RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, humanhuman

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-215ENST00000523799 SMC1BQ8NDV3 1235 aa11.96□□□□□ -0.49
CCNC-215ENST00000523799 RGPD2P0DJD1 1756 aa11.95□□□□□ -0.5
CCNC-215ENST00000523799 SNPHO15079 494 aa11.95□□□□□ -0.5
CCNC-215ENST00000523799 PHF14O94880 888 aa11.95□□□□□ -0.5
CCNC-215ENST00000523799 NME9Q86XW9 330 aa11.95□□□□□ -0.5
CCNC-215ENST00000523799 LTV1Q96GA3 475 aaPredicted RBP11.95□□□□□ -0.5
CCNC-215ENST00000523799 C9orf131Q5VYM1 1079 aa11.94□□□□□ -0.5
CCNC-215ENST00000523799 SMARCC1Q92922 1105 aaPredicted RBP11.94□□□□□ -0.5
CCNC-215ENST00000523799 TMEM121BQ9BXQ6 578 aaPredicted RBP11.94□□□□□ -0.5
CCNC-215ENST00000523799 SBNO2Q9Y2G9 1366 aa11.93□□□□□ -0.5
CCNC-215ENST00000523799 ITGB4P16144 1822 aa11.93□□□□□ -0.5
CCNC-215ENST00000523799 MEGF6O75095 1541 aa11.93□□□□□ -0.5
CCNC-215ENST00000523799 KCPQ6ZWJ8 1503 aa11.93□□□□□ -0.5
CCNC-215ENST00000523799 AMIGO3Q86WK7 504 aa11.93□□□□□ -0.5
CCNC-215ENST00000523799 A0A0G2JLW4 131 aa11.92□□□□□ -0.5
CCNC-215ENST00000523799 FCHSD2O94868 740 aa11.92□□□□□ -0.5
CCNC-215ENST00000523799 MMP10P09238 476 aa11.92□□□□□ -0.5
CCNC-215ENST00000523799 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
CCNC-215ENST00000523799 RRAGCQ9HB90 399 aa11.92□□□□□ -0.5
CCNC-215ENST00000523799 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.92□□□□□ -0.5
CCNC-215ENST00000523799 SBF1O95248 1867 aa11.91□□□□□ -0.5
CCNC-215ENST00000523799 MPRIPQ6WCQ1 1025 aa11.91□□□□□ -0.5
CCNC-215ENST00000523799 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
CCNC-215ENST00000523799 HDGFL2Q7Z4V5 671 aaPredicted RBP11.9□□□□□ -0.5
CCNC-215ENST00000523799 RAPGEF4Q8WZA2 1011 aa11.9□□□□□ -0.5
CCNC-215ENST00000523799 RYDENQ9NUL5 291 aaKnown RBP11.9□□□□□ -0.5
CCNC-215ENST00000523799 MAP2P11137 1827 aaKnown RBP11.9□□□□□ -0.5
CCNC-215ENST00000523799 CD163L1Q9NR16 1453 aa11.89□□□□□ -0.51
CCNC-215ENST00000523799 PCDH11XQ9BZA7 1347 aa11.89□□□□□ -0.51
CCNC-215ENST00000523799 PCDH11YQ9BZA8 1340 aa11.89□□□□□ -0.51
CCNC-215ENST00000523799 HOXC9P31274 260 aa11.89□□□□□ -0.51
CCNC-215ENST00000523799 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
CCNC-215ENST00000523799 DPEP1P16444 411 aa11.88□□□□□ -0.51
CCNC-215ENST00000523799 AMPHP49418 695 aa11.88□□□□□ -0.51
CCNC-215ENST00000523799 C3orf67Q6ZVT6 689 aa11.88□□□□□ -0.51
CCNC-215ENST00000523799 SMIM5Q71RC9 77 aa11.88□□□□□ -0.51
CCNC-215ENST00000523799 NLGN1Q8N2Q7 840 aa11.88□□□□□ -0.51
CCNC-215ENST00000523799 CCDC87Q9NVE4 849 aa11.88□□□□□ -0.51
CCNC-215ENST00000523799 RNF181Q9P0P0 153 aa11.88□□□□□ -0.51
CCNC-215ENST00000523799 MAP3K19Q56UN5 1328 aa11.87□□□□□ -0.51
CCNC-215ENST00000523799 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
CCNC-215ENST00000523799 C4AP0C0L4 1744 aa11.87□□□□□ -0.51
CCNC-215ENST00000523799 GNPATO15228 680 aa11.87□□□□□ -0.51
CCNC-215ENST00000523799 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
CCNC-215ENST00000523799 TERF2IPQ9NYB0 399 aa11.87□□□□□ -0.51
CCNC-215ENST00000523799 PIM2Q9P1W9 311 aa11.87□□□□□ -0.51
CCNC-215ENST00000523799 BOLA1Q9Y3E2 137 aa11.87□□□□□ -0.51
CCNC-215ENST00000523799 LOC102724428A0A0B4J2F2 783 aa11.86□□□□□ -0.51
CCNC-215ENST00000523799 VEGFAP15692 232 aaPredicted RBP11.86□□□□□ -0.51
CCNC-215ENST00000523799 SIK1P57059 783 aa11.86□□□□□ -0.51
CCNC-215ENST00000523799 TMF1P82094 1093 aa11.86□□□□□ -0.51
CCNC-215ENST00000523799 LINC00116Q8NCU8 138 aa11.86□□□□□ -0.51
CCNC-215ENST00000523799 TMC1Q8TDI8 760 aa11.86□□□□□ -0.51
CCNC-215ENST00000523799 DCAF5Q96JK2 942 aa11.86□□□□□ -0.51
CCNC-215ENST00000523799 PRDM10Q9NQV6 1147 aa11.86□□□□□ -0.51
CCNC-215ENST00000523799 SMG6Q86US8 1419 aaKnown RBP11.86□□□□□ -0.51
CCNC-215ENST00000523799 RTL1A6NKG5 1358 aa11.85□□□□□ -0.51
CCNC-215ENST00000523799 KCNA3P22001 575 aa11.85□□□□□ -0.51
CCNC-215ENST00000523799 DALRD3Q5D0E6 543 aaKnown RBP11.85□□□□□ -0.51
CCNC-215ENST00000523799 NBPF6Q5VWK0 638 aa11.85□□□□□ -0.51
CCNC-215ENST00000523799 PIGBQ92521 554 aa11.85□□□□□ -0.51
CCNC-215ENST00000523799 NBPF4Q96M43 638 aa11.85□□□□□ -0.51
CCNC-215ENST00000523799 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
CCNC-215ENST00000523799 PPP1R37O75864 691 aa11.84□□□□□ -0.51
CCNC-215ENST00000523799 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
CCNC-215ENST00000523799 COG3Q96JB2 828 aa11.84□□□□□ -0.51
CCNC-215ENST00000523799 PARP3Q9Y6F1 533 aa11.84□□□□□ -0.51
CCNC-215ENST00000523799 ROCK2O75116 1388 aaKnown RBP11.83□□□□□ -0.52
CCNC-215ENST00000523799 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
CCNC-215ENST00000523799 RTCBQ9Y3I0 505 aaKnown RBP11.83□□□□□ -0.52
CCNC-215ENST00000523799 A0A1W2PP64 1363 aa11.82□□□□□ -0.52
CCNC-215ENST00000523799 GLTPD2A6NH11 291 aa11.82□□□□□ -0.52
CCNC-215ENST00000523799 CYP27B1O15528 508 aa11.82□□□□□ -0.52
CCNC-215ENST00000523799 ATP6V1AP38606 617 aa11.82□□□□□ -0.52
CCNC-215ENST00000523799 FAM161AQ3B820 660 aa11.82□□□□□ -0.52
CCNC-215ENST00000523799 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
CCNC-215ENST00000523799 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
CCNC-215ENST00000523799 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
CCNC-215ENST00000523799 G3V3G9 751 aa11.81□□□□□ -0.52
CCNC-215ENST00000523799 FOXN1O15353 648 aa11.81□□□□□ -0.52
CCNC-215ENST00000523799 CTCFP49711 727 aaPredicted RBP11.81□□□□□ -0.52
CCNC-215ENST00000523799 ITPK1Q13572 414 aa11.81□□□□□ -0.52
CCNC-215ENST00000523799 CCDC88AQ3V6T2 1871 aa11.8□□□□□ -0.52
CCNC-215ENST00000523799 KDM6AO15550 1401 aaPredicted RBP11.8□□□□□ -0.52
CCNC-215ENST00000523799 GYS1P13807 737 aa11.8□□□□□ -0.52
CCNC-215ENST00000523799 AIDAQ96BJ3 306 aa11.8□□□□□ -0.52
CCNC-215ENST00000523799 TMOD3Q9NYL9 352 aa11.8□□□□□ -0.52
CCNC-215ENST00000523799 LMNB1P20700 586 aa11.79□□□□□ -0.52
CCNC-215ENST00000523799 RFC4P35249 363 aa11.79□□□□□ -0.52
CCNC-215ENST00000523799 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
CCNC-215ENST00000523799 ARHGEF1Q92888 912 aaKnown RBP11.79□□□□□ -0.52
CCNC-215ENST00000523799 PUS7Q96PZ0 661 aaKnown RBP11.79□□□□□ -0.52
CCNC-215ENST00000523799 TIAM2Q8IVF5 1701 aa11.79□□□□□ -0.52
CCNC-215ENST00000523799 SPRYD3Q8NCJ5 442 aa11.78□□□□□ -0.52
CCNC-215ENST00000523799 L3MBTL2Q969R5 705 aa11.78□□□□□ -0.52
CCNC-215ENST00000523799 MARVELD3Q96A59 401 aa11.78□□□□□ -0.52
CCNC-215ENST00000523799 MKRN1Q9UHC7 482 aaKnown RBP11.78□□□□□ -0.52
CCNC-215ENST00000523799 ASAP1Q9ULH1 1129 aa11.78□□□□□ -0.52
CCNC-215ENST00000523799 INSRP06213 1382 aa11.78□□□□□ -0.52
CCNC-215ENST00000523799 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms