RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 IFNL2Q8IZJ0 200 aa9.22□□□□□ -0.93
VPS11-201ENST00000524454 STK32BQ9NY57 414 aa9.22□□□□□ -0.93
VPS11-201ENST00000524454 TRIM35Q9UPQ4 493 aa9.22□□□□□ -0.93
VPS11-201ENST00000524454 KDM6AO15550 1401 aaPredicted RBP9.22□□□□□ -0.93
VPS11-201ENST00000524454 FCHSD2O94868 740 aa9.21□□□□□ -0.94
VPS11-201ENST00000524454 ZBTB7AO95365 584 aa9.21□□□□□ -0.94
VPS11-201ENST00000524454 SLC15A2Q16348 729 aa9.21□□□□□ -0.94
VPS11-201ENST00000524454 PLEKHO1Q53GL0 409 aaPredicted RBP9.21□□□□□ -0.94
VPS11-201ENST00000524454 HS6ST3Q8IZP7 471 aa9.21□□□□□ -0.94
VPS11-201ENST00000524454 PIGBQ92521 554 aa9.21□□□□□ -0.94
VPS11-201ENST00000524454 PPP4R2Q9NY27 417 aa9.21□□□□□ -0.94
VPS11-201ENST00000524454 CCNL1Q9UK58 526 aaPredicted RBP9.21□□□□□ -0.94
VPS11-201ENST00000524454 RCAN3Q9UKA8 241 aa9.21□□□□□ -0.94
VPS11-201ENST00000524454 IL16Q14005 1332 aa9.21□□□□□ -0.94
VPS11-201ENST00000524454 KDRP35968 1356 aa9.21□□□□□ -0.94
VPS11-201ENST00000524454 PALLDQ8WX93 1383 aa9.21□□□□□ -0.94
VPS11-201ENST00000524454 QSER1Q2KHR3 1735 aa9.2□□□□□ -0.94
VPS11-201ENST00000524454 STK25O00506 426 aa9.2□□□□□ -0.94
VPS11-201ENST00000524454 CT47B1P0C2W7 299 aaPredicted RBP9.2□□□□□ -0.94
VPS11-201ENST00000524454 SLFN5Q08AF3 891 aa9.2□□□□□ -0.94
VPS11-201ENST00000524454 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
VPS11-201ENST00000524454 DUSP27Q5VZP5 1158 aa9.2□□□□□ -0.94
VPS11-201ENST00000524454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.94
VPS11-201ENST00000524454 TMOD3Q9NYL9 352 aa9.2□□□□□ -0.94
VPS11-201ENST00000524454 C4BP0C0L5 1744 aa9.19□□□□□ -0.94
VPS11-201ENST00000524454 RRP1P56182 461 aaKnown RBP9.19□□□□□ -0.94
VPS11-201ENST00000524454 SMIM5Q71RC9 77 aa9.19□□□□□ -0.94
VPS11-201ENST00000524454 TAOK2Q9UL54 1235 aa9.19□□□□□ -0.94
VPS11-201ENST00000524454 ASAP1Q9ULH1 1129 aa9.19□□□□□ -0.94
VPS11-201ENST00000524454 APAF1O14727 1248 aa9.18□□□□□ -0.94
VPS11-201ENST00000524454 MTHFSDQ2M296 383 aaKnown RBP9.18□□□□□ -0.94
VPS11-201ENST00000524454 AMOTQ4VCS5 1084 aa9.18□□□□□ -0.94
VPS11-201ENST00000524454 C1orf141Q5JVX7 400 aa9.18□□□□□ -0.94
VPS11-201ENST00000524454 SLC27A3Q5K4L6 730 aa9.18□□□□□ -0.94
VPS11-201ENST00000524454 WWC1Q8IX03 1113 aa9.18□□□□□ -0.94
VPS11-201ENST00000524454 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.18□□□□□ -0.94
VPS11-201ENST00000524454 PLEKHF1Q96S99 279 aa9.18□□□□□ -0.94
VPS11-201ENST00000524454 STK24Q9Y6E0 443 aa9.18□□□□□ -0.94
VPS11-201ENST00000524454 UBR3Q6ZT12 1888 aa9.17□□□□□ -0.94
VPS11-201ENST00000524454 COL5A3P25940 1745 aaPredicted RBP9.17□□□□□ -0.94
VPS11-201ENST00000524454 TJP1Q07157 1748 aa9.17□□□□□ -0.94
VPS11-201ENST00000524454 PNPLA7Q6ZV29 1317 aa9.17□□□□□ -0.94
VPS11-201ENST00000524454 MAPK8IP3Q9UPT6 1336 aa9.17□□□□□ -0.94
VPS11-201ENST00000524454 U2AF1L5P0DN76 240 aaPredicted RBP9.17□□□□□ -0.94
VPS11-201ENST00000524454 CABP4P57796 275 aa9.17□□□□□ -0.94
VPS11-201ENST00000524454 U2AF1Q01081 240 aaKnown RBP eCLIP9.17□□□□□ -0.94
VPS11-201ENST00000524454 DCAF5Q96JK2 942 aa9.17□□□□□ -0.94
VPS11-201ENST00000524454 MYH16Q9H6N6 1097 aa9.17□□□□□ -0.94
VPS11-201ENST00000524454 LGR6Q9HBX8 967 aa9.17□□□□□ -0.94
VPS11-201ENST00000524454 ATG3Q9NT62 314 aa9.17□□□□□ -0.94
VPS11-201ENST00000524454 TFCP2L1Q9NZI6 479 aa9.17□□□□□ -0.94
VPS11-201ENST00000524454 ADAMTS7Q9UKP4 1686 aa9.16□□□□□ -0.94
VPS11-201ENST00000524454 DLG5Q8TDM6 1919 aa9.16□□□□□ -0.94
VPS11-201ENST00000524454 NEFMP07197 916 aa9.16□□□□□ -0.94
VPS11-201ENST00000524454 PRKAR2BP31323 418 aa9.16□□□□□ -0.94
VPS11-201ENST00000524454 CALD1Q05682 793 aaKnown RBP9.16□□□□□ -0.94
VPS11-201ENST00000524454 ITPK1Q13572 414 aa9.16□□□□□ -0.94
VPS11-201ENST00000524454 AAMPQ13685 434 aa9.16□□□□□ -0.94
VPS11-201ENST00000524454 AMIGO3Q86WK7 504 aa9.16□□□□□ -0.94
VPS11-201ENST00000524454 LINC00116Q8NCU8 138 aa9.16□□□□□ -0.94
VPS11-201ENST00000524454 SPON1Q9HCB6 807 aa9.16□□□□□ -0.94
VPS11-201ENST00000524454 SIPA1L3O60292 1781 aaPredicted RBP9.16□□□□□ -0.94
VPS11-201ENST00000524454 PLEKHG2Q9H7P9 1386 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 LOC102724428A0A0B4J2F2 783 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 ERVV-2B6SEH9 535 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 PHF14O94880 888 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 HSP90AB1P08238 724 aaKnown RBP9.15□□□□□ -0.94
VPS11-201ENST00000524454 SIK1P57059 783 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 LMOD3Q0VAK6 560 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 AKAP4Q5JQC9 854 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 EFCAB3Q8N7B9 438 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 NFATC2IPQ8NCF5 419 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 SMARCC1Q92922 1105 aaPredicted RBP9.15□□□□□ -0.94
VPS11-201ENST00000524454 ZNF428Q96B54 188 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 PHACTR3Q96KR7 559 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 SLC4A9Q96Q91 983 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 RSPH6AQ9H0K4 717 aa9.15□□□□□ -0.94
VPS11-201ENST00000524454 PPP1R1BQ9UD71 204 aaPredicted RBP9.15□□□□□ -0.94
VPS11-201ENST00000524454 SRCAPQ6ZRS2 3230 aa9.14□□□□□ -0.95
VPS11-201ENST00000524454 POTEFA5A3E0 1075 aa9.14□□□□□ -0.95
VPS11-201ENST00000524454 RNMTO43148 476 aaKnown RBP9.14□□□□□ -0.95
VPS11-201ENST00000524454 PTCD1O75127 700 aaKnown RBP9.14□□□□□ -0.95
VPS11-201ENST00000524454 ATP6V1AP38606 617 aa9.14□□□□□ -0.95
VPS11-201ENST00000524454 PTGER2P43116 358 aa9.14□□□□□ -0.95
VPS11-201ENST00000524454 MSL1Q68DK7 614 aa9.14□□□□□ -0.95
VPS11-201ENST00000524454 COL23A1Q86Y22 540 aaPredicted RBP9.14□□□□□ -0.95
VPS11-201ENST00000524454 CCDC146Q8IYE0 955 aa9.14□□□□□ -0.95
VPS11-201ENST00000524454 CDCA7LQ96GN5 454 aa9.14□□□□□ -0.95
VPS11-201ENST00000524454 MRC1P22897 1456 aa9.14□□□□□ -0.95
VPS11-201ENST00000524454 COL24A1Q17RW2 1714 aa9.14□□□□□ -0.95
VPS11-201ENST00000524454 MAP3K5Q99683 1374 aa9.13□□□□□ -0.95
VPS11-201ENST00000524454 TMPOP42166 694 aaKnown RBP9.13□□□□□ -0.95
VPS11-201ENST00000524454 SLC39A6Q13433 755 aa9.13□□□□□ -0.95
VPS11-201ENST00000524454 SLC39A7Q92504 469 aa9.13□□□□□ -0.95
VPS11-201ENST00000524454 AK7Q96M32 723 aa9.13□□□□□ -0.95
VPS11-201ENST00000524454 MTFR1LQ9H019 292 aa9.13□□□□□ -0.95
VPS11-201ENST00000524454 METRNQ9UJH8 293 aa9.13□□□□□ -0.95
VPS11-201ENST00000524454 UBR2Q8IWV8 1755 aa9.13□□□□□ -0.95
VPS11-201ENST00000524454 MYH14Q7Z406 1995 aaKnown RBP9.13□□□□□ -0.95
VPS11-201ENST00000524454 C4AP0C0L4 1744 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms