RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 ECHDC1Q9NTX5 307 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 ASXL2Q76L83 1435 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 CHMP4BP1P59074 171 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 ODF2Q5BJF6 829 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.78□□□□□ -0.84
CHD7-203ENST00000525508 DZIP1Q86YF9 867 aaKnown RBP9.78□□□□□ -0.84
CHD7-203ENST00000525508 ZNF652Q9Y2D9 606 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 TNRQ92752 1358 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 ABCC11Q96J66 1382 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 KLHL10Q6JEL2 608 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 ZNF771Q7L3S4 317 aaPredicted RBP9.78□□□□□ -0.84
CHD7-203ENST00000525508 CCDC39Q9UFE4 941 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 KRT32Q14532 448 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 CKAP2LQ8IYA6 745 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 AKAP2Q9Y2D5 859 aa9.78□□□□□ -0.84
CHD7-203ENST00000525508 ANKRD18BA2A2Z9 1011 aa9.77□□□□□ -0.84
CHD7-203ENST00000525508 CWF19L2Q2TBE0 894 aaKnown RBP9.77□□□□□ -0.84
CHD7-203ENST00000525508 NUP62CLQ9H1M0 184 aa9.77□□□□□ -0.84
CHD7-203ENST00000525508 FAM135AQ9P2D6 1515 aa9.77□□□□□ -0.85
CHD7-203ENST00000525508 CAGE1Q8TC20 777 aa9.77□□□□□ -0.85
CHD7-203ENST00000525508 ZNF213O14771 459 aa9.77□□□□□ -0.85
CHD7-203ENST00000525508 FILIP1LQ4L180 1135 aa9.77□□□□□ -0.85
CHD7-203ENST00000525508 HELBQ8NG08 1087 aaPredicted RBP9.77□□□□□ -0.85
CHD7-203ENST00000525508 NUP153P49790 1475 aaKnown RBP9.77□□□□□ -0.85
CHD7-203ENST00000525508 DTNBO60941 627 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 LMBR1LQ6UX01 489 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 CUL7Q14999 1698 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 UBAP1LF5GYI3 381 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 SNRPA1P09661 255 aaKnown RBP9.76□□□□□ -0.85
CHD7-203ENST00000525508 MAP3K12Q12852 859 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 MICU3Q86XE3 530 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 CRACR2BQ8N4Y2 399 aaPredicted RBP9.76□□□□□ -0.85
CHD7-203ENST00000525508 NECAB1Q8N987 351 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 C8orf37Q96NL8 207 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 VAT1LQ9HCJ6 419 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 MAGEC2Q9UBF1 373 aaPredicted RBP9.76□□□□□ -0.85
CHD7-203ENST00000525508 RRP9O43818 475 aaKnown RBP9.76□□□□□ -0.85
CHD7-203ENST00000525508 ISM2Q6H9L7 571 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 RHPN1Q8TCX5 695 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 ZSCAN31Q96LW9 406 aaPredicted RBP9.76□□□□□ -0.85
CHD7-203ENST00000525508 CWC25Q9NXE8 425 aaPredicted RBP9.76□□□□□ -0.85
CHD7-203ENST00000525508 IFIT3O14879 490 aaKnown RBP9.76□□□□□ -0.85
CHD7-203ENST00000525508 DDX17Q92841 729 aaKnown RBP9.76□□□□□ -0.85
CHD7-203ENST00000525508 EYA1Q99502 592 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 CFAP45Q9UL16 551 aa9.76□□□□□ -0.85
CHD7-203ENST00000525508 SDSP20132 328 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 GPS2Q13227 327 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 HSP90AB3PQ58FF7 597 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 MAP7D2Q96T17 732 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 ZCRB1Q8TBF4 217 aaKnown RBP9.75□□□□□ -0.85
CHD7-203ENST00000525508 BIN1O00499 593 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 C8orf76Q96K31 380 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 JAG2Q9Y219 1238 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 PLCH2O75038 1416 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 SYCP2Q9BX26 1530 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 GOLGA8BA8MQT2 603 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 ZNF76P36508 570 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 TNPO1Q92973 898 aaKnown RBP9.75□□□□□ -0.85
CHD7-203ENST00000525508 ORAI2Q96SN7 254 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 PHAXQ9H814 394 aaKnown RBP9.75□□□□□ -0.85
CHD7-203ENST00000525508 PPIP5K1Q6PFW1 1433 aa9.75□□□□□ -0.85
CHD7-203ENST00000525508 CDKL5O76039 1030 aa9.74□□□□□ -0.85
CHD7-203ENST00000525508 GCP02774 474 aa9.74□□□□□ -0.85
CHD7-203ENST00000525508 RPGRQ92834 1020 aaKnown RBP9.74□□□□□ -0.85
CHD7-203ENST00000525508 PTPRCP08575 1304 aa9.74□□□□□ -0.85
CHD7-203ENST00000525508 F8W031 263 aaPredicted RBP9.74□□□□□ -0.85
CHD7-203ENST00000525508 LETM1O95202 739 aaPredicted RBP9.74□□□□□ -0.85
CHD7-203ENST00000525508 WDR78Q5VTH9 848 aa9.74□□□□□ -0.85
CHD7-203ENST00000525508 PDCL3Q9H2J4 239 aa9.74□□□□□ -0.85
CHD7-203ENST00000525508 NOL7Q9UMY1 257 aaKnown RBP9.74□□□□□ -0.85
CHD7-203ENST00000525508 SLC5A1P13866 664 aa9.74□□□□□ -0.85
CHD7-203ENST00000525508 ZNF622Q969S3 477 aaKnown RBP eCLIP9.74□□□□□ -0.853e-6■■■□□ 15
CHD7-203ENST00000525508 LIMCH1Q9UPQ0 1083 aa9.74□□□□□ -0.85
CHD7-203ENST00000525508 CFAP100Q494V2 611 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 MAP3K19Q56UN5 1328 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 ENOX2Q16206 610 aaKnown RBP9.73□□□□□ -0.85
CHD7-203ENST00000525508 NOM1Q5C9Z4 860 aaKnown RBP9.73□□□□□ -0.85
CHD7-203ENST00000525508 CHST3Q7LGC8 479 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 DEF6Q9H4E7 631 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 A2MP01023 1474 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 PLEKHH1Q9ULM0 1364 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 BMP2KLQ5H9B9 411 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 PPFIBP1Q86W92 1011 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 ZNF444Q8N0Y2 327 aaPredicted RBP9.73□□□□□ -0.85
CHD7-203ENST00000525508 BRF1Q92994 677 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 AK7Q96M32 723 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 RUFY1Q96T51 708 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 TMOD2Q9NZR1 351 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 STX8Q9UNK0 236 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 DMRT2Q9Y5R5 561 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 MAPKBP1O60336 1514 aa9.73□□□□□ -0.85
CHD7-203ENST00000525508 VAMP4O75379 141 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 ATP6V1AP38606 617 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 CCDC96Q2M329 555 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 G2E3Q7L622 706 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 CEP57L1Q8IYX8 460 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 CTCFLQ8NI51 663 aaPredicted RBP9.72□□□□□ -0.85
CHD7-203ENST00000525508 CIZ1Q9ULV3 898 aaPredicted RBP9.72□□□□□ -0.85
CHD7-203ENST00000525508 SLC12A7Q9Y666 1083 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 UHRF1BP1LA0JNW5 1464 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms