RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 FAM117AQ9C073 453 aa9.49□□□□□ -0.89
PCM1-223ENST00000524356 ATXN7O15265 892 aaPredicted RBP9.48□□□□□ -0.89
PCM1-223ENST00000524356 MAPTP10636 758 aaKnown RBP9.48□□□□□ -0.89
PCM1-223ENST00000524356 PCBP4P57723 403 aaKnown RBP9.48□□□□□ -0.89
PCM1-223ENST00000524356 MCCD1P59942 119 aaPredicted RBP9.48□□□□□ -0.89
PCM1-223ENST00000524356 TNP2Q05952 138 aa9.48□□□□□ -0.89
PCM1-223ENST00000524356 GOLGA2P5Q9HBQ8 144 aa9.48□□□□□ -0.89
PCM1-223ENST00000524356 PLA2G4AP47712 749 aa9.47□□□□□ -0.89
PCM1-223ENST00000524356 NR1H3Q13133 447 aa9.47□□□□□ -0.89
PCM1-223ENST00000524356 NLRP8Q86W28 1048 aa9.47□□□□□ -0.89
PCM1-223ENST00000524356 TBC1D9Q6ZT07 1266 aa9.46□□□□□ -0.9
PCM1-223ENST00000524356 CCDC85AQ96PX6 553 aaPredicted RBP9.46□□□□□ -0.9
PCM1-223ENST00000524356 ETNK1Q9HBU6 452 aa9.46□□□□□ -0.9
PCM1-223ENST00000524356 MYCP01106 439 aaPredicted RBP9.45□□□□□ -0.9
PCM1-223ENST00000524356 LRP8Q14114 963 aa9.45□□□□□ -0.9
PCM1-223ENST00000524356 ZNF468Q5VIY5 522 aaPredicted RBP9.45□□□□□ -0.9
PCM1-223ENST00000524356 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
PCM1-223ENST00000524356 APBA3O96018 575 aa9.44□□□□□ -0.9
PCM1-223ENST00000524356 PRRT3Q5FWE3 981 aa9.44□□□□□ -0.9
PCM1-223ENST00000524356 ESCO1Q5FWF5 840 aa9.44□□□□□ -0.9
PCM1-223ENST00000524356 DDRGK1Q96HY6 314 aa9.44□□□□□ -0.9
PCM1-223ENST00000524356 GPBP1L1Q9HC44 474 aaPredicted RBP9.44□□□□□ -0.9
PCM1-223ENST00000524356 TLR1Q15399 786 aa9.43□□□□□ -0.9
PCM1-223ENST00000524356 MDFIQ99750 246 aa9.43□□□□□ -0.9
PCM1-223ENST00000524356 KDM4CQ9H3R0 1056 aa9.43□□□□□ -0.9
PCM1-223ENST00000524356 KHNYNO15037 678 aaKnown RBP9.42□□□□□ -0.9
PCM1-223ENST00000524356 GPR37L1O60883 481 aa9.42□□□□□ -0.9
PCM1-223ENST00000524356 COL9A3Q14050 684 aaPredicted RBP9.42□□□□□ -0.9
PCM1-223ENST00000524356 C1orf216Q8TAB5 229 aa9.42□□□□□ -0.9
PCM1-223ENST00000524356 ELOA3CA0A087WX78 387 aaPredicted RBP9.41□□□□□ -0.9
PCM1-223ENST00000524356 SPDYE3A6NKU9 549 aa9.41□□□□□ -0.9
PCM1-223ENST00000524356 ELOA3DA6NLF2 546 aaPredicted RBP9.41□□□□□ -0.9
PCM1-223ENST00000524356 HYAL3O43820 417 aaPredicted RBP9.41□□□□□ -0.9
PCM1-223ENST00000524356 ELOA3BQ3SY89 546 aa9.41□□□□□ -0.9
PCM1-223ENST00000524356 ELOA3Q8NG57 546 aa9.41□□□□□ -0.9
PCM1-223ENST00000524356 ZNF592Q92610 1267 aa9.41□□□□□ -0.9
PCM1-223ENST00000524356 A0A1W2PNR3 127 aa9.4□□□□□ -0.9
PCM1-223ENST00000524356 STRN4Q9NRL3 753 aa9.4□□□□□ -0.9
PCM1-223ENST00000524356 PRR12Q9ULL5 1215 aa9.39□□□□□ -0.91
PCM1-223ENST00000524356 FAM157BP0CG42 384 aa9.38□□□□□ -0.91
PCM1-223ENST00000524356 GRIK4Q16099 956 aa9.38□□□□□ -0.91
PCM1-223ENST00000524356 TMEM259Q4ZIN3 620 aa9.38□□□□□ -0.91
PCM1-223ENST00000524356 TSGA10IPQ3SY00 556 aa9.37□□□□□ -0.91
PCM1-223ENST00000524356 AIDAQ96BJ3 306 aa9.37□□□□□ -0.91
PCM1-223ENST00000524356 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
PCM1-223ENST00000524356 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
PCM1-223ENST00000524356 M0R082 166 aa9.36□□□□□ -0.91
PCM1-223ENST00000524356 H2AFB1P0C5Y9 115 aa9.36□□□□□ -0.91
PCM1-223ENST00000524356 H2AFB2P0C5Z0 115 aa9.36□□□□□ -0.91
PCM1-223ENST00000524356 ARSJQ5FYB0 599 aaPredicted RBP9.36□□□□□ -0.91
PCM1-223ENST00000524356 ZNF295-AS1Q8N0V1 137 aa9.36□□□□□ -0.91
PCM1-223ENST00000524356 ZNF417Q8TAU3 575 aa9.36□□□□□ -0.91
PCM1-223ENST00000524356 ZNF587Q96SQ5 575 aaPredicted RBP9.36□□□□□ -0.91
PCM1-223ENST00000524356 NACC1Q96RE7 527 aa9.35□□□□□ -0.91
PCM1-223ENST00000524356 NIFKQ9BYG3 293 aaKnown RBP9.35□□□□□ -0.91
PCM1-223ENST00000524356 EFSO43281 561 aa9.34□□□□□ -0.91
PCM1-223ENST00000524356 ALAS2P22557 587 aa9.34□□□□□ -0.91
PCM1-223ENST00000524356 SCNN1DP51172 638 aa9.34□□□□□ -0.91
PCM1-223ENST00000524356 C8orf86Q6ZUL3 223 aa9.34□□□□□ -0.91
PCM1-223ENST00000524356 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
PCM1-223ENST00000524356 PRDM6Q9NQX0 595 aa9.34□□□□□ -0.91
PCM1-223ENST00000524356 MARK1Q9P0L2 795 aa9.34□□□□□ -0.91
PCM1-223ENST00000524356 STARD13Q9Y3M8 1113 aa9.34□□□□□ -0.91
PCM1-223ENST00000524356 TRIM28Q13263 835 aaKnown RBP9.33□□□□□ -0.92
PCM1-223ENST00000524356 ZIC5Q96T25 663 aa9.33□□□□□ -0.92
PCM1-223ENST00000524356 ALBP02768 609 aa9.32□□□□□ -0.92
PCM1-223ENST00000524356 NID1P14543 1247 aa9.32□□□□□ -0.92
PCM1-223ENST00000524356 ADGRE1Q14246 886 aa9.31□□□□□ -0.92
PCM1-223ENST00000524356 MBTPS1Q14703 1052 aa9.31□□□□□ -0.92
PCM1-223ENST00000524356 SAMD5Q5TGI4 173 aa9.31□□□□□ -0.92
PCM1-223ENST00000524356 ADARB2-AS1A8MUL3 147 aa9.3□□□□□ -0.92
PCM1-223ENST00000524356 SIN3BO75182 1162 aa9.3□□□□□ -0.92
PCM1-223ENST00000524356 INHAP05111 366 aa9.3□□□□□ -0.92
PCM1-223ENST00000524356 USP4Q13107 963 aa9.3□□□□□ -0.92
PCM1-223ENST00000524356 LAMC2Q13753 1193 aa9.3□□□□□ -0.92
PCM1-223ENST00000524356 NBPF1Q3BBV0 1214 aa9.3□□□□□ -0.92
PCM1-223ENST00000524356 MCTP1Q6DN14 999 aa9.3□□□□□ -0.92
PCM1-223ENST00000524356 MICALL1Q8N3F8 863 aa9.3□□□□□ -0.92
PCM1-223ENST00000524356 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
PCM1-223ENST00000524356 GDF10P55107 478 aa9.29□□□□□ -0.92
PCM1-223ENST00000524356 PHTF2Q8N3S3 785 aa9.29□□□□□ -0.92
PCM1-223ENST00000524356 ZDHHC3Q9NYG2 299 aa9.29□□□□□ -0.92
PCM1-223ENST00000524356 USP3Q9Y6I4 520 aa9.29□□□□□ -0.92
PCM1-223ENST00000524356 SELPP16109 830 aa9.28□□□□□ -0.92
PCM1-223ENST00000524356 SMTNP53814 917 aa9.28□□□□□ -0.92
PCM1-223ENST00000524356 IQSEC3Q9UPP2 1182 aaPredicted RBP9.28□□□□□ -0.92
PCM1-223ENST00000524356 C9orf172C9J069 976 aa9.27□□□□□ -0.93
PCM1-223ENST00000524356 TATP17735 454 aaPredicted RBP9.27□□□□□ -0.93
PCM1-223ENST00000524356 TNFRSF25Q93038 417 aa9.27□□□□□ -0.93
PCM1-223ENST00000524356 KRTAP4-7Q9BYR0 210 aa9.27□□□□□ -0.93
PCM1-223ENST00000524356 GJA3Q9Y6H8 435 aa9.27□□□□□ -0.93
PCM1-223ENST00000524356 TXNRD3Q86VQ6 643 aa9.26□□□□□ -0.93
PCM1-223ENST00000524356 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
PCM1-223ENST00000524356 SLC30A3Q99726 388 aa9.25□□□□□ -0.93
PCM1-223ENST00000524356 C20orf204Q6ZNR8 217 aa9.24□□□□□ -0.93
PCM1-223ENST00000524356 MTMR14Q8NCE2 650 aa9.24□□□□□ -0.93
PCM1-223ENST00000524356 NDUFB9Q9Y6M9 179 aa9.24□□□□□ -0.93
PCM1-223ENST00000524356 LCE1DQ5T752 114 aa9.23□□□□□ -0.93
PCM1-223ENST00000524356 SHISA2Q6UWI4 295 aa9.23□□□□□ -0.93
PCM1-223ENST00000524356 TP53INP1Q96A56 240 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms