RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 U2SURPO15042 1029 aaKnown RBP13□□□□□ -0.33
CNKSR1-209ENST00000524529 USPL1Q5W0Q7 1092 aa13□□□□□ -0.33
CNKSR1-209ENST00000524529 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
CNKSR1-209ENST00000524529 BCL2L12Q9HB09 334 aa13□□□□□ -0.33
CNKSR1-209ENST00000524529 COL15A1P39059 1388 aa12.99□□□□□ -0.33
CNKSR1-209ENST00000524529 GPBP1L1Q9HC44 474 aaPredicted RBP12.99□□□□□ -0.33
CNKSR1-209ENST00000524529 FCHSD2O94868 740 aa12.98□□□□□ -0.33
CNKSR1-209ENST00000524529 CHRNA5P30532 468 aa12.98□□□□□ -0.33
CNKSR1-209ENST00000524529 NFIXQ14938 502 aa12.98□□□□□ -0.33
CNKSR1-209ENST00000524529 VSIG10Q8N0Z9 540 aa12.98□□□□□ -0.33
CNKSR1-209ENST00000524529 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
CNKSR1-209ENST00000524529 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
CNKSR1-209ENST00000524529 DLEC1Q9Y238 1755 aa12.98□□□□□ -0.33
CNKSR1-209ENST00000524529 ANKRD31Q8N7Z5 1873 aa12.97□□□□□ -0.33
CNKSR1-209ENST00000524529 CEMIPQ8WUJ3 1361 aa12.97□□□□□ -0.33
CNKSR1-209ENST00000524529 GNAT3A8MTJ3 354 aa12.97□□□□□ -0.33
CNKSR1-209ENST00000524529 KIF3CO14782 793 aa12.97□□□□□ -0.33
CNKSR1-209ENST00000524529 KCNQ3O43525 872 aa12.97□□□□□ -0.33
CNKSR1-209ENST00000524529 NARFQ9UHQ1 456 aa12.97□□□□□ -0.33
CNKSR1-209ENST00000524529 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
CNKSR1-209ENST00000524529 HEG1Q9ULI3 1381 aa12.96□□□□□ -0.33
CNKSR1-209ENST00000524529 SCN7AQ01118 1682 aa12.96□□□□□ -0.33
CNKSR1-209ENST00000524529 ZPR1O75312 459 aa12.96□□□□□ -0.33
CNKSR1-209ENST00000524529 PPP2R1AP30153 589 aa12.96□□□□□ -0.33
CNKSR1-209ENST00000524529 PRKAR2BP31323 418 aa12.96□□□□□ -0.33
CNKSR1-209ENST00000524529 ZNF790Q6PG37 636 aa12.96□□□□□ -0.33
CNKSR1-209ENST00000524529 ARHGAP27Q6ZUM4 889 aa12.96□□□□□ -0.33
CNKSR1-209ENST00000524529 GAS2L2Q8NHY3 880 aa12.96□□□□□ -0.33
CNKSR1-209ENST00000524529 DLG5Q8TDM6 1919 aa12.96□□□□□ -0.34
CNKSR1-209ENST00000524529 CARMIL3Q8ND23 1372 aa12.95□□□□□ -0.34
CNKSR1-209ENST00000524529 HSPA6P17066 643 aa12.95□□□□□ -0.34
CNKSR1-209ENST00000524529 CANXP27824 592 aaKnown RBP12.95□□□□□ -0.34
CNKSR1-209ENST00000524529 EIF5P55010 431 aaKnown RBP12.95□□□□□ -0.34
CNKSR1-209ENST00000524529 PIM2Q9P1W9 311 aa12.95□□□□□ -0.34
CNKSR1-209ENST00000524529 TEFQ10587 303 aa12.94□□□□□ -0.34
CNKSR1-209ENST00000524529 TTC5Q8N0Z6 440 aa12.94□□□□□ -0.34
CNKSR1-209ENST00000524529 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
CNKSR1-209ENST00000524529 SERPINB2P05120 415 aa12.93□□□□□ -0.34
CNKSR1-209ENST00000524529 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
CNKSR1-209ENST00000524529 ZNF316A6NFI3 1004 aaPredicted RBP12.92□□□□□ -0.34
CNKSR1-209ENST00000524529 STARD3NLO95772 234 aa12.92□□□□□ -0.34
CNKSR1-209ENST00000524529 A1BGP04217 495 aa12.92□□□□□ -0.34
CNKSR1-209ENST00000524529 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
CNKSR1-209ENST00000524529 PRELPP51888 382 aa12.92□□□□□ -0.34
CNKSR1-209ENST00000524529 DALRD3Q5D0E6 543 aaKnown RBP12.92□□□□□ -0.34
CNKSR1-209ENST00000524529 C9orf131Q5VYM1 1079 aa12.92□□□□□ -0.34
CNKSR1-209ENST00000524529 TBC1D9BQ66K14 1250 aa12.92□□□□□ -0.34
CNKSR1-209ENST00000524529 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
CNKSR1-209ENST00000524529 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
CNKSR1-209ENST00000524529 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
CNKSR1-209ENST00000524529 BICDL1Q6ZP65 573 aa12.91□□□□□ -0.34
CNKSR1-209ENST00000524529 MCM10Q7L590 875 aa12.91□□□□□ -0.34
CNKSR1-209ENST00000524529 CFAP53Q96M91 514 aa12.91□□□□□ -0.34
CNKSR1-209ENST00000524529 NMRK2Q9NPI5 230 aa12.91□□□□□ -0.34
CNKSR1-209ENST00000524529 CACNA1SQ13698 1873 aa12.91□□□□□ -0.34
CNKSR1-209ENST00000524529 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
CNKSR1-209ENST00000524529 PIP4K2AP48426 406 aaPredicted RBP12.9□□□□□ -0.34
CNKSR1-209ENST00000524529 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.34
CNKSR1-209ENST00000524529 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
CNKSR1-209ENST00000524529 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
CNKSR1-209ENST00000524529 CAMTA2O94983 1202 aa12.89□□□□□ -0.35
CNKSR1-209ENST00000524529 IL6STP40189 918 aaPredicted RBP12.89□□□□□ -0.35
CNKSR1-209ENST00000524529 RASSF7Q02833 373 aa12.89□□□□□ -0.35
CNKSR1-209ENST00000524529 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
CNKSR1-209ENST00000524529 TEX13AQ9BXU3 409 aaPredicted RBP12.89□□□□□ -0.35
CNKSR1-209ENST00000524529 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
CNKSR1-209ENST00000524529 FER1L6Q2WGJ9 1857 aa12.89□□□□□ -0.35
CNKSR1-209ENST00000524529 RNF181Q9P0P0 153 aa12.88□□□□□ -0.35
CNKSR1-209ENST00000524529 ZNF330Q9Y3S2 320 aaPredicted RBP12.88□□□□□ -0.35
CNKSR1-209ENST00000524529 DICER1Q9UPY3 1922 aaKnown RBP12.88□□□□□ -0.35
CNKSR1-209ENST00000524529 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
CNKSR1-209ENST00000524529 KDM3BQ7LBC6 1761 aa12.87□□□□□ -0.35
CNKSR1-209ENST00000524529 A0A087WZG4 1122 aa12.87□□□□□ -0.35
CNKSR1-209ENST00000524529 PRR5LQ6MZQ0 368 aa12.87□□□□□ -0.35
CNKSR1-209ENST00000524529 C2CD5Q86YS7 1000 aa12.87□□□□□ -0.35
CNKSR1-209ENST00000524529 TIAM2Q8IVF5 1701 aa12.87□□□□□ -0.35
CNKSR1-209ENST00000524529 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
CNKSR1-209ENST00000524529 WDR90Q96KV7 1748 aa12.86□□□□□ -0.35
CNKSR1-209ENST00000524529 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
CNKSR1-209ENST00000524529 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
CNKSR1-209ENST00000524529 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
CNKSR1-209ENST00000524529 NFKBIEO00221 500 aa12.85□□□□□ -0.35
CNKSR1-209ENST00000524529 TOMM70O94826 608 aa12.85□□□□□ -0.35
CNKSR1-209ENST00000524529 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
CNKSR1-209ENST00000524529 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
CNKSR1-209ENST00000524529 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
CNKSR1-209ENST00000524529 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
CNKSR1-209ENST00000524529 TTLL6Q8N841 843 aa12.85□□□□□ -0.35
CNKSR1-209ENST00000524529 PLEKHF1Q96S99 279 aa12.85□□□□□ -0.35
CNKSR1-209ENST00000524529 MIS18AQ9NYP9 233 aa12.85□□□□□ -0.35
CNKSR1-209ENST00000524529 H0YIN7 160 aa12.84□□□□□ -0.35
CNKSR1-209ENST00000524529 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
CNKSR1-209ENST00000524529 RTF1Q92541 710 aaKnown RBP12.84□□□□□ -0.35
CNKSR1-209ENST00000524529 NUP98P52948 1817 aa12.83□□□□□ -0.35
CNKSR1-209ENST00000524529 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
CNKSR1-209ENST00000524529 DNAJC5GQ8N7S2 189 aa12.83□□□□□ -0.36
CNKSR1-209ENST00000524529 BRIP1Q9BX63 1249 aa12.83□□□□□ -0.36
CNKSR1-209ENST00000524529 RRAGCQ9HB90 399 aa12.83□□□□□ -0.36
CNKSR1-209ENST00000524529 LMNB1P20700 586 aa12.82□□□□□ -0.36
CNKSR1-209ENST00000524529 APLP1P51693 650 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms