RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 NPC1L1Q9UHC9 1359 aa15.87■□□□□ 0.13
NDUFS3-204ENST00000525378 U2SURPO15042 1029 aaKnown RBP15.85■□□□□ 0.13
NDUFS3-204ENST00000525378 ZPR1O75312 459 aa15.85■□□□□ 0.13
NDUFS3-204ENST00000525378 CHRNA5P30532 468 aa15.85■□□□□ 0.13
NDUFS3-204ENST00000525378 PIM2Q9P1W9 311 aa15.85■□□□□ 0.13
NDUFS3-204ENST00000525378 COL15A1P39059 1388 aa15.85■□□□□ 0.13
NDUFS3-204ENST00000525378 HSPA6P17066 643 aa15.84■□□□□ 0.13
NDUFS3-204ENST00000525378 BCL2L12Q9HB09 334 aa15.84■□□□□ 0.13
NDUFS3-204ENST00000525378 NARFQ9UHQ1 456 aa15.84■□□□□ 0.13
NDUFS3-204ENST00000525378 DLEC1Q9Y238 1755 aa15.84■□□□□ 0.13
NDUFS3-204ENST00000525378 CCDC88AQ3V6T2 1871 aa15.83■□□□□ 0.12
NDUFS3-204ENST00000525378 NFIXQ14938 502 aa15.83■□□□□ 0.12
NDUFS3-204ENST00000525378 VSIG10Q8N0Z9 540 aa15.83■□□□□ 0.12
NDUFS3-204ENST00000525378 IL17REQ8NFR9 667 aa15.83■□□□□ 0.12
NDUFS3-204ENST00000525378 CANXP27824 592 aaKnown RBP15.82■□□□□ 0.12
NDUFS3-204ENST00000525378 DALRD3Q5D0E6 543 aaKnown RBP15.82■□□□□ 0.12
NDUFS3-204ENST00000525378 C9orf131Q5VYM1 1079 aa15.82■□□□□ 0.12
NDUFS3-204ENST00000525378 NMRK2Q9NPI5 230 aa15.81■□□□□ 0.12
NDUFS3-204ENST00000525378 ANKRD31Q8N7Z5 1873 aa15.8■□□□□ 0.12
NDUFS3-204ENST00000525378 GNAT3A8MTJ3 354 aa15.8■□□□□ 0.12
NDUFS3-204ENST00000525378 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
NDUFS3-204ENST00000525378 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
NDUFS3-204ENST00000525378 ZNF496Q96IT1 587 aaPredicted RBP15.8■□□□□ 0.12
NDUFS3-204ENST00000525378 HEG1Q9ULI3 1381 aa15.79■□□□□ 0.12
NDUFS3-204ENST00000525378 SERPINB2P05120 415 aa15.79■□□□□ 0.12
NDUFS3-204ENST00000525378 EIF5P55010 431 aaKnown RBP15.79■□□□□ 0.12
NDUFS3-204ENST00000525378 TEFQ10587 303 aa15.79■□□□□ 0.12
NDUFS3-204ENST00000525378 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
NDUFS3-204ENST00000525378 PHACTR3Q96KR7 559 aa15.79■□□□□ 0.12
NDUFS3-204ENST00000525378 SCN7AQ01118 1682 aa15.79■□□□□ 0.12
NDUFS3-204ENST00000525378 CARMIL3Q8ND23 1372 aa15.77■□□□□ 0.12
NDUFS3-204ENST00000525378 TOMM70O94826 608 aa15.77■□□□□ 0.12
NDUFS3-204ENST00000525378 STARD3NLO95772 234 aa15.77■□□□□ 0.12
NDUFS3-204ENST00000525378 PRKAR2BP31323 418 aa15.77■□□□□ 0.12
NDUFS3-204ENST00000525378 BICDL1Q6ZP65 573 aa15.77■□□□□ 0.12
NDUFS3-204ENST00000525378 RSPH6AQ9H0K4 717 aa15.77■□□□□ 0.12
NDUFS3-204ENST00000525378 RNF181Q9P0P0 153 aa15.77■□□□□ 0.12
NDUFS3-204ENST00000525378 CEMIPQ8WUJ3 1361 aa15.76■□□□□ 0.11
NDUFS3-204ENST00000525378 KCNQ3O43525 872 aa15.76■□□□□ 0.11
NDUFS3-204ENST00000525378 CEP350Q5VT06 3117 aa15.76■□□□□ 0.11
NDUFS3-204ENST00000525378 CACNA1SQ13698 1873 aa15.76■□□□□ 0.11
NDUFS3-204ENST00000525378 BCORQ6W2J9 1755 aa15.75■□□□□ 0.11
NDUFS3-204ENST00000525378 RASSF7Q02833 373 aa15.75■□□□□ 0.11
NDUFS3-204ENST00000525378 TBC1D9BQ66K14 1250 aa15.75■□□□□ 0.11
NDUFS3-204ENST00000525378 ZNF330Q9Y3S2 320 aaPredicted RBP15.75■□□□□ 0.11
NDUFS3-204ENST00000525378 TNRC6CQ9HCJ0 1690 aaKnown RBP15.75■□□□□ 0.11
NDUFS3-204ENST00000525378 COL11A2P13942 1736 aaPredicted RBP15.74■□□□□ 0.11
NDUFS3-204ENST00000525378 A0A087WZG4 1122 aa15.74■□□□□ 0.11
NDUFS3-204ENST00000525378 A1BGP04217 495 aa15.74■□□□□ 0.11
NDUFS3-204ENST00000525378 PRELPP51888 382 aa15.74■□□□□ 0.11
NDUFS3-204ENST00000525378 CFAP53Q96M91 514 aa15.74■□□□□ 0.11
NDUFS3-204ENST00000525378 FMNL2Q96PY5 1086 aa15.74■□□□□ 0.11
NDUFS3-204ENST00000525378 TEX13AQ9BXU3 409 aaPredicted RBP15.74■□□□□ 0.11
NDUFS3-204ENST00000525378 TBC1D2BQ9UPU7 963 aa15.74■□□□□ 0.11
NDUFS3-204ENST00000525378 DLG5Q8TDM6 1919 aa15.73■□□□□ 0.11
NDUFS3-204ENST00000525378 BTBD11A6QL63 1104 aa15.73■□□□□ 0.11
NDUFS3-204ENST00000525378 PPP2R1AP30153 589 aa15.73■□□□□ 0.11
NDUFS3-204ENST00000525378 C2CD5Q86YS7 1000 aa15.73■□□□□ 0.11
NDUFS3-204ENST00000525378 TIAM2Q8IVF5 1701 aa15.73■□□□□ 0.11
NDUFS3-204ENST00000525378 WDR90Q96KV7 1748 aa15.73■□□□□ 0.11
NDUFS3-204ENST00000525378 IL6STP40189 918 aaPredicted RBP15.72■□□□□ 0.11
NDUFS3-204ENST00000525378 CCDC24Q8N4L8 307 aa15.72■□□□□ 0.11
NDUFS3-204ENST00000525378 TTLL6Q8N841 843 aa15.72■□□□□ 0.11
NDUFS3-204ENST00000525378 RRAGCQ9HB90 399 aa15.72■□□□□ 0.11
NDUFS3-204ENST00000525378 DICER1Q9UPY3 1922 aaKnown RBP15.72■□□□□ 0.11
NDUFS3-204ENST00000525378 FER1L6Q2WGJ9 1857 aa15.71■□□□□ 0.11
NDUFS3-204ENST00000525378 PRAMEF22A3QJZ6 481 aa15.71■□□□□ 0.11
NDUFS3-204ENST00000525378 H0YIN7 160 aa15.71■□□□□ 0.11
NDUFS3-204ENST00000525378 U2AF1L5P0DN76 240 aaPredicted RBP15.71■□□□□ 0.11
NDUFS3-204ENST00000525378 APLP1P51693 650 aa15.71■□□□□ 0.11
NDUFS3-204ENST00000525378 U2AF1Q01081 240 aaKnown RBP eCLIP15.71■□□□□ 0.11
NDUFS3-204ENST00000525378 RBM46Q8TBY0 533 aaKnown RBP15.71■□□□□ 0.11
NDUFS3-204ENST00000525378 NUDCQ9Y266 331 aa15.71■□□□□ 0.11
NDUFS3-204ENST00000525378 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
NDUFS3-204ENST00000525378 KDM2BQ8NHM5 1336 aa15.7■□□□□ 0.1
NDUFS3-204ENST00000525378 CAMTA2O94983 1202 aa15.7■□□□□ 0.1
NDUFS3-204ENST00000525378 PIP4K2AP48426 406 aaPredicted RBP15.7■□□□□ 0.1
NDUFS3-204ENST00000525378 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
NDUFS3-204ENST00000525378 MCM10Q7L590 875 aa15.7■□□□□ 0.1
NDUFS3-204ENST00000525378 SLX4Q8IY92 1834 aa15.7■□□□□ 0.1
NDUFS3-204ENST00000525378 NFKBIEO00221 500 aa15.69■□□□□ 0.1
NDUFS3-204ENST00000525378 DCTN1Q14203 1278 aa15.69■□□□□ 0.1
NDUFS3-204ENST00000525378 C16orf71Q8IYS4 520 aaPredicted RBP15.69■□□□□ 0.1
NDUFS3-204ENST00000525378 ARFGEF2Q9Y6D5 1785 aa15.68■□□□□ 0.1
NDUFS3-204ENST00000525378 LMNB1P20700 586 aa15.68■□□□□ 0.1
NDUFS3-204ENST00000525378 DNAJC5GQ8N7S2 189 aa15.68■□□□□ 0.1
NDUFS3-204ENST00000525378 RTF1Q92541 710 aaKnown RBP15.68■□□□□ 0.1
NDUFS3-204ENST00000525378 ZNF622Q969S3 477 aaKnown RBP eCLIP15.68■□□□□ 0.1
NDUFS3-204ENST00000525378 BRIP1Q9BX63 1249 aa15.68■□□□□ 0.1
NDUFS3-204ENST00000525378 PDE6BP35913 854 aa15.67■□□□□ 0.1
NDUFS3-204ENST00000525378 DZIP3Q86Y13 1208 aaKnown RBP15.67■□□□□ 0.1
NDUFS3-204ENST00000525378 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
NDUFS3-204ENST00000525378 ZC3H4Q9UPT8 1303 aaKnown RBP15.67■□□□□ 0.1
NDUFS3-204ENST00000525378 HTRA3P83110 453 aa15.66■□□□□ 0.1
NDUFS3-204ENST00000525378 IFFO2Q5TF58 517 aa15.66■□□□□ 0.1
NDUFS3-204ENST00000525378 NPM2Q86SE8 214 aaKnown RBP15.66■□□□□ 0.1
NDUFS3-204ENST00000525378 SETDB2Q96T68 719 aa15.66■□□□□ 0.1
NDUFS3-204ENST00000525378 LAMB4A4D0S4 1761 aa15.66■□□□□ 0.1
NDUFS3-204ENST00000525378 GLTPD2A6NH11 291 aa15.65■□□□□ 0.1
NDUFS3-204ENST00000525378 C21orf2O43822 256 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms