RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 IL13P35225 146 aa10.62□□□□□ -0.71
NECTIN1-204ENST00000524429 FOXK1P85037 733 aa10.62□□□□□ -0.71
NECTIN1-204ENST00000524429 NPM2Q86SE8 214 aaKnown RBP10.62□□□□□ -0.71
NECTIN1-204ENST00000524429 GPBP1L1Q9HC44 474 aaPredicted RBP10.62□□□□□ -0.71
NECTIN1-204ENST00000524429 FBLN1P23142 703 aa10.61□□□□□ -0.71
NECTIN1-204ENST00000524429 AMPHP49418 695 aa10.61□□□□□ -0.71
NECTIN1-204ENST00000524429 GPIHBP1Q8IV16 184 aa10.61□□□□□ -0.71
NECTIN1-204ENST00000524429 PLPP6Q8IY26 295 aa10.61□□□□□ -0.71
NECTIN1-204ENST00000524429 NGEFQ8N5V2 710 aa10.61□□□□□ -0.71
NECTIN1-204ENST00000524429 LARP6Q9BRS8 491 aaKnown RBP10.61□□□□□ -0.71
NECTIN1-204ENST00000524429 KDM4CQ9H3R0 1056 aa10.61□□□□□ -0.71
NECTIN1-204ENST00000524429 PKD1L3Q7Z443 1732 aa10.61□□□□□ -0.71
NECTIN1-204ENST00000524429 SF3B2Q13435 895 aaKnown RBP10.6□□□□□ -0.71
NECTIN1-204ENST00000524429 FAM9BQ8IZU0 186 aa10.6□□□□□ -0.71
NECTIN1-204ENST00000524429 PNNQ9H307 717 aaKnown RBP10.6□□□□□ -0.71
NECTIN1-204ENST00000524429 ADAMTS8Q9UP79 889 aa10.6□□□□□ -0.71
NECTIN1-204ENST00000524429 KIAA0232Q92628 1395 aa10.6□□□□□ -0.71
NECTIN1-204ENST00000524429 COL5A2P05997 1499 aaPredicted RBP10.6□□□□□ -0.71
NECTIN1-204ENST00000524429 GLI3P10071 1580 aa10.6□□□□□ -0.71
NECTIN1-204ENST00000524429 IGSF1Q8N6C5 1336 aa10.59□□□□□ -0.71
NECTIN1-204ENST00000524429 PPM1GO15355 546 aaPredicted RBP10.59□□□□□ -0.71
NECTIN1-204ENST00000524429 FCHSD2O94868 740 aa10.59□□□□□ -0.71
NECTIN1-204ENST00000524429 EIF4A2Q14240 407 aaKnown RBP10.59□□□□□ -0.71
NECTIN1-204ENST00000524429 HSP90AB2PQ58FF8 381 aa10.59□□□□□ -0.71
NECTIN1-204ENST00000524429 GPHNQ9NQX3 736 aaPredicted RBP10.59□□□□□ -0.71
NECTIN1-204ENST00000524429 ZBED9Q6R2W3 1325 aa10.58□□□□□ -0.72
NECTIN1-204ENST00000524429 BRWD3Q6RI45 1802 aa10.57□□□□□ -0.72
NECTIN1-204ENST00000524429 YY1P25490 414 aa10.57□□□□□ -0.72
NECTIN1-204ENST00000524429 PTPN5P54829 565 aa10.57□□□□□ -0.72
NECTIN1-204ENST00000524429 CABLES1Q8TDN4 633 aa10.57□□□□□ -0.72
NECTIN1-204ENST00000524429 SHANK3Q9BYB0 1731 aa10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 U2AF1L5P0DN76 240 aaPredicted RBP10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 U2AF1Q01081 240 aaKnown RBP eCLIP10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 MFSD10Q14728 455 aa10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 UNC5CLQ8IV45 518 aa10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 SEPT12Q8IYM1 358 aa10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 RUNDC1Q96C34 613 aa10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 PLEKHF1Q96S99 279 aa10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 ARID3AQ99856 593 aa10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 SLIT2O94813 1529 aa10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 ADAMTS7Q9UKP4 1686 aa10.56□□□□□ -0.72
NECTIN1-204ENST00000524429 LRRC37A3O60309 1634 aa10.55□□□□□ -0.72
NECTIN1-204ENST00000524429 ZC3H6P61129 1189 aaKnown RBP10.55□□□□□ -0.72
NECTIN1-204ENST00000524429 PDE4DQ08499 809 aa10.55□□□□□ -0.72
NECTIN1-204ENST00000524429 DSG2Q14126 1118 aa10.55□□□□□ -0.72
NECTIN1-204ENST00000524429 DDX27Q96GQ7 796 aaKnown RBP10.55□□□□□ -0.72
NECTIN1-204ENST00000524429 PRDM11Q9NQV5 511 aa10.55□□□□□ -0.72
NECTIN1-204ENST00000524429 SCN11AQ9UI33 1791 aa10.54□□□□□ -0.72
NECTIN1-204ENST00000524429 TRIM66O15016 1216 aa10.54□□□□□ -0.72
NECTIN1-204ENST00000524429 U2SURPO15042 1029 aaKnown RBP10.54□□□□□ -0.72
NECTIN1-204ENST00000524429 ANKRD24Q8TF21 1146 aa10.54□□□□□ -0.72
NECTIN1-204ENST00000524429 KCNK17Q96T54 332 aa10.54□□□□□ -0.72
NECTIN1-204ENST00000524429 WDR17Q8IZU2 1322 aa10.54□□□□□ -0.72
NECTIN1-204ENST00000524429 CRB1P82279 1406 aa10.53□□□□□ -0.72
NECTIN1-204ENST00000524429 SIPA1L3O60292 1781 aaPredicted RBP10.53□□□□□ -0.72
NECTIN1-204ENST00000524429 BAG6P46379 1132 aa10.53□□□□□ -0.72
NECTIN1-204ENST00000524429 HNRNPUQ00839 825 aaKnown RBP eCLIP10.53□□□□□ -0.72
NECTIN1-204ENST00000524429 FLIIQ13045 1269 aa10.53□□□□□ -0.72
NECTIN1-204ENST00000524429 R3HDM1Q15032 1099 aaKnown RBP10.53□□□□□ -0.72
NECTIN1-204ENST00000524429 CCDC27Q2M243 656 aa10.53□□□□□ -0.72
NECTIN1-204ENST00000524429 KRT27Q7Z3Y8 459 aa10.53□□□□□ -0.72
NECTIN1-204ENST00000524429 EYA1Q99502 592 aa10.53□□□□□ -0.72
NECTIN1-204ENST00000524429 MAPK8IP3Q9UPT6 1336 aa10.53□□□□□ -0.72
NECTIN1-204ENST00000524429 FAM83GA6ND36 823 aa10.52□□□□□ -0.73
NECTIN1-204ENST00000524429 ZNF521Q96K83 1311 aa10.52□□□□□ -0.73
NECTIN1-204ENST00000524429 ZBTB7CA1YPR0 619 aa10.51□□□□□ -0.73
NECTIN1-204ENST00000524429 NEFMP07197 916 aa10.51□□□□□ -0.73
NECTIN1-204ENST00000524429 PRKAR2BP31323 418 aa10.51□□□□□ -0.73
NECTIN1-204ENST00000524429 EN1Q05925 392 aaPredicted RBP10.51□□□□□ -0.73
NECTIN1-204ENST00000524429 RBM26Q5T8P6 1007 aaKnown RBP10.51□□□□□ -0.73
NECTIN1-204ENST00000524429 NBPF6Q5VWK0 638 aa10.51□□□□□ -0.73
NECTIN1-204ENST00000524429 SULT6B1Q6IMI4 303 aa10.51□□□□□ -0.73
NECTIN1-204ENST00000524429 NBPF4Q96M43 638 aa10.51□□□□□ -0.73
NECTIN1-204ENST00000524429 OVOS2A0A0G2JMS6 1433 aa10.5□□□□□ -0.73
NECTIN1-204ENST00000524429 ONECUT3O60422 494 aaPredicted RBP10.5□□□□□ -0.73
NECTIN1-204ENST00000524429 PDIA4P13667 645 aaKnown RBP10.5□□□□□ -0.73
NECTIN1-204ENST00000524429 PDE3BQ13370 1112 aa10.5□□□□□ -0.73
NECTIN1-204ENST00000524429 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
NECTIN1-204ENST00000524429 CHRNA2Q15822 529 aa10.5□□□□□ -0.73
NECTIN1-204ENST00000524429 TCP11L2Q8N4U5 519 aa10.5□□□□□ -0.73
NECTIN1-204ENST00000524429 CACNA1FO60840 1977 aa10.49□□□□□ -0.73
NECTIN1-204ENST00000524429 APAF1O14727 1248 aa10.49□□□□□ -0.73
NECTIN1-204ENST00000524429 HMOX1P09601 288 aa10.49□□□□□ -0.73
NECTIN1-204ENST00000524429 VPS72Q15906 364 aa10.49□□□□□ -0.73
NECTIN1-204ENST00000524429 AEBP1Q8IUX7 1158 aa10.49□□□□□ -0.73
NECTIN1-204ENST00000524429 CCDC146Q8IYE0 955 aa10.49□□□□□ -0.73
NECTIN1-204ENST00000524429 DDRGK1Q96HY6 314 aa10.49□□□□□ -0.73
NECTIN1-204ENST00000524429 YTHDC1Q96MU7 727 aaKnown RBP10.49□□□□□ -0.73
NECTIN1-204ENST00000524429 CARD10Q9BWT7 1032 aa10.49□□□□□ -0.73
NECTIN1-204ENST00000524429 CCDC9Q9Y3X0 531 aaKnown RBP10.49□□□□□ -0.73
NECTIN1-204ENST00000524429 MEGF6O75095 1541 aa10.48□□□□□ -0.73
NECTIN1-204ENST00000524429 THSD7AQ9UPZ6 1657 aa10.48□□□□□ -0.73
NECTIN1-204ENST00000524429 KDM3BQ7LBC6 1761 aa10.48□□□□□ -0.73
NECTIN1-204ENST00000524429 TMPOP42166 694 aaKnown RBP10.48□□□□□ -0.73
NECTIN1-204ENST00000524429 LMOD3Q0VAK6 560 aa10.48□□□□□ -0.73
NECTIN1-204ENST00000524429 NFE2L2Q16236 605 aa10.48□□□□□ -0.73
NECTIN1-204ENST00000524429 IRX2Q9BZI1 471 aaPredicted RBP10.48□□□□□ -0.73
NECTIN1-204ENST00000524429 CRISPLD2Q9H0B8 497 aa10.48□□□□□ -0.73
NECTIN1-204ENST00000524429 BTG4Q9NY30 223 aa10.48□□□□□ -0.73
NECTIN1-204ENST00000524429 VPS9D1Q9Y2B5 631 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms