RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 RGPD5Q99666 1765 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 ALDH1L1O75891 902 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 USP44Q9H0E7 712 aa6.7□□□□□ -1.34
CLINT1-208ENST00000524306 UTYO14607 1347 aa6.69□□□□□ -1.34
CLINT1-208ENST00000524306 COL15A1P39059 1388 aa6.69□□□□□ -1.34
CLINT1-208ENST00000524306 GOLGA6L3A6NEY3 463 aa6.69□□□□□ -1.34
CLINT1-208ENST00000524306 INTS4Q96HW7 963 aaKnown RBP6.69□□□□□ -1.34
CLINT1-208ENST00000524306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.69□□□□□ -1.34
CLINT1-208ENST00000524306 ZNF831Q5JPB2 1677 aa6.69□□□□□ -1.34
CLINT1-208ENST00000524306 MX1P20591 662 aa6.69□□□□□ -1.34
CLINT1-208ENST00000524306 FKBP5Q13451 457 aaPredicted RBP6.69□□□□□ -1.34
CLINT1-208ENST00000524306 GOLGA6L22H0YM25 854 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 CUL4AQ13619 759 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 C16orf71Q8IYS4 520 aaPredicted RBP6.68□□□□□ -1.34
CLINT1-208ENST00000524306 ESYT1Q9BSJ8 1104 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 SOS2Q07890 1332 aaPredicted RBP6.68□□□□□ -1.34
CLINT1-208ENST00000524306 TTC41PQ6P2S7 1318 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 NUTM2FA1L443 756 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 UBTFL1P0CB47 393 aaPredicted RBP6.68□□□□□ -1.34
CLINT1-208ENST00000524306 MCCP23508 829 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 KLHL40Q2TBA0 621 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 BEND3Q5T5X7 828 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 HDGFL1Q5TGJ6 251 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 NBPF6Q5VWK0 638 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 TICAM2Q86XR7 235 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 NBPF4Q96M43 638 aa6.68□□□□□ -1.34
CLINT1-208ENST00000524306 PLEKHG5O94827 1062 aa6.67□□□□□ -1.34
CLINT1-208ENST00000524306 CD2BP2O95400 341 aaKnown RBP6.67□□□□□ -1.34
CLINT1-208ENST00000524306 GLI3P10071 1580 aa6.67□□□□□ -1.34
CLINT1-208ENST00000524306 NRAPQ86VF7 1730 aa6.67□□□□□ -1.34
CLINT1-208ENST00000524306 F6X3S4 739 aa6.67□□□□□ -1.34
CLINT1-208ENST00000524306 RNMTO43148 476 aaKnown RBP6.67□□□□□ -1.34
CLINT1-208ENST00000524306 CHMLP26374 656 aa6.67□□□□□ -1.34
CLINT1-208ENST00000524306 PROSER2Q86WR7 435 aaPredicted RBP6.67□□□□□ -1.34
CLINT1-208ENST00000524306 OTUD7AQ8TE49 926 aaPredicted RBP6.67□□□□□ -1.34
CLINT1-208ENST00000524306 KIF1BPQ96EK5 621 aa6.67□□□□□ -1.34
CLINT1-208ENST00000524306 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.67□□□□□ -1.34
CLINT1-208ENST00000524306 MIS18AQ9NYP9 233 aa6.67□□□□□ -1.34
CLINT1-208ENST00000524306 DBF4Q9UBU7 674 aaPredicted RBP6.67□□□□□ -1.34
CLINT1-208ENST00000524306 ADCY9O60503 1353 aa6.67□□□□□ -1.34
CLINT1-208ENST00000524306 SPATA31A3Q5VYP0 1347 aa6.67□□□□□ -1.34
CLINT1-208ENST00000524306 ERC1Q8IUD2 1116 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 DNAAF4Q8WXU2 420 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 SNRKQ9NRH2 765 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 PNMA6EA0A0J9YXQ4 647 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 GCP02774 474 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 PDIA4P13667 645 aaKnown RBP6.66□□□□□ -1.34
CLINT1-208ENST00000524306 ZNF445P59923 1031 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 SLC4A10Q6U841 1118 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 KCNB2Q92953 911 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 HYPKQ9NX55 129 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 LRRFIP2Q9Y608 721 aaKnown RBP6.66□□□□□ -1.34
CLINT1-208ENST00000524306 COL16A1Q07092 1604 aaPredicted RBP6.66□□□□□ -1.34
CLINT1-208ENST00000524306 SMARCA5O60264 1052 aaPredicted RBP6.66□□□□□ -1.34
CLINT1-208ENST00000524306 BAG4O95429 457 aaKnown RBP6.66□□□□□ -1.34
CLINT1-208ENST00000524306 XRCC6P12956 609 aaKnown RBP eCLIP6.66□□□□□ -1.34
CLINT1-208ENST00000524306 BRPF3Q9ULD4 1205 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 ROBO1Q9Y6N7 1651 aa6.66□□□□□ -1.34
CLINT1-208ENST00000524306 GIGYF1O75420 1035 aaPredicted RBP6.65□□□□□ -1.34
CLINT1-208ENST00000524306 HSP90AA1P07900 732 aaKnown RBP6.65□□□□□ -1.34
CLINT1-208ENST00000524306 ATF3P18847 181 aa6.65□□□□□ -1.34
CLINT1-208ENST00000524306 HSPA4P34932 840 aa6.65□□□□□ -1.34
CLINT1-208ENST00000524306 PI4K2BQ8TCG2 481 aa6.65□□□□□ -1.34
CLINT1-208ENST00000524306 KSR2Q6VAB6 950 aa6.65□□□□□ -1.35
CLINT1-208ENST00000524306 RHPN1Q8TCX5 695 aa6.65□□□□□ -1.35
CLINT1-208ENST00000524306 RFX7Q2KHR2 1363 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 BTBD11A6QL63 1104 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 TEFQ10587 303 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 ESCO1Q5FWF5 840 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 C1orf141Q5JVX7 400 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 ZNF530Q6P9A1 599 aaPredicted RBP6.64□□□□□ -1.35
CLINT1-208ENST00000524306 RBM42Q9BTD8 480 aaKnown RBP6.64□□□□□ -1.35
CLINT1-208ENST00000524306 GRPEL1Q9HAV7 217 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 RAD50Q92878 1312 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 GLRX3O76003 335 aaKnown RBP6.64□□□□□ -1.35
CLINT1-208ENST00000524306 PPP1R42Q7Z4L9 355 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 DDX21Q9NR30 783 aaKnown RBP eCLIP6.64□□□□□ -1.35
CLINT1-208ENST00000524306 EXOC6BQ9Y2D4 811 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 RREB1Q92766 1687 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 ERBB3P21860 1342 aa6.64□□□□□ -1.35
CLINT1-208ENST00000524306 SOX12O15370 315 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 SGSM2O43147 1006 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 DDX58O95786 925 aaKnown RBP6.63□□□□□ -1.35
CLINT1-208ENST00000524306 KRT28Q7Z3Y7 464 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 CNTROBQ8N137 903 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 LINS1Q8NG48 757 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 ANKRD24Q8TF21 1146 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 TM6SF1Q9BZW5 370 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 LGR6Q9HBX8 967 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 ERBB4Q15303 1308 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 HIP1O00291 1037 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 BRD1O95696 1058 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 SSFA2P28290 1259 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 PPP1R9BQ96SB3 815 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 ALDH8A1Q9H2A2 487 aaPredicted RBP6.63□□□□□ -1.35
CLINT1-208ENST00000524306 PHAXQ9H814 394 aaKnown RBP6.63□□□□□ -1.35
CLINT1-208ENST00000524306 LMBRD1Q9NUN5 540 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 CHPF2Q9P2E5 772 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 AK9Q5TCS8 1911 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 COL5A2P05997 1499 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms