RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
CAPN11-202ENST00000524554 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
CAPN11-202ENST00000524554 ZPR1O75312 459 aa12.93□□□□□ -0.34
CAPN11-202ENST00000524554 NEFLP07196 543 aa12.93□□□□□ -0.34
CAPN11-202ENST00000524554 CHRNA5P30532 468 aa12.93□□□□□ -0.34
CAPN11-202ENST00000524554 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
CAPN11-202ENST00000524554 ZBTB1Q9Y2K1 713 aa12.93□□□□□ -0.34
CAPN11-202ENST00000524554 U2SURPO15042 1029 aaKnown RBP12.92□□□□□ -0.34
CAPN11-202ENST00000524554 NFIXQ14938 502 aa12.92□□□□□ -0.34
CAPN11-202ENST00000524554 NARFQ9UHQ1 456 aa12.92□□□□□ -0.34
CAPN11-202ENST00000524554 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
CAPN11-202ENST00000524554 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
CAPN11-202ENST00000524554 CEP350Q5VT06 3117 aa12.9□□□□□ -0.34
CAPN11-202ENST00000524554 HSPA6P17066 643 aa12.9□□□□□ -0.34
CAPN11-202ENST00000524554 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
CAPN11-202ENST00000524554 DALRD3Q5D0E6 543 aaKnown RBP12.9□□□□□ -0.34
CAPN11-202ENST00000524554 C9orf131Q5VYM1 1079 aa12.9□□□□□ -0.34
CAPN11-202ENST00000524554 ZNF496Q96IT1 587 aaPredicted RBP12.9□□□□□ -0.34
CAPN11-202ENST00000524554 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
CAPN11-202ENST00000524554 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
CAPN11-202ENST00000524554 EIF5P55010 431 aaKnown RBP12.89□□□□□ -0.35
CAPN11-202ENST00000524554 KCNQ3O43525 872 aa12.88□□□□□ -0.35
CAPN11-202ENST00000524554 SERPINB2P05120 415 aa12.88□□□□□ -0.35
CAPN11-202ENST00000524554 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
CAPN11-202ENST00000524554 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
CAPN11-202ENST00000524554 NMRK2Q9NPI5 230 aa12.88□□□□□ -0.35
CAPN11-202ENST00000524554 MYH14Q7Z406 1995 aaKnown RBP12.88□□□□□ -0.35
CAPN11-202ENST00000524554 STARD3NLO95772 234 aa12.88□□□□□ -0.35
CAPN11-202ENST00000524554 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
CAPN11-202ENST00000524554 COL15A1P39059 1388 aa12.86□□□□□ -0.35
CAPN11-202ENST00000524554 TOMM70O94826 608 aa12.86□□□□□ -0.35
CAPN11-202ENST00000524554 A1BGP04217 495 aa12.86□□□□□ -0.35
CAPN11-202ENST00000524554 TEFQ10587 303 aa12.86□□□□□ -0.35
CAPN11-202ENST00000524554 TTC5Q8N0Z6 440 aa12.86□□□□□ -0.35
CAPN11-202ENST00000524554 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
CAPN11-202ENST00000524554 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
CAPN11-202ENST00000524554 COL3A1P02461 1466 aaPredicted RBP12.86□□□□□ -0.35
CAPN11-202ENST00000524554 MRC1P22897 1456 aa12.86□□□□□ -0.35
CAPN11-202ENST00000524554 KCPQ6ZWJ8 1503 aa12.85□□□□□ -0.35
CAPN11-202ENST00000524554 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
CAPN11-202ENST00000524554 PRELPP51888 382 aa12.85□□□□□ -0.35
CAPN11-202ENST00000524554 TBC1D9BQ66K14 1250 aa12.85□□□□□ -0.35
CAPN11-202ENST00000524554 BICDL1Q6ZP65 573 aa12.85□□□□□ -0.35
CAPN11-202ENST00000524554 TEX13AQ9BXU3 409 aaPredicted RBP12.85□□□□□ -0.35
CAPN11-202ENST00000524554 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
CAPN11-202ENST00000524554 TBC1D2BQ9UPU7 963 aa12.85□□□□□ -0.35
CAPN11-202ENST00000524554 C4AP0C0L4 1744 aa12.85□□□□□ -0.35
CAPN11-202ENST00000524554 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
CAPN11-202ENST00000524554 RNF181Q9P0P0 153 aa12.84□□□□□ -0.35
CAPN11-202ENST00000524554 NUDCQ9Y266 331 aa12.84□□□□□ -0.35
CAPN11-202ENST00000524554 USP16Q9Y5T5 823 aa12.84□□□□□ -0.35
CAPN11-202ENST00000524554 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
CAPN11-202ENST00000524554 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
CAPN11-202ENST00000524554 KIAA1551Q9HCM1 1747 aa12.84□□□□□ -0.35
CAPN11-202ENST00000524554 BTBD11A6QL63 1104 aa12.83□□□□□ -0.35
CAPN11-202ENST00000524554 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.35
CAPN11-202ENST00000524554 DNAJC5GQ8N7S2 189 aa12.83□□□□□ -0.35
CAPN11-202ENST00000524554 A0A087WZG4 1122 aa12.83□□□□□ -0.36
CAPN11-202ENST00000524554 PRAMEF22A3QJZ6 481 aa12.83□□□□□ -0.36
CAPN11-202ENST00000524554 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
CAPN11-202ENST00000524554 TTLL6Q8N841 843 aa12.83□□□□□ -0.36
CAPN11-202ENST00000524554 FMNL2Q96PY5 1086 aa12.83□□□□□ -0.36
CAPN11-202ENST00000524554 RRAGCQ9HB90 399 aa12.83□□□□□ -0.36
CAPN11-202ENST00000524554 TJP1Q07157 1748 aa12.82□□□□□ -0.36
CAPN11-202ENST00000524554 KIF13BQ9NQT8 1826 aa12.82□□□□□ -0.36
CAPN11-202ENST00000524554 ADAMTS7Q9UKP4 1686 aa12.82□□□□□ -0.36
CAPN11-202ENST00000524554 U2AF1L5P0DN76 240 aaPredicted RBP12.82□□□□□ -0.36
CAPN11-202ENST00000524554 IL6STP40189 918 aaPredicted RBP12.82□□□□□ -0.36
CAPN11-202ENST00000524554 U2AF1Q01081 240 aaKnown RBP eCLIP12.82□□□□□ -0.36
CAPN11-202ENST00000524554 RASSF7Q02833 373 aa12.82□□□□□ -0.36
CAPN11-202ENST00000524554 SUPT16HQ9Y5B9 1047 aaKnown RBP12.82□□□□□ -0.36
CAPN11-202ENST00000524554 N4BP2Q86UW6 1770 aaPredicted RBP12.82□□□□□ -0.36
CAPN11-202ENST00000524554 H0YIN7 160 aa12.81□□□□□ -0.36
CAPN11-202ENST00000524554 CAMTA2O94983 1202 aa12.81□□□□□ -0.36
CAPN11-202ENST00000524554 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
CAPN11-202ENST00000524554 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
CAPN11-202ENST00000524554 MCM10Q7L590 875 aa12.81□□□□□ -0.36
CAPN11-202ENST00000524554 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
CAPN11-202ENST00000524554 SCN11AQ9UI33 1791 aa12.8□□□□□ -0.36
CAPN11-202ENST00000524554 APLP1P51693 650 aa12.8□□□□□ -0.36
CAPN11-202ENST00000524554 ERICH6BQ5W0A0 696 aa12.8□□□□□ -0.36
CAPN11-202ENST00000524554 PRR5LQ6MZQ0 368 aa12.8□□□□□ -0.36
CAPN11-202ENST00000524554 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
CAPN11-202ENST00000524554 CARMIL3Q8ND23 1372 aa12.8□□□□□ -0.36
CAPN11-202ENST00000524554 NFKBIEO00221 500 aa12.79□□□□□ -0.36
CAPN11-202ENST00000524554 RBM46Q8TBY0 533 aaKnown RBP12.79□□□□□ -0.36
CAPN11-202ENST00000524554 LMNB1P20700 586 aa12.78□□□□□ -0.36
CAPN11-202ENST00000524554 ZNF622Q969S3 477 aaKnown RBP eCLIP12.78□□□□□ -0.36
CAPN11-202ENST00000524554 SETDB2Q96T68 719 aa12.78□□□□□ -0.36
CAPN11-202ENST00000524554 KDM2BQ8NHM5 1336 aa12.78□□□□□ -0.36
CAPN11-202ENST00000524554 NBPF26B4DH59 902 aa12.78□□□□□ -0.36
CAPN11-202ENST00000524554 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
CAPN11-202ENST00000524554 HTRA3P83110 453 aa12.78□□□□□ -0.36
CAPN11-202ENST00000524554 NBPF10Q6P3W6 841 aaKnown RBP12.78□□□□□ -0.36
CAPN11-202ENST00000524554 DZIP3Q86Y13 1208 aaKnown RBP12.78□□□□□ -0.36
CAPN11-202ENST00000524554 NBPF15Q8N660 670 aa12.78□□□□□ -0.36
CAPN11-202ENST00000524554 RTF1Q92541 710 aaKnown RBP12.78□□□□□ -0.36
CAPN11-202ENST00000524554 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
CAPN11-202ENST00000524554 MIS18AQ9NYP9 233 aa12.78□□□□□ -0.36
CAPN11-202ENST00000524554 GLTPD2A6NH11 291 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms