RNA–Protein interactions for RNA: ENST00000524500.5

CTSB-206, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-206ENST00000524500 COL15A1P39059 1388 aa25.01■■□□□ 1.59
CTSB-206ENST00000524500 CANXP27824 592 aaKnown RBP25■■□□□ 1.59
CTSB-206ENST00000524500 USPL1Q5W0Q7 1092 aa25■■□□□ 1.59
CTSB-206ENST00000524500 SIPA1L3O60292 1781 aaPredicted RBP25■■□□□ 1.59
CTSB-206ENST00000524500 ZEB1P37275 1124 aaPredicted RBP24.99■■□□□ 1.59
CTSB-206ENST00000524500 TGFB2P61812 414 aa24.99■■□□□ 1.59
CTSB-206ENST00000524500 NARFQ9UHQ1 456 aa24.99■■□□□ 1.59
CTSB-206ENST00000524500 MAPK8IP3Q9UPT6 1336 aa24.99■■□□□ 1.59
CTSB-206ENST00000524500 CHD4Q14839 1912 aa24.98■■□□□ 1.59
CTSB-206ENST00000524500 MYBBP1AQ9BQG0 1328 aaKnown RBP24.98■■□□□ 1.59
CTSB-206ENST00000524500 A0A087WZG4 1122 aa24.98■■□□□ 1.59
CTSB-206ENST00000524500 DCTN1Q14203 1278 aa24.98■■□□□ 1.59
CTSB-206ENST00000524500 PLEKHF1Q96S99 279 aa24.98■■□□□ 1.59
CTSB-206ENST00000524500 KCNQ3O43525 872 aa24.97■■□□□ 1.59
CTSB-206ENST00000524500 NPM2Q86SE8 214 aaKnown RBP24.97■■□□□ 1.59
CTSB-206ENST00000524500 C10orf71Q711Q0 1435 aa24.96■■□□□ 1.59
CTSB-206ENST00000524500 EIF5P55010 431 aaKnown RBP24.95■■□□□ 1.58
CTSB-206ENST00000524500 TAF7Q15545 349 aaPredicted RBP24.95■■□□□ 1.58
CTSB-206ENST00000524500 NFE2L2Q16236 605 aa24.95■■□□□ 1.58
CTSB-206ENST00000524500 ZNF784Q8NCA9 323 aaPredicted RBP24.95■■□□□ 1.58
CTSB-206ENST00000524500 WWC3Q9ULE0 1092 aa24.95■■□□□ 1.58
CTSB-206ENST00000524500 TM4SF1P30408 202 aa24.94■■□□□ 1.58
CTSB-206ENST00000524500 SNRPA1P09661 255 aaKnown RBP24.93■■□□□ 1.58
CTSB-206ENST00000524500 DDR1Q08345 913 aa24.93■■□□□ 1.58
CTSB-206ENST00000524500 ZNF330Q9Y3S2 320 aaPredicted RBP24.93■■□□□ 1.58
CTSB-206ENST00000524500 PXDNLA1KZ92 1463 aa24.93■■□□□ 1.58
CTSB-206ENST00000524500 A0A0G2JLW4 131 aa24.92■■□□□ 1.58
CTSB-206ENST00000524500 POLRMTO00411 1230 aaKnown RBP24.92■■□□□ 1.58
CTSB-206ENST00000524500 IL6STP40189 918 aaPredicted RBP24.92■■□□□ 1.58
CTSB-206ENST00000524500 PNISRQ8TF01 805 aaKnown RBP24.92■■□□□ 1.58
CTSB-206ENST00000524500 A1BGP04217 495 aa24.91■■□□□ 1.58
CTSB-206ENST00000524500 KIF13BQ9NQT8 1826 aa24.91■■□□□ 1.58
CTSB-206ENST00000524500 NFIXQ14938 502 aa24.9■■□□□ 1.58
CTSB-206ENST00000524500 DPEP1P16444 411 aa24.89■■□□□ 1.58
CTSB-206ENST00000524500 USP16Q9Y5T5 823 aa24.89■■□□□ 1.58
CTSB-206ENST00000524500 BCL2L12Q9HB09 334 aa24.88■■□□□ 1.57
CTSB-206ENST00000524500 BCS1LQ9Y276 419 aa24.88■■□□□ 1.57
CTSB-206ENST00000524500 MIS18AQ9NYP9 233 aa24.87■■□□□ 1.57
CTSB-206ENST00000524500 TBC1D2BQ9UPU7 963 aa24.87■■□□□ 1.57
CTSB-206ENST00000524500 WDR43Q15061 677 aaKnown RBP eCLIP24.86■■□□□ 1.57
CTSB-206ENST00000524500 PRAMEF22A3QJZ6 481 aa24.85■■□□□ 1.57
CTSB-206ENST00000524500 SERPINB2P05120 415 aa24.85■■□□□ 1.57
CTSB-206ENST00000524500 PRKRIP1Q9H875 184 aaPredicted RBP24.85■■□□□ 1.57
CTSB-206ENST00000524500 RIPK4P57078 832 aa24.84■■□□□ 1.57
CTSB-206ENST00000524500 BICDL1Q6ZP65 573 aa24.84■■□□□ 1.57
CTSB-206ENST00000524500 THUMPD2Q9BTF0 503 aaKnown RBP24.84■■□□□ 1.57
CTSB-206ENST00000524500 PIM2Q9P1W9 311 aa24.84■■□□□ 1.57
CTSB-206ENST00000524500 N4BP2Q86UW6 1770 aaPredicted RBP24.83■■□□□ 1.57
CTSB-206ENST00000524500 DLG5Q8TDM6 1919 aa24.83■■□□□ 1.57
CTSB-206ENST00000524500 LMOD3Q0VAK6 560 aa24.83■■□□□ 1.57
CTSB-206ENST00000524500 KIAA1551Q9HCM1 1747 aa24.83■■□□□ 1.57
CTSB-206ENST00000524500 KCNA3P22001 575 aa24.82■■□□□ 1.56
CTSB-206ENST00000524500 DZIP3Q86Y13 1208 aaKnown RBP24.82■■□□□ 1.56
CTSB-206ENST00000524500 TMPOP42166 694 aaKnown RBP24.81■■□□□ 1.56
CTSB-206ENST00000524500 PIP4K2AP48426 406 aaPredicted RBP24.81■■□□□ 1.56
CTSB-206ENST00000524500 TBC1D9BQ66K14 1250 aa24.81■■□□□ 1.56
CTSB-206ENST00000524500 CAMTA2O94983 1202 aa24.8■■□□□ 1.56
CTSB-206ENST00000524500 DALRD3Q5D0E6 543 aaKnown RBP24.8■■□□□ 1.56
CTSB-206ENST00000524500 CHRNA5P30532 468 aa24.79■■□□□ 1.56
CTSB-206ENST00000524500 CCDC146Q8IYE0 955 aa24.79■■□□□ 1.56
CTSB-206ENST00000524500 RUNDC1Q96C34 613 aa24.79■■□□□ 1.56
CTSB-206ENST00000524500 SETDB2Q96T68 719 aa24.79■■□□□ 1.56
CTSB-206ENST00000524500 GIGYF1O75420 1035 aaPredicted RBP24.78■■□□□ 1.56
CTSB-206ENST00000524500 EIF4A1P60842 406 aaKnown RBP24.78■■□□□ 1.56
CTSB-206ENST00000524500 ARHGAP27Q6ZUM4 889 aa24.78■■□□□ 1.56
CTSB-206ENST00000524500 TSPYL4Q9UJ04 414 aa24.78■■□□□ 1.56
CTSB-206ENST00000524500 ZNF652Q9Y2D9 606 aa24.78■■□□□ 1.56
CTSB-206ENST00000524500 SCN7AQ01118 1682 aa24.78■■□□□ 1.56
CTSB-206ENST00000524500 CARMIL3Q8ND23 1372 aa24.78■■□□□ 1.56
CTSB-206ENST00000524500 CLEC4GQ6UXB4 293 aa24.77■■□□□ 1.56
CTSB-206ENST00000524500 NBPF26B4DH59 902 aa24.76■■□□□ 1.55
CTSB-206ENST00000524500 NPHP1O15259 732 aa24.76■■□□□ 1.55
CTSB-206ENST00000524500 NEUROD2Q15784 382 aa24.76■■□□□ 1.55
CTSB-206ENST00000524500 NBPF10Q6P3W6 841 aaKnown RBP24.76■■□□□ 1.55
CTSB-206ENST00000524500 NBPF15Q8N660 670 aa24.76■■□□□ 1.55
CTSB-206ENST00000524500 BABAM1Q9NWV8 329 aa24.76■■□□□ 1.55
CTSB-206ENST00000524500 ADAMTS8Q9UP79 889 aa24.76■■□□□ 1.55
CTSB-206ENST00000524500 NRXN2Q9P2S2 1712 aa24.75■■□□□ 1.55
CTSB-206ENST00000524500 KDM3BQ7LBC6 1761 aa24.75■■□□□ 1.55
CTSB-206ENST00000524500 RRP7AQ9Y3A4 280 aaKnown RBP24.75■■□□□ 1.55
CTSB-206ENST00000524500 H0YIN7 160 aa24.74■■□□□ 1.55
CTSB-206ENST00000524500 PDZRN3Q9UPQ7 1066 aa24.74■■□□□ 1.55
CTSB-206ENST00000524500 ATP10DQ9P241 1426 aa24.74■■□□□ 1.55
CTSB-206ENST00000524500 AFDNP55196 1824 aaKnown RBP24.74■■□□□ 1.55
CTSB-206ENST00000524500 RGL2O15211 777 aa24.73■■□□□ 1.55
CTSB-206ENST00000524500 C2CD5Q86YS7 1000 aa24.73■■□□□ 1.55
CTSB-206ENST00000524500 BRCA1P38398 1863 aaKnown RBP24.72■■□□□ 1.55
CTSB-206ENST00000524500 ADCY9O60503 1353 aa24.72■■□□□ 1.55
CTSB-206ENST00000524500 PDE6BP35913 854 aa24.72■■□□□ 1.55
CTSB-206ENST00000524500 CNBD1Q8NA66 436 aa24.72■■□□□ 1.55
CTSB-206ENST00000524500 BRIP1Q9BX63 1249 aa24.72■■□□□ 1.55
CTSB-206ENST00000524500 ST5P78524 1137 aa24.71■■□□□ 1.55
CTSB-206ENST00000524500 PRR5LQ6MZQ0 368 aa24.71■■□□□ 1.55
CTSB-206ENST00000524500 GPBP1L1Q9HC44 474 aaPredicted RBP24.71■■□□□ 1.55
CTSB-206ENST00000524500 LAMB4A4D0S4 1761 aa24.7■■□□□ 1.55
CTSB-206ENST00000524500 TTLL6Q8N841 843 aa24.7■■□□□ 1.54
CTSB-206ENST00000524500 NGEFQ8N5V2 710 aa24.69■■□□□ 1.54
CTSB-206ENST00000524500 BCORQ6W2J9 1755 aa24.69■■□□□ 1.54
CTSB-206ENST00000524500 ZNF316A6NFI3 1004 aaPredicted RBP24.68■■□□□ 1.54
CTSB-206ENST00000524500 NBPF5PQ86XG9 351 aaPredicted RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms