□□ -0.86
CSDE1-210ENST00000525878 MKL2Q9ULH7 1088 aa9.71□□□□□ -0.86
CSDE1-210ENST00000525878 MAPTP10636 758 aaKnown RBP9.7□□□□□ -0.86
CSDE1-210ENST00000525878 LINC00114Q6XXX2 140 aa9.7□□□□□ -0.86
CSDE1-210ENST00000525878 WWC1Q8IX03 1113 aa9.7□□□□□ -0.86
CSDE1-210ENST00000525878 ADAMTS19Q8TE59 1207 aa9.7□□□□□ -0.86
CSDE1-210ENST00000525878 USP17L5A8MUK1 530 aa9.69□□□□□ -0.86
CSDE1-210ENST00000525878 EPXP11678 715 aa9.69□□□□□ -0.86
CSDE1-210ENST00000525878 TATP17735 454 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-210ENST00000525878 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.69□□□□□ -0.86
CSDE1-210ENST00000525878 ZDHHC1Q8WTX9 485 aa9.69□□□□□ -0.86
CSDE1-210ENST00000525878 CABP1Q9NZU7 370 aa9.69□□□□□ -0.86
CSDE1-210ENST00000525878 POM121CA8CG34 1229 aa9.68□□□□□ -0.86
CSDE1-210ENST00000525878 MSTNO14793 375 aa9.68□□□□□ -0.86
CSDE1-210ENST00000525878 PROCP04070 461 aa9.68□□□□□ -0.86
CSDE1-210ENST00000525878 FAM157BP0CG42 384 aa9.68□□□□□ -0.86
CSDE1-210ENST00000525878 FLIIQ13045 1269 aa9.68□□□□□ -0.86
CSDE1-210ENST00000525878 ARSJQ5FYB0 599 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-210ENST00000525878 SAMD5Q5TGI4 173 aa9.68□□□□□ -0.86
CSDE1-210ENST00000525878 BTBD6Q96KE9 485 aa9.68□□□□□ -0.86
CSDE1-210ENST00000525878 SPOCK3Q9BQ16 436 aa9.68□□□□□ -0.86
CSDE1-210ENST00000525878 AVENQ9NQS1 362 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-210ENST00000525878 KLF15Q9UIH9 416 aa9.68□□□□□ -0.86
CSDE1-210ENST00000525878 DCDC2BA2VCK2 349 aa9.67□□□□□ -0.86
CSDE1-210ENST00000525878 RAD21O60216 631 aa9.67□□□□□ -0.86
CSDE1-210ENST00000525878 COL8A1P27658 744 aa9.67□□□□□ -0.86
CSDE1-210ENST00000525878 TEAD4Q15561 434 aa9.67□□□□□ -0.86
CSDE1-210ENST00000525878 ALYREFQ86V81 257 aaKnown RBP9.67□□□□□ -0.86
CSDE1-210ENST00000525878 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
CSDE1-210ENST00000525878 KRBA1A5PL33 1030 aa9.66□□□□□ -0.86
CSDE1-210ENST00000525878 EFSO43281 561 aa9.66□□□□□ -0.86
CSDE1-210ENST00000525878 TXLNAP40222 546 aa9.66□□□□□ -0.86
CSDE1-210ENST00000525878 DEPDC4Q8N2C3 294 aa9.66□□□□□ -0.86
CSDE1-210ENST00000525878 C7orf43Q8WVR3 580 aa9.66□□□□□ -0.86
CSDE1-210ENST00000525878 UCN2Q96RP3 112 aa9.66□□□□□ -0.86
CSDE1-210ENST00000525878 PARP3Q9Y6F1 533 aa9.66□□□□□ -0.86
CSDE1-210ENST00000525878 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.86
CSDE1-210ENST00000525878 ZBTB7BO15156 539 aaPredicted RBP9.65□□□□□ -0.86
CSDE1-210ENST00000525878 L3MBTL2Q969R5 705 aa9.65□□□□□ -0.86
CSDE1-210ENST00000525878 RRAGCQ9HB90 399 aa9.65□□□□□ -0.86
CSDE1-210ENST00000525878 EML1O00423 815 aa9.64□□□□□ -0.87
CSDE1-210ENST00000525878 KHNYNO15037 678 aaKnown RBP9.64□□□□□ -0.87
CSDE1-210ENST00000525878 CD33P20138 364 aa9.64□□□□□ -0.87
CSDE1-210ENST00000525878 NOS2P35228 1153 aa9.64□□□□□ -0.87
CSDE1-210ENST00000525878 DGKGP49619 791 aa9.64□□□□□ -0.87
CSDE1-210ENST00000525878 PSME1Q06323 249 aa9.64□□□□□ -0.87
CSDE1-210ENST00000525878 KIAA1024Q9UPX6 916 aa9.64□□□□□ -0.87
CSDE1-210ENST00000525878 UBTFP17480 764 aaKnown RBP9.63□□□□□ -0.87
CSDE1-210ENST00000525878 ADH6P28332 368 aa9.63□□□□□ -0.87
CSDE1-210ENST00000525878 LAMC2Q13753 1193 aa9.63□□□□□ -0.87
CSDE1-210ENST00000525878 FCHSD1Q86WN1 690 aa9.63□□□□□ -0.87
CSDE1-210ENST00000525878 TRIM50Q86XT4 487 aa9.63□□□□□ -0.87
CSDE1-210ENST00000525878 SLC9A9Q8IVB4 645 aa9.63□□□□□ -0.87
CSDE1-210ENST00000525878 TNS4Q8IZW8 715 aa9.63□□□□□ -0.87
CSDE1-210ENST00000525878 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
CSDE1-210ENST00000525878 USP17L3A6NCW0 530 aa9.62□□□□□ -0.87
CSDE1-210ENST00000525878 USP17L4A6NCW7 530 aa9.62□□□□□ -0.87
CSDE1-210ENST00000525878 AMPD1P23109 780 aa9.62□□□□□ -0.87
CSDE1-210ENST00000525878 CLDN10P78369 228 aa9.62□□□□□ -0.87
CSDE1-210ENST00000525878 ZNF468Q5VIY5 522 aaPredicted RBP9.62□□□□□ -0.87
CSDE1-210ENST00000525878 USP17L2Q6R6M4 530 aa9.62□□□□□ -0.87
CSDE1-210ENST00000525878 USP17L1Q7RTZ2 530 aa9.62□□□□□ -0.87
CSDE1-210ENST00000525878 STRN4Q9NRL3 753 aa9.62□□□□□ -0.87
CSDE1-210ENST00000525878 GPC6Q9Y625 555 aaPredicted RBP9.62□□□□□ -0.87
CSDE1-210ENST00000525878 GNB5O14775 395 aa9.61□□□□□ -0.87
CSDE1-210ENST00000525878 HDGFL1Q5TGJ6 251 aa9.61□□□□□ -0.87
CSDE1-210ENST00000525878 POTEAQ6S8J7 498 aa9.61□□□□□ -0.87
CSDE1-210ENST00000525878 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
CSDE1-210ENST00000525878 CHSY3Q70JA7 882 aa9.61□□□□□ -0.87
CSDE1-210ENST00000525878 MARK1Q9P0L2 795 aa9.61□□□□□ -0.87
CSDE1-210ENST00000525878 ATP9BO43861 1147 aa9.6□□□□□ -0.87
CSDE1-210ENST00000525878 ATP1A2P50993 1020 aa9.6□□□□□ -0.87
CSDE1-210ENST00000525878 TPCN2Q8NHX9 752 aa9.6□□□□□ -0.87
CSDE1-210ENST00000525878 GJA3Q9Y6H8 435 aa9.6□□□□□ -0.87
CSDE1-210ENST00000525878 M0R2N6 131 aa9.59□□□□□ -0.87
CSDE1-210ENST00000525878 PIK3R2O00459 728 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms