RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 HOXC9P31274 260 aa11.68□□□□□ -0.54
PUM1-213ENST00000524516 EPHX2P34913 555 aa11.68□□□□□ -0.54
PUM1-213ENST00000524516 BRPF1P55201 1214 aaPredicted RBP11.68□□□□□ -0.54
PUM1-213ENST00000524516 PNMA8AQ86V59 439 aaPredicted RBP11.68□□□□□ -0.54
PUM1-213ENST00000524516 SRP68Q9UHB9 627 aaKnown RBP11.68□□□□□ -0.54
PUM1-213ENST00000524516 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
PUM1-213ENST00000524516 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
PUM1-213ENST00000524516 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
PUM1-213ENST00000524516 CNTNAP4Q9C0A0 1308 aa11.66□□□□□ -0.54
PUM1-213ENST00000524516 USP42Q9H9J4 1324 aaKnown RBP11.66□□□□□ -0.54
PUM1-213ENST00000524516 ADAMTS7Q9UKP4 1686 aa11.66□□□□□ -0.54
PUM1-213ENST00000524516 H0YIN7 160 aa11.66□□□□□ -0.54
PUM1-213ENST00000524516 RC3H1Q5TC82 1133 aaKnown RBP11.66□□□□□ -0.54
PUM1-213ENST00000524516 C2CD5Q86YS7 1000 aa11.66□□□□□ -0.54
PUM1-213ENST00000524516 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
PUM1-213ENST00000524516 COL5A3P25940 1745 aaPredicted RBP11.66□□□□□ -0.54
PUM1-213ENST00000524516 MAP3K19Q56UN5 1328 aa11.65□□□□□ -0.54
PUM1-213ENST00000524516 C21orf2O43822 256 aa11.65□□□□□ -0.54
PUM1-213ENST00000524516 CIAPIN1Q6FI81 312 aa11.65□□□□□ -0.54
PUM1-213ENST00000524516 TLL2Q9Y6L7 1015 aa11.65□□□□□ -0.54
PUM1-213ENST00000524516 FER1L6Q2WGJ9 1857 aa11.65□□□□□ -0.54
PUM1-213ENST00000524516 KDRP35968 1356 aa11.65□□□□□ -0.55
PUM1-213ENST00000524516 SBNO2Q9Y2G9 1366 aa11.65□□□□□ -0.55
PUM1-213ENST00000524516 RNF123Q5XPI4 1314 aa11.63□□□□□ -0.55
PUM1-213ENST00000524516 LTBP3Q9NS15 1303 aa11.63□□□□□ -0.55
PUM1-213ENST00000524516 FMR1Q06787 632 aaKnown RBP eCLIP11.63□□□□□ -0.55
PUM1-213ENST00000524516 ZNF622Q969S3 477 aaKnown RBP eCLIP11.63□□□□□ -0.555e-10■■□□□ 12.6
PUM1-213ENST00000524516 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
PUM1-213ENST00000524516 AFDNP55196 1824 aaKnown RBP11.62□□□□□ -0.55
PUM1-213ENST00000524516 ZNF831Q5JPB2 1677 aa11.62□□□□□ -0.55
PUM1-213ENST00000524516 TRPM7Q96QT4 1865 aa11.61□□□□□ -0.55
PUM1-213ENST00000524516 EDC4Q6P2E9 1401 aaKnown RBP11.61□□□□□ -0.55
PUM1-213ENST00000524516 ZPR1O75312 459 aa11.61□□□□□ -0.55
PUM1-213ENST00000524516 TM4SF1P30408 202 aa11.61□□□□□ -0.55
PUM1-213ENST00000524516 HDGFL2Q7Z4V5 671 aaPredicted RBP11.61□□□□□ -0.55
PUM1-213ENST00000524516 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
PUM1-213ENST00000524516 RTL1A6NKG5 1358 aa11.6□□□□□ -0.55
PUM1-213ENST00000524516 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
PUM1-213ENST00000524516 BICDL1Q6ZP65 573 aa11.6□□□□□ -0.55
PUM1-213ENST00000524516 CTU1Q7Z7A3 348 aaKnown RBP11.6□□□□□ -0.55
PUM1-213ENST00000524516 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
PUM1-213ENST00000524516 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
PUM1-213ENST00000524516 PITPNM2Q9BZ72 1349 aa11.6□□□□□ -0.55
PUM1-213ENST00000524516 TRAF5O00463 557 aa11.59□□□□□ -0.55
PUM1-213ENST00000524516 CST9Q5W186 159 aa11.59□□□□□ -0.55
PUM1-213ENST00000524516 SPG7Q9UQ90 795 aa11.59□□□□□ -0.55
PUM1-213ENST00000524516 NRXN2Q9P2S2 1712 aa11.59□□□□□ -0.55
PUM1-213ENST00000524516 CARMIL3Q8ND23 1372 aa11.58□□□□□ -0.56
PUM1-213ENST00000524516 MYH14Q7Z406 1995 aaKnown RBP11.58□□□□□ -0.56
PUM1-213ENST00000524516 SERPINB2P05120 415 aa11.58□□□□□ -0.56
PUM1-213ENST00000524516 CRKLP46109 303 aaKnown RBP11.58□□□□□ -0.56
PUM1-213ENST00000524516 USPL1Q5W0Q7 1092 aa11.58□□□□□ -0.56
PUM1-213ENST00000524516 SAPCD2Q86UD0 394 aa11.58□□□□□ -0.56
PUM1-213ENST00000524516 TMC1Q8TDI8 760 aa11.58□□□□□ -0.56
PUM1-213ENST00000524516 COG3Q96JB2 828 aa11.58□□□□□ -0.56
PUM1-213ENST00000524516 FBLN1P23142 703 aa11.57□□□□□ -0.56
PUM1-213ENST00000524516 NOGQ13253 232 aa11.57□□□□□ -0.56
PUM1-213ENST00000524516 NFIXQ14938 502 aa11.57□□□□□ -0.56
PUM1-213ENST00000524516 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
PUM1-213ENST00000524516 CELF2O95319 508 aaKnown RBP11.56□□□□□ -0.56
PUM1-213ENST00000524516 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
PUM1-213ENST00000524516 CACNA1SQ13698 1873 aa11.56□□□□□ -0.56
PUM1-213ENST00000524516 SOGA3Q5TF21 947 aa11.56□□□□□ -0.56
PUM1-213ENST00000524516 HHIPL1Q96JK4 782 aa11.56□□□□□ -0.56
PUM1-213ENST00000524516 RRS1Q15050 365 aaKnown RBP11.55□□□□□ -0.56
PUM1-213ENST00000524516 SAGE1Q9NXZ1 904 aa11.55□□□□□ -0.56
PUM1-213ENST00000524516 COL11A2P13942 1736 aaPredicted RBP11.55□□□□□ -0.56
PUM1-213ENST00000524516 PDE6BP35913 854 aa11.54□□□□□ -0.56
PUM1-213ENST00000524516 ZNF408Q9H9D4 720 aa11.54□□□□□ -0.56
PUM1-213ENST00000524516 COLQQ9Y215 455 aaPredicted RBP11.54□□□□□ -0.56
PUM1-213ENST00000524516 INSRP06213 1382 aa11.54□□□□□ -0.56
PUM1-213ENST00000524516 PTCD1O75127 700 aaKnown RBP11.53□□□□□ -0.56
PUM1-213ENST00000524516 TRPA1O75762 1119 aa11.53□□□□□ -0.56
PUM1-213ENST00000524516 PRPF40BQ6NWY9 871 aaKnown RBP11.53□□□□□ -0.56
PUM1-213ENST00000524516 IFNL2Q8IZJ0 200 aa11.53□□□□□ -0.56
PUM1-213ENST00000524516 GPC2Q8N158 579 aa11.53□□□□□ -0.56
PUM1-213ENST00000524516 ZIC5Q96T25 663 aa11.53□□□□□ -0.56
PUM1-213ENST00000524516 ZNF277Q9NRM2 450 aaPredicted RBP11.53□□□□□ -0.56
PUM1-213ENST00000524516 TERF2IPQ9NYB0 399 aa11.53□□□□□ -0.56
PUM1-213ENST00000524516 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
PUM1-213ENST00000524516 A0A1W2PP64 1363 aa11.53□□□□□ -0.56
PUM1-213ENST00000524516 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
PUM1-213ENST00000524516 PKN2Q16513 984 aaKnown RBP11.52□□□□□ -0.57
PUM1-213ENST00000524516 CNKSR1Q969H4 720 aa11.52□□□□□ -0.57
PUM1-213ENST00000524516 GJA3Q9Y6H8 435 aa11.52□□□□□ -0.57
PUM1-213ENST00000524516 PHKG2P15735 406 aa11.51□□□□□ -0.57
PUM1-213ENST00000524516 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
PUM1-213ENST00000524516 HDAC9Q9UKV0 1011 aa11.51□□□□□ -0.57
PUM1-213ENST00000524516 ANKRD31Q8N7Z5 1873 aa11.51□□□□□ -0.57
PUM1-213ENST00000524516 SCN11AQ9UI33 1791 aa11.5□□□□□ -0.57
PUM1-213ENST00000524516 NPHP1O15259 732 aa11.5□□□□□ -0.57
PUM1-213ENST00000524516 HSP90AB2PQ58FF8 381 aa11.5□□□□□ -0.57
PUM1-213ENST00000524516 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
PUM1-213ENST00000524516 SLC12A5Q9H2X9 1139 aa11.5□□□□□ -0.57
PUM1-213ENST00000524516 RNF186Q9NXI6 227 aa11.5□□□□□ -0.57
PUM1-213ENST00000524516 SLX4Q8IY92 1834 aa11.5□□□□□ -0.57
PUM1-213ENST00000524516 FKBP4Q02790 459 aaKnown RBP eCLIP11.49□□□□□ -0.57
PUM1-213ENST00000524516 USP50Q70EL3 339 aaPredicted RBP11.49□□□□□ -0.57
PUM1-213ENST00000524516 CCDC24Q8N4L8 307 aa11.49□□□□□ -0.57
PUM1-213ENST00000524516 BRIP1Q9BX63 1249 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms