RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 AFDNP55196 1824 aaKnown RBP14.84□□□□□ -0.03
TRAPPC4-204ENST00000524797 MYBBP1AQ9BQG0 1328 aaKnown RBP14.84□□□□□ -0.03
TRAPPC4-204ENST00000524797 DCTN1Q14203 1278 aa14.84□□□□□ -0.03
TRAPPC4-204ENST00000524797 FMNL2Q96PY5 1086 aa14.84□□□□□ -0.03
TRAPPC4-204ENST00000524797 FKBP8Q14318 412 aa14.83□□□□□ -0.04
TRAPPC4-204ENST00000524797 PARP3Q9Y6F1 533 aa14.83□□□□□ -0.04
TRAPPC4-204ENST00000524797 SCN7AQ01118 1682 aa14.83□□□□□ -0.04
TRAPPC4-204ENST00000524797 BRCA1P38398 1863 aaKnown RBP14.83□□□□□ -0.04
TRAPPC4-204ENST00000524797 STARD3NLO95772 234 aa14.82□□□□□ -0.04
TRAPPC4-204ENST00000524797 NEFMP07197 916 aa14.82□□□□□ -0.04
TRAPPC4-204ENST00000524797 TEX13AQ9BXU3 409 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC4-204ENST00000524797 PXDNLA1KZ92 1463 aa14.82□□□□□ -0.04
TRAPPC4-204ENST00000524797 LAMB4A4D0S4 1761 aa14.82□□□□□ -0.04
TRAPPC4-204ENST00000524797 CANXP27824 592 aaKnown RBP14.82□□□□□ -0.04
TRAPPC4-204ENST00000524797 ZEB1P37275 1124 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC4-204ENST00000524797 NFE2L2Q16236 605 aa14.82□□□□□ -0.04
TRAPPC4-204ENST00000524797 USPL1Q5W0Q7 1092 aa14.82□□□□□ -0.04
TRAPPC4-204ENST00000524797 NARFQ9UHQ1 456 aa14.82□□□□□ -0.04
TRAPPC4-204ENST00000524797 NRXN2Q9P2S2 1712 aa14.81□□□□□ -0.04
TRAPPC4-204ENST00000524797 GRIN3BO60391 1043 aa14.81□□□□□ -0.04
TRAPPC4-204ENST00000524797 ZPR1O75312 459 aa14.81□□□□□ -0.04
TRAPPC4-204ENST00000524797 DDR1Q08345 913 aa14.81□□□□□ -0.04
TRAPPC4-204ENST00000524797 PNNQ9H307 717 aaKnown RBP14.81□□□□□ -0.04
TRAPPC4-204ENST00000524797 BCORQ6W2J9 1755 aa14.81□□□□□ -0.04
TRAPPC4-204ENST00000524797 EIF5P55010 431 aaKnown RBP14.8□□□□□ -0.04
TRAPPC4-204ENST00000524797 MAPK8IP3Q9UPT6 1336 aa14.8□□□□□ -0.04
TRAPPC4-204ENST00000524797 TM4SF1P30408 202 aa14.8□□□□□ -0.04
TRAPPC4-204ENST00000524797 BCL2L12Q9HB09 334 aa14.79□□□□□ -0.04
TRAPPC4-204ENST00000524797 A0A087WZG4 1122 aa14.78□□□□□ -0.04
TRAPPC4-204ENST00000524797 POLRMTO00411 1230 aaKnown RBP14.78□□□□□ -0.04
TRAPPC4-204ENST00000524797 TAF7Q15545 349 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC4-204ENST00000524797 A1BGP04217 495 aa14.78□□□□□ -0.04
TRAPPC4-204ENST00000524797 TGFB2P61812 414 aa14.78□□□□□ -0.04
TRAPPC4-204ENST00000524797 ARFGEF1Q9Y6D6 1849 aa14.77□□□□□ -0.04
TRAPPC4-204ENST00000524797 IL6STP40189 918 aaPredicted RBP14.77□□□□□ -0.04
TRAPPC4-204ENST00000524797 WWC3Q9ULE0 1092 aa14.77□□□□□ -0.04
TRAPPC4-204ENST00000524797 PRAMEF22A3QJZ6 481 aa14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 SNRPA1P09661 255 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 DPEP1P16444 411 aa14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 NFIXQ14938 502 aa14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 ZNF784Q8NCA9 323 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 PRKRIP1Q9H875 184 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 USP16Q9Y5T5 823 aa14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 DLEC1Q9Y238 1755 aa14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 A0A0G2JLW4 131 aa14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 PNISRQ8TF01 805 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 THUMPD2Q9BTF0 503 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 MIS18AQ9NYP9 233 aa14.76□□□□□ -0.05
TRAPPC4-204ENST00000524797 ANKRD31Q8N7Z5 1873 aa14.75□□□□□ -0.05
TRAPPC4-204ENST00000524797 ZNF330Q9Y3S2 320 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC4-204ENST00000524797 TBC1D2BQ9UPU7 963 aa14.74□□□□□ -0.05
TRAPPC4-204ENST00000524797 TMPOP42166 694 aaKnown RBP14.73□□□□□ -0.05
TRAPPC4-204ENST00000524797 RIPK4P57078 832 aa14.73□□□□□ -0.05
TRAPPC4-204ENST00000524797 SERPINB2P05120 415 aa14.72□□□□□ -0.05
TRAPPC4-204ENST00000524797 KCNA3P22001 575 aa14.72□□□□□ -0.05
TRAPPC4-204ENST00000524797 PIP4K2AP48426 406 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC4-204ENST00000524797 WDR43Q15061 677 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRAPPC4-204ENST00000524797 CCDC146Q8IYE0 955 aa14.72□□□□□ -0.05
TRAPPC4-204ENST00000524797 CAMTA2O94983 1202 aa14.72□□□□□ -0.05
TRAPPC4-204ENST00000524797 TBC1D9BQ66K14 1250 aa14.72□□□□□ -0.05
TRAPPC4-204ENST00000524797 BCS1LQ9Y276 419 aa14.72□□□□□ -0.05
TRAPPC4-204ENST00000524797 NBPF26B4DH59 902 aa14.71□□□□□ -0.05
TRAPPC4-204ENST00000524797 EIF4A1P60842 406 aaKnown RBP14.71□□□□□ -0.05
TRAPPC4-204ENST00000524797 NBPF10Q6P3W6 841 aaKnown RBP14.71□□□□□ -0.05
TRAPPC4-204ENST00000524797 BICDL1Q6ZP65 573 aa14.71□□□□□ -0.05
TRAPPC4-204ENST00000524797 NPM2Q86SE8 214 aaKnown RBP14.71□□□□□ -0.05
TRAPPC4-204ENST00000524797 NBPF15Q8N660 670 aa14.71□□□□□ -0.05
TRAPPC4-204ENST00000524797 CHRNA5P30532 468 aa14.7□□□□□ -0.06
TRAPPC4-204ENST00000524797 LMOD3Q0VAK6 560 aa14.7□□□□□ -0.06
TRAPPC4-204ENST00000524797 DZIP3Q86Y13 1208 aaKnown RBP14.7□□□□□ -0.06
TRAPPC4-204ENST00000524797 RUNDC1Q96C34 613 aa14.7□□□□□ -0.06
TRAPPC4-204ENST00000524797 PIM2Q9P1W9 311 aa14.7□□□□□ -0.06
TRAPPC4-204ENST00000524797 ADAMTS8Q9UP79 889 aa14.7□□□□□ -0.06
TRAPPC4-204ENST00000524797 RRP7AQ9Y3A4 280 aaKnown RBP14.7□□□□□ -0.06
TRAPPC4-204ENST00000524797 CARMIL3Q8ND23 1372 aa14.7□□□□□ -0.06
TRAPPC4-204ENST00000524797 COL11A2P13942 1736 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC4-204ENST00000524797 NUP98P52948 1817 aa14.69□□□□□ -0.06
TRAPPC4-204ENST00000524797 ADCY9O60503 1353 aa14.69□□□□□ -0.06
TRAPPC4-204ENST00000524797 GIGYF1O75420 1035 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC4-204ENST00000524797 TSPYL4Q9UJ04 414 aa14.68□□□□□ -0.06
TRAPPC4-204ENST00000524797 ATP10DQ9P241 1426 aa14.68□□□□□ -0.06
TRAPPC4-204ENST00000524797 DALRD3Q5D0E6 543 aaKnown RBP14.67□□□□□ -0.06
TRAPPC4-204ENST00000524797 BABAM1Q9NWV8 329 aa14.67□□□□□ -0.06
TRAPPC4-204ENST00000524797 SBF1O95248 1867 aa14.67□□□□□ -0.06
TRAPPC4-204ENST00000524797 CACNA1SQ13698 1873 aa14.66□□□□□ -0.06
TRAPPC4-204ENST00000524797 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC4-204ENST00000524797 NEUROD2Q15784 382 aa14.66□□□□□ -0.06
TRAPPC4-204ENST00000524797 TRIM35Q9UPQ4 493 aa14.66□□□□□ -0.06
TRAPPC4-204ENST00000524797 ARFGEF2Q9Y6D5 1785 aa14.66□□□□□ -0.06
TRAPPC4-204ENST00000524797 PRR5LQ6MZQ0 368 aa14.66□□□□□ -0.06
TRAPPC4-204ENST00000524797 ARHGAP27Q6ZUM4 889 aa14.66□□□□□ -0.06
TRAPPC4-204ENST00000524797 C2CD5Q86YS7 1000 aa14.66□□□□□ -0.06
TRAPPC4-204ENST00000524797 SETDB2Q96T68 719 aa14.66□□□□□ -0.06
TRAPPC4-204ENST00000524797 RGL2O15211 777 aa14.65□□□□□ -0.06
TRAPPC4-204ENST00000524797 CLEC4GQ6UXB4 293 aa14.65□□□□□ -0.06
TRAPPC4-204ENST00000524797 ZNF652Q9Y2D9 606 aa14.65□□□□□ -0.06
TRAPPC4-204ENST00000524797 CCDC88AQ3V6T2 1871 aa14.64□□□□□ -0.07
TRAPPC4-204ENST00000524797 CCDC24Q8N4L8 307 aa14.64□□□□□ -0.07
TRAPPC4-204ENST00000524797 BRIP1Q9BX63 1249 aa14.64□□□□□ -0.07
TRAPPC4-204ENST00000524797 ERBB4Q15303 1308 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms