RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PHAXQ9H814 394 aaKnown RBP15.87■□□□□ 0.13
CAPN1-202ENST00000524773 ATP7BP35670 1465 aa15.87■□□□□ 0.13
CAPN1-202ENST00000524773 PLEKHG5O94827 1062 aa15.87■□□□□ 0.13
CAPN1-202ENST00000524773 ATP2B3Q16720 1220 aa15.87■□□□□ 0.13
CAPN1-202ENST00000524773 RUFY3Q7L099 469 aa15.87■□□□□ 0.13
CAPN1-202ENST00000524773 MYRIPQ8NFW9 859 aa15.87■□□□□ 0.13
CAPN1-202ENST00000524773 STK31Q9BXU1 1019 aa15.87■□□□□ 0.13
CAPN1-202ENST00000524773 CPSF1Q10570 1443 aaKnown RBP15.87■□□□□ 0.13
CAPN1-202ENST00000524773 ANXA1P04083 346 aa15.87■□□□□ 0.13
CAPN1-202ENST00000524773 CCT4P50991 539 aaKnown RBP15.87■□□□□ 0.13
CAPN1-202ENST00000524773 NECAB1Q8N987 351 aa15.87■□□□□ 0.13
CAPN1-202ENST00000524773 WDR33Q9C0J8 1336 aaKnown RBP15.87■□□□□ 0.13
CAPN1-202ENST00000524773 PIBF1Q8WXW3 757 aa15.86■□□□□ 0.13
CAPN1-202ENST00000524773 TCEANC2Q96MN5 208 aa15.86■□□□□ 0.13
CAPN1-202ENST00000524773 SNX14Q9Y5W7 946 aa15.86■□□□□ 0.13
CAPN1-202ENST00000524773 UBR1Q8IWV7 1749 aa15.86■□□□□ 0.13
CAPN1-202ENST00000524773 VPS37CA5D8V6 355 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-202ENST00000524773 PPP4R3BQ5MIZ7 849 aa15.86■□□□□ 0.13
CAPN1-202ENST00000524773 MAP7D2Q96T17 732 aa15.86■□□□□ 0.13
CAPN1-202ENST00000524773 DLC1Q96QB1 1528 aa15.86■□□□□ 0.13
CAPN1-202ENST00000524773 EIF2S2P20042 333 aaKnown RBP15.85■□□□□ 0.13
CAPN1-202ENST00000524773 MCM2P49736 904 aa15.85■□□□□ 0.13
CAPN1-202ENST00000524773 KCNF1Q9H3M0 494 aa15.85■□□□□ 0.13
CAPN1-202ENST00000524773 ATP8B2P98198 1209 aa15.85■□□□□ 0.13
CAPN1-202ENST00000524773 ADCK5Q3MIX3 580 aa15.85■□□□□ 0.13
CAPN1-202ENST00000524773 CCDC183Q5T5S1 534 aa15.85■□□□□ 0.13
CAPN1-202ENST00000524773 INTS4Q96HW7 963 aaKnown RBP15.85■□□□□ 0.13
CAPN1-202ENST00000524773 CRB1P82279 1406 aa15.85■□□□□ 0.13
CAPN1-202ENST00000524773 FER1L4A9Z1Z3 1794 aa15.84■□□□□ 0.13
CAPN1-202ENST00000524773 KIAA0232Q92628 1395 aa15.84■□□□□ 0.13
CAPN1-202ENST00000524773 STX6O43752 255 aa15.84■□□□□ 0.13
CAPN1-202ENST00000524773 ZSCAN22P10073 491 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-202ENST00000524773 CASTP20810 708 aaKnown RBP15.84■□□□□ 0.13
CAPN1-202ENST00000524773 USP44Q9H0E7 712 aa15.84■□□□□ 0.13
CAPN1-202ENST00000524773 SETD1AO15047 1707 aaKnown RBP15.84■□□□□ 0.13
CAPN1-202ENST00000524773 ACEP12821 1306 aa15.84■□□□□ 0.13
CAPN1-202ENST00000524773 HSPA4P34932 840 aa15.84■□□□□ 0.13
CAPN1-202ENST00000524773 C3P01024 1663 aa15.84■□□□□ 0.13
CAPN1-202ENST00000524773 NRXN3Q9Y4C0 1643 aa15.84■□□□□ 0.13
CAPN1-202ENST00000524773 PPP1R42Q7Z4L9 355 aa15.84■□□□□ 0.13
CAPN1-202ENST00000524773 CCDC94Q9BW85 323 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-202ENST00000524773 DNAJC5Q9H3Z4 198 aa15.84■□□□□ 0.13
CAPN1-202ENST00000524773 RIMS1Q86UR5 1692 aaKnown RBP15.84■□□□□ 0.13
CAPN1-202ENST00000524773 PHF14O94880 888 aa15.83■□□□□ 0.12
CAPN1-202ENST00000524773 BCL2L12Q9HB09 334 aa15.83■□□□□ 0.12
CAPN1-202ENST00000524773 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
CAPN1-202ENST00000524773 AATKQ6ZMQ8 1374 aa15.83■□□□□ 0.12
CAPN1-202ENST00000524773 TTC21BQ7Z4L5 1316 aa15.83■□□□□ 0.12
CAPN1-202ENST00000524773 KDM4AO75164 1064 aa15.83■□□□□ 0.12
CAPN1-202ENST00000524773 USHBP1Q8N6Y0 703 aa15.83■□□□□ 0.12
CAPN1-202ENST00000524773 LTKP29376 864 aa15.82■□□□□ 0.12
CAPN1-202ENST00000524773 PTH1RQ03431 593 aa15.82■□□□□ 0.12
CAPN1-202ENST00000524773 CKAP2LQ8IYA6 745 aa15.82■□□□□ 0.12
CAPN1-202ENST00000524773 SOS1Q07889 1333 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-202ENST00000524773 NBPF7P0C2Y1 421 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-202ENST00000524773 UBTFL1P0CB47 393 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-202ENST00000524773 GJB2P29033 226 aa15.82■□□□□ 0.12
CAPN1-202ENST00000524773 HAP1P54257 671 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-202ENST00000524773 SRGAP3O43295 1099 aa15.81■□□□□ 0.12
CAPN1-202ENST00000524773 F13A1P00488 732 aa15.81■□□□□ 0.12
CAPN1-202ENST00000524773 NAA30Q147X3 362 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-202ENST00000524773 EID1Q9Y6B2 187 aa15.81■□□□□ 0.12
CAPN1-202ENST00000524773 RIOK3O14730 519 aaKnown RBP15.81■□□□□ 0.12
CAPN1-202ENST00000524773 ANAPC15P60006 121 aa15.81■□□□□ 0.12
CAPN1-202ENST00000524773 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
CAPN1-202ENST00000524773 U2AF2P26368 475 aaKnown RBP eCLIP15.81■□□□□ 0.12
CAPN1-202ENST00000524773 LRMPQ12912 555 aa15.81■□□□□ 0.12
CAPN1-202ENST00000524773 EYA1Q99502 592 aa15.81■□□□□ 0.12
CAPN1-202ENST00000524773 PTGS1P23219 599 aa15.8■□□□□ 0.12
CAPN1-202ENST00000524773 LUZP1Q86V48 1076 aa15.8■□□□□ 0.12
CAPN1-202ENST00000524773 JAKMIP1Q96N16 626 aaKnown RBP15.8■□□□□ 0.12
CAPN1-202ENST00000524773 KIF3AQ9Y496 699 aa15.8■□□□□ 0.12
CAPN1-202ENST00000524773 GNAI3P08754 354 aa15.8■□□□□ 0.12
CAPN1-202ENST00000524773 ZSCAN20P17040 1043 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-202ENST00000524773 PI4K2BQ8TCG2 481 aa15.8■□□□□ 0.12
CAPN1-202ENST00000524773 LSG1Q9H089 658 aaKnown RBP15.8■□□□□ 0.12
CAPN1-202ENST00000524773 NRBP1Q9UHY1 535 aa15.8■□□□□ 0.12
CAPN1-202ENST00000524773 SGSM2O43147 1006 aa15.79■□□□□ 0.12
CAPN1-202ENST00000524773 UBE2HP62256 183 aa15.79■□□□□ 0.12
CAPN1-202ENST00000524773 TTC14Q96N46 770 aa15.79■□□□□ 0.12
CAPN1-202ENST00000524773 TFIP11Q9UBB9 837 aaKnown RBP15.79■□□□□ 0.12
CAPN1-202ENST00000524773 A0A0U1RQG5 324 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-202ENST00000524773 RHPN1Q8TCX5 695 aa15.79■□□□□ 0.12
CAPN1-202ENST00000524773 AMPHP49418 695 aa15.78■□□□□ 0.12
CAPN1-202ENST00000524773 THEMISQ8N1K5 641 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-202ENST00000524773 STAP2Q9UGK3 403 aa15.78■□□□□ 0.12
CAPN1-202ENST00000524773 LIMCH1Q9UPQ0 1083 aa15.78■□□□□ 0.12
CAPN1-202ENST00000524773 LIG1P18858 919 aa15.78■□□□□ 0.12
CAPN1-202ENST00000524773 ST3GAL1Q11201 340 aa15.78■□□□□ 0.12
CAPN1-202ENST00000524773 OS9Q13438 667 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-202ENST00000524773 SMAP1Q8IYB5 467 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-202ENST00000524773 RAD50Q92878 1312 aa15.78■□□□□ 0.12
CAPN1-202ENST00000524773 PA2G4Q9UQ80 394 aaKnown RBP15.78■□□□□ 0.12
CAPN1-202ENST00000524773 TAF6LQ9Y6J9 622 aa15.78■□□□□ 0.12
CAPN1-202ENST00000524773 PLEKHG1Q9ULL1 1385 aa15.77■□□□□ 0.12
CAPN1-202ENST00000524773 STK3Q13188 491 aa15.77■□□□□ 0.12
CAPN1-202ENST00000524773 CCDC30Q5VVM6 783 aa15.77■□□□□ 0.12
CAPN1-202ENST00000524773 MTMR6Q9Y217 621 aa15.77■□□□□ 0.12
CAPN1-202ENST00000524773 A0A087WWV3 80 aa15.77■□□□□ 0.11
CAPN1-202ENST00000524773 PPFIA3O75145 1194 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms