RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 POTEAQ6S8J7 498 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 LINC00528Q8N1L1 170 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 STAG2Q8N3U4 1231 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 L3MBTL2Q969R5 705 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 TSEN34Q9BSV6 310 aaKnown RBP9.81□□□□□ -0.84
CPS1-211ENST00000523702 TUT1Q9H6E5 874 aaKnown RBP9.81□□□□□ -0.84
CPS1-211ENST00000523702 CABP1Q9NZU7 370 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 EGFL7Q9UHF1 273 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 FKBP4Q02790 459 aaKnown RBP eCLIP9.8□□□□□ -0.84
CPS1-211ENST00000523702 TEAD4Q15561 434 aa9.8□□□□□ -0.84
CPS1-211ENST00000523702 QTRT2Q9H974 415 aaKnown RBP9.8□□□□□ -0.84
CPS1-211ENST00000523702 BIN2Q9UBW5 565 aaPredicted RBP9.8□□□□□ -0.84
CPS1-211ENST00000523702 SERTM1A2A2V5 107 aa9.79□□□□□ -0.84
CPS1-211ENST00000523702 RNF144AP50876 292 aaPredicted RBP9.79□□□□□ -0.84
CPS1-211ENST00000523702 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
CPS1-211ENST00000523702 VTI1AQ96AJ9 217 aa9.79□□□□□ -0.84
CPS1-211ENST00000523702 NGLY1Q96IV0 654 aa9.79□□□□□ -0.84
CPS1-211ENST00000523702 RGS20O76081 388 aa9.78□□□□□ -0.84
CPS1-211ENST00000523702 AVPP01185 164 aa9.78□□□□□ -0.84
CPS1-211ENST00000523702 ARHGAP4P98171 946 aa9.78□□□□□ -0.84
CPS1-211ENST00000523702 TMEM214Q6NUQ4 689 aaKnown RBP9.78□□□□□ -0.84
CPS1-211ENST00000523702 HELQQ8TDG4 1101 aa9.78□□□□□ -0.84
CPS1-211ENST00000523702 KLRG1Q96E93 195 aa9.78□□□□□ -0.84
CPS1-211ENST00000523702 POLMQ9NP87 494 aaPredicted RBP9.78□□□□□ -0.84
CPS1-211ENST00000523702 TNFRSF10BO14763 440 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 BMP1P13497 986 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 TXLNAP40222 546 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 PHKA2P46019 1235 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 C4orf17Q53FE4 359 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 SLC27A3Q5K4L6 730 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 C16orf46Q6P387 395 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 GLYCTKQ8IVS8 523 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 ALDH16A1Q8IZ83 802 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 ZNF428Q96B54 188 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 ZNF232Q9UNY5 417 aa9.77□□□□□ -0.85
CPS1-211ENST00000523702 ZBTB39O15060 712 aa9.76□□□□□ -0.85
CPS1-211ENST00000523702 BMP2P12643 396 aa9.76□□□□□ -0.85
CPS1-211ENST00000523702 GPC1P35052 558 aa9.76□□□□□ -0.85
CPS1-211ENST00000523702 MRPL14Q6P1L8 145 aaKnown RBP9.76□□□□□ -0.85
CPS1-211ENST00000523702 DNAJC14Q6Y2X3 702 aaPredicted RBP9.76□□□□□ -0.85
CPS1-211ENST00000523702 PRICKLE2Q7Z3G6 844 aa9.76□□□□□ -0.85
CPS1-211ENST00000523702 TRIM46Q7Z4K8 759 aa9.76□□□□□ -0.85
CPS1-211ENST00000523702 C7orf43Q8WVR3 580 aa9.76□□□□□ -0.85
CPS1-211ENST00000523702 NIFKQ9BYG3 293 aaKnown RBP9.76□□□□□ -0.85
CPS1-211ENST00000523702 GFRA3O60609 400 aa9.75□□□□□ -0.85
CPS1-211ENST00000523702 MPSTP25325 297 aa9.75□□□□□ -0.85
CPS1-211ENST00000523702 POU4F2Q12837 409 aa9.75□□□□□ -0.85
CPS1-211ENST00000523702 RHBDD1Q8TEB9 315 aa9.75□□□□□ -0.85
CPS1-211ENST00000523702 FIGNL2A6NMB9 653 aa9.74□□□□□ -0.85
CPS1-211ENST00000523702 NPR3P17342 541 aa9.74□□□□□ -0.85
CPS1-211ENST00000523702 SF3B2Q13435 895 aaKnown RBP9.74□□□□□ -0.85
CPS1-211ENST00000523702 NBPF15Q8N660 670 aa9.74□□□□□ -0.85
CPS1-211ENST00000523702 RNF217Q8TC41 542 aa9.74□□□□□ -0.85
CPS1-211ENST00000523702 PHACTR1Q9C0D0 580 aa9.74□□□□□ -0.85
CPS1-211ENST00000523702 PLA2G4AP47712 749 aa9.73□□□□□ -0.85
CPS1-211ENST00000523702 HIRAP54198 1017 aaPredicted RBP9.73□□□□□ -0.85
CPS1-211ENST00000523702 MARSP56192 900 aaKnown RBP9.73□□□□□ -0.85
CPS1-211ENST00000523702 MYO19Q96H55 970 aa9.73□□□□□ -0.85
CPS1-211ENST00000523702 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.73□□□□□ -0.85
CPS1-211ENST00000523702 KLK14Q9P0G3 267 aa9.73□□□□□ -0.85
CPS1-211ENST00000523702 CHMP3Q9Y3E7 222 aa9.73□□□□□ -0.85
CPS1-211ENST00000523702 UPP2O95045 317 aa9.72□□□□□ -0.85
CPS1-211ENST00000523702 RHOQP17081 205 aa9.72□□□□□ -0.85
CPS1-211ENST00000523702 AIDAQ96BJ3 306 aa9.72□□□□□ -0.85
CPS1-211ENST00000523702 DACH1Q9UI36 760 aa9.72□□□□□ -0.85
CPS1-211ENST00000523702 SPATA31C2B4DYI2 1134 aa9.71□□□□□ -0.86
CPS1-211ENST00000523702 DGKZQ13574 1117 aa9.71□□□□□ -0.86
CPS1-211ENST00000523702 NPM2Q86SE8 214 aaKnown RBP9.71□□□□□ -0.86
CPS1-211ENST00000523702 ZFP42Q96MM3 310 aa9.71□□□□□ -0.86
CPS1-211ENST00000523702 STIM2Q9P246 746 aa9.71□□□□□ -0.86
CPS1-211ENST00000523702 BCS1LQ9Y276 419 aa9.71□□□□□ -0.86
CPS1-211ENST00000523702 EIF1AXP47813 144 aaKnown RBP9.7□□□□□ -0.86
CPS1-211ENST00000523702 SMCPP49901 116 aaPredicted RBP9.7□□□□□ -0.86
CPS1-211ENST00000523702 GNASQ5JWF2 1037 aa9.7□□□□□ -0.86
CPS1-211ENST00000523702 NBPF10Q6P3W6 841 aaKnown RBP9.7□□□□□ -0.86
CPS1-211ENST00000523702 ATCAYQ86WG3 371 aa9.7□□□□□ -0.86
CPS1-211ENST00000523702 ETFBKMTQ8IXQ9 262 aa9.7□□□□□ -0.86
CPS1-211ENST00000523702 CCDC87Q9NVE4 849 aa9.7□□□□□ -0.86
CPS1-211ENST00000523702 SOS2Q07890 1332 aaPredicted RBP9.7□□□□□ -0.86
CPS1-211ENST00000523702 TTLL8A6PVC2 850 aa9.69□□□□□ -0.86
CPS1-211ENST00000523702 ST8SIA5O15466 376 aa9.69□□□□□ -0.86
CPS1-211ENST00000523702 DGAT1O75907 488 aa9.69□□□□□ -0.86
CPS1-211ENST00000523702 FAM13AO94988 1023 aa9.69□□□□□ -0.86
CPS1-211ENST00000523702 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
CPS1-211ENST00000523702 RTN1Q16799 776 aa9.69□□□□□ -0.86
CPS1-211ENST00000523702 C11orf91Q3C1V1 193 aa9.69□□□□□ -0.86
CPS1-211ENST00000523702 PKDCCQ504Y2 493 aa9.69□□□□□ -0.86
CPS1-211ENST00000523702 LYSMD3Q7Z3D4 306 aa9.69□□□□□ -0.86
CPS1-211ENST00000523702 FZD6O60353 706 aa9.68□□□□□ -0.86
CPS1-211ENST00000523702 ANKRD33BA6NCL7 494 aa9.67□□□□□ -0.86
CPS1-211ENST00000523702 NRG2O14511 850 aaPredicted RBP9.67□□□□□ -0.86
CPS1-211ENST00000523702 AXIN1O15169 862 aa9.67□□□□□ -0.86
CPS1-211ENST00000523702 MAPK1P28482 360 aa9.67□□□□□ -0.86
CPS1-211ENST00000523702 C1orf53Q5VUE5 145 aa9.67□□□□□ -0.86
CPS1-211ENST00000523702 ZNF280CQ8ND82 737 aa9.67□□□□□ -0.86
CPS1-211ENST00000523702 IFT43Q96FT9 208 aa9.67□□□□□ -0.86
CPS1-211ENST00000523702 BRD2P25440 801 aaKnown RBP9.66□□□□□ -0.86
CPS1-211ENST00000523702 SCARF1Q14162 830 aa9.66□□□□□ -0.86
CPS1-211ENST00000523702 CTC1Q2NKJ3 1217 aa9.66□□□□□ -0.86
CPS1-211ENST00000523702 AAASQ9NRG9 546 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms