RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 PGBD3Q8N328 593 aa11.11□□□□□ -0.63
COPB1-203ENST00000525214 C1orf216Q8TAB5 229 aa11.11□□□□□ -0.63
COPB1-203ENST00000525214 GTF3C3Q9Y5Q9 886 aa11.11□□□□□ -0.63
COPB1-203ENST00000525214 M0R2N6 131 aa11.1□□□□□ -0.63
COPB1-203ENST00000525214 LMOD1P29536 600 aaPredicted RBP11.1□□□□□ -0.63
COPB1-203ENST00000525214 CRTC2Q53ET0 693 aaPredicted RBP11.1□□□□□ -0.63
COPB1-203ENST00000525214 ZDHHC3Q9NYG2 299 aa11.1□□□□□ -0.63
COPB1-203ENST00000525214 IGF1RP08069 1367 aa11.1□□□□□ -0.63
COPB1-203ENST00000525214 TXLNAP40222 546 aa11.09□□□□□ -0.63
COPB1-203ENST00000525214 EFHC2Q5JST6 749 aa11.09□□□□□ -0.63
COPB1-203ENST00000525214 TSEN2Q8NCE0 465 aaKnown RBP11.09□□□□□ -0.63
COPB1-203ENST00000525214 CFHR5Q9BXR6 569 aa11.09□□□□□ -0.63
COPB1-203ENST00000525214 TSPAN10Q9H1Z9 355 aaPredicted RBP11.09□□□□□ -0.63
COPB1-203ENST00000525214 NDFIP2Q9NV92 336 aa11.09□□□□□ -0.63
COPB1-203ENST00000525214 PTK7Q13308 1070 aa11.08□□□□□ -0.64
COPB1-203ENST00000525214 TEAD4Q15561 434 aa11.08□□□□□ -0.64
COPB1-203ENST00000525214 NBPF1Q3BBV0 1214 aa11.08□□□□□ -0.64
COPB1-203ENST00000525214 SH3PXD2AQ5TCZ1 1133 aa11.08□□□□□ -0.64
COPB1-203ENST00000525214 LYPD4Q6UWN0 246 aa11.08□□□□□ -0.64
COPB1-203ENST00000525214 L3MBTL2Q969R5 705 aa11.08□□□□□ -0.64
COPB1-203ENST00000525214 ZMYND15Q9H091 742 aa11.08□□□□□ -0.64
COPB1-203ENST00000525214 NOS2P35228 1153 aa11.07□□□□□ -0.64
COPB1-203ENST00000525214 SVOPQ8N4V2 548 aa11.07□□□□□ -0.64
COPB1-203ENST00000525214 A0A1W2PNR3 127 aa11.06□□□□□ -0.64
COPB1-203ENST00000525214 BNIP3LO60238 219 aa11.06□□□□□ -0.64
COPB1-203ENST00000525214 ARHGEF15O94989 841 aa11.06□□□□□ -0.64
COPB1-203ENST00000525214 MX2P20592 715 aa11.06□□□□□ -0.64
COPB1-203ENST00000525214 ABHD17AQ96GS6 310 aa11.06□□□□□ -0.64
COPB1-203ENST00000525214 ZIC5Q96T25 663 aa11.06□□□□□ -0.64
COPB1-203ENST00000525214 FAM196BA6NMK8 535 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L15C9J2P7 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L10C9JJH3 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L13C9JLJ4 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L11C9JVI0 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L21D6R901 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L18D6R9N7 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L22D6RA61 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L17D6RBQ6 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L19D6RCP7 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L20D6RJB6 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 EML1O00423 815 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 USP17L24Q0WX57 530 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
COPB1-203ENST00000525214 NLRP8Q86W28 1048 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 ZCCHC2Q9C0B9 1178 aaKnown RBP11.05□□□□□ -0.64
COPB1-203ENST00000525214 VRTNQ9H8Y1 702 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 HCN2Q9UL51 889 aa11.05□□□□□ -0.64
COPB1-203ENST00000525214 ATXN7L1Q9ULK2 861 aaPredicted RBP11.05□□□□□ -0.64
COPB1-203ENST00000525214 C21orf2O43822 256 aa11.04□□□□□ -0.64
COPB1-203ENST00000525214 CELA2BP08218 269 aaPredicted RBP11.04□□□□□ -0.64
COPB1-203ENST00000525214 TATP17735 454 aaPredicted RBP11.04□□□□□ -0.64
COPB1-203ENST00000525214 SEC13P55735 322 aa11.04□□□□□ -0.64
COPB1-203ENST00000525214 DPYDQ12882 1025 aa11.04□□□□□ -0.64
COPB1-203ENST00000525214 ARSJQ5FYB0 599 aaPredicted RBP11.04□□□□□ -0.64
COPB1-203ENST00000525214 POTEAQ6S8J7 498 aa11.04□□□□□ -0.64
COPB1-203ENST00000525214 C7orf43Q8WVR3 580 aa11.04□□□□□ -0.64
COPB1-203ENST00000525214 ACDQ96AP0 544 aa11.04□□□□□ -0.64
COPB1-203ENST00000525214 KLRG1Q96E93 195 aa11.04□□□□□ -0.64
COPB1-203ENST00000525214 PHF24Q9UPV7 400 aa11.04□□□□□ -0.64
COPB1-203ENST00000525214 ARXQ96QS3 562 aa11.03□□□□□ -0.64
COPB1-203ENST00000525214 ADAMTS8Q9UP79 889 aa11.03□□□□□ -0.64
COPB1-203ENST00000525214 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
COPB1-203ENST00000525214 SERTM1A2A2V5 107 aa11.02□□□□□ -0.65
COPB1-203ENST00000525214 PSMA6P60900 246 aaKnown RBP11.02□□□□□ -0.65
COPB1-203ENST00000525214 FIGNL1Q6PIW4 674 aa11.02□□□□□ -0.65
COPB1-203ENST00000525214 ANKMY2Q8IV38 441 aa11.02□□□□□ -0.65
COPB1-203ENST00000525214 ZNF232Q9UNY5 417 aa11.02□□□□□ -0.65
COPB1-203ENST00000525214 PCDHGC4Q9Y5F7 938 aa11.02□□□□□ -0.65
COPB1-203ENST00000525214 C2CD2LO14523 706 aa11.01□□□□□ -0.65
COPB1-203ENST00000525214 FGFR3P22607 806 aa11.01□□□□□ -0.65
COPB1-203ENST00000525214 ATXN7O15265 892 aaPredicted RBP11□□□□□ -0.65
COPB1-203ENST00000525214 HIRAP54198 1017 aaPredicted RBP11□□□□□ -0.65
COPB1-203ENST00000525214 CTBSQ01459 385 aa11□□□□□ -0.65
COPB1-203ENST00000525214 DCDC2BA2VCK2 349 aa10.99□□□□□ -0.65
COPB1-203ENST00000525214 LGR5O75473 907 aa10.99□□□□□ -0.65
COPB1-203ENST00000525214 RFX1P22670 979 aa10.99□□□□□ -0.65
COPB1-203ENST00000525214 TNP2Q05952 138 aa10.99□□□□□ -0.65
COPB1-203ENST00000525214 CDCA8Q53HL2 280 aa10.99□□□□□ -0.65
COPB1-203ENST00000525214 BICDL1Q6ZP65 573 aa10.99□□□□□ -0.65
COPB1-203ENST00000525214 NSFL1CQ9UNZ2 370 aaKnown RBP10.99□□□□□ -0.65
COPB1-203ENST00000525214 PPP1R12BO60237 982 aaPredicted RBP10.98□□□□□ -0.65
COPB1-203ENST00000525214 MAP2K3P46734 347 aa10.98□□□□□ -0.65
COPB1-203ENST00000525214 SCG3Q8WXD2 468 aaKnown RBP10.98□□□□□ -0.65
COPB1-203ENST00000525214 ATAD2Q6PL18 1390 aa10.98□□□□□ -0.65
COPB1-203ENST00000525214 MAPTP10636 758 aaKnown RBP10.97□□□□□ -0.65
COPB1-203ENST00000525214 BCRP11274 1271 aa10.97□□□□□ -0.65
COPB1-203ENST00000525214 SAMD5Q5TGI4 173 aa10.97□□□□□ -0.65
COPB1-203ENST00000525214 C2orf49Q9BVC5 232 aaPredicted RBP10.97□□□□□ -0.65
COPB1-203ENST00000525214 OXCT2Q9BYC2 517 aaPredicted RBP10.97□□□□□ -0.65
COPB1-203ENST00000525214 HCN4Q9Y3Q4 1203 aa10.97□□□□□ -0.65
COPB1-203ENST00000525214 FAM157BP0CG42 384 aa10.96□□□□□ -0.65
COPB1-203ENST00000525214 MAP3K10Q02779 954 aa10.96□□□□□ -0.65
COPB1-203ENST00000525214 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
COPB1-203ENST00000525214 GAS2L2Q8NHY3 880 aa10.96□□□□□ -0.65
COPB1-203ENST00000525214 PHACTR1Q9C0D0 580 aa10.96□□□□□ -0.65
COPB1-203ENST00000525214 GPC6Q9Y625 555 aaPredicted RBP10.96□□□□□ -0.65
COPB1-203ENST00000525214 KHNYNO15037 678 aaKnown RBP10.95□□□□□ -0.66
COPB1-203ENST00000525214 EFSO43281 561 aa10.95□□□□□ -0.66
COPB1-203ENST00000525214 BMP4P12644 408 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms