RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 PPFIA3O75145 1194 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 NAT2P11245 290 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 TBX4P57082 545 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 MAPRE1Q15691 268 aaKnown RBP7.82□□□□□ -1.16
SDC2-208ENST00000523877 CHCHD4Q8N4Q1 142 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 TBC1D22AQ8WUA7 517 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 GOLGA1Q92805 767 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 MPP4Q96JB8 637 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 DEF6Q9H4E7 631 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 CALCOCO1Q9P1Z2 691 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 KLF15Q9UIH9 416 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 PRR12Q9ULL5 1215 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 G3BP2Q9UN86 482 aaKnown RBP7.82□□□□□ -1.16
SDC2-208ENST00000523877 DIS3Q9Y2L1 958 aaKnown RBP7.82□□□□□ -1.16
SDC2-208ENST00000523877 RIMBP3CA6NJZ7 1639 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 RIMBP3BA6NNM3 1639 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 RIMBP3Q9UFD9 1639 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 RAD50Q92878 1312 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 ANKRD33BA6NCL7 494 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 NPHP1O15259 732 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 ATG7O95352 703 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 HSPA5P11021 654 aaKnown RBP7.81□□□□□ -1.16
SDC2-208ENST00000523877 RPL17P18621 184 aaKnown RBP7.81□□□□□ -1.16
SDC2-208ENST00000523877 WASHC5Q12768 1159 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 MCM6Q14566 821 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 JAKMIP3Q5VZ66 844 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.81□□□□□ -1.16
SDC2-208ENST00000523877 PAF1Q8N7H5 531 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 RUNDC1Q96C34 613 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 IWS1Q96ST2 819 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 KIF2CQ99661 725 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 LNPKQ9C0E8 428 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 CWC15Q9P013 229 aaKnown RBP7.81□□□□□ -1.16
SDC2-208ENST00000523877 ACAD8Q9UKU7 415 aa7.81□□□□□ -1.16
SDC2-208ENST00000523877 IQSEC3Q9UPP2 1182 aaPredicted RBP7.81□□□□□ -1.16
SDC2-208ENST00000523877 PPP1R37O75864 691 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 TRIM37O94972 964 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 LDHCP07864 332 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 CAPN2P17655 700 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 CLK1P49759 484 aaKnown RBP7.8□□□□□ -1.16
SDC2-208ENST00000523877 ZSCAN26Q16670 478 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 IQCEQ6IPM2 695 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 POTEEQ6S8J3 1075 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 NFXL1Q6ZNB6 911 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 KRT77Q7Z794 578 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 TTC30AQ86WT1 665 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 MYO1HQ8N1T3 1032 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 FAM184AQ8NB25 1140 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 SMARCC1Q92922 1105 aaPredicted RBP7.8□□□□□ -1.16
SDC2-208ENST00000523877 IL17RAQ96F46 866 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 CEP89Q96ST8 783 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 RWDD1Q9H446 243 aaPredicted RBP7.8□□□□□ -1.16
SDC2-208ENST00000523877 TMCC3Q9ULS5 477 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 NESP48681 1621 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 NINLQ9Y2I6 1382 aa7.8□□□□□ -1.16
SDC2-208ENST00000523877 SHTN1A0MZ66 631 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 C2orf72A6NCS6 295 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 NUDT7P0C024 238 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 TGFB3P10600 412 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 COL6A1P12109 1028 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 GUCY2CP25092 1073 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 PTGER2P43116 358 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 ZNF132P52740 706 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 SESN3P58005 492 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
SDC2-208ENST00000523877 CHAF1AQ13111 956 aaPredicted RBP7.79□□□□□ -1.16
SDC2-208ENST00000523877 DHX8Q14562 1220 aaKnown RBP7.79□□□□□ -1.16
SDC2-208ENST00000523877 PLEKHG6Q3KR16 790 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 FMNL3Q8IVF7 1028 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 SLF2Q8IX21 1173 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 GOLGA6L1Q8N7Z2 621 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 SVIPQ8NHG7 77 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 PMFBP1Q8TBY8 1022 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 CCDC34Q96HJ3 373 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 ZNF512BQ96KM6 892 aaPredicted RBP7.79□□□□□ -1.16
SDC2-208ENST00000523877 MUC3BQ9H195 1237 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 USP25Q9UHP3 1055 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 RABL2BQ9UNT1 228 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 LAMC3Q9Y6N6 1575 aa7.79□□□□□ -1.16
SDC2-208ENST00000523877 HMGXB3Q12766 1538 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 DYNC1I1O14576 645 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 TRIM66O15016 1216 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 VCAM1P19320 739 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 ABL2P42684 1182 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 ZNF131P52739 623 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 FAM160A1Q05DH4 1040 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 TRIM29Q14134 588 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 BMS1Q14692 1282 aaKnown RBP7.78□□□□□ -1.16
SDC2-208ENST00000523877 NFE2L2Q16236 605 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 CCDC91Q7Z6B0 441 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 ARHGEF25Q86VW2 580 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 NDUFAF2Q8N183 169 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 MIGA1Q8NAN2 632 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 TDRD7Q8NHU6 1098 aaKnown RBP7.78□□□□□ -1.16
SDC2-208ENST00000523877 CDK5RAP3Q96JB5 506 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 NOL10Q9BSC4 688 aaKnown RBP7.78□□□□□ -1.16
SDC2-208ENST00000523877 BCL2L13Q9BXK5 485 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 CUEDC1Q9NWM3 386 aaPredicted RBP7.78□□□□□ -1.16
SDC2-208ENST00000523877 SUFUQ9UMX1 484 aa7.78□□□□□ -1.16
SDC2-208ENST00000523877 TBC1D2BQ9UPU7 963 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms