RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 SRP68Q9UHB9 627 aaKnown RBP22.83■■□□□ 1.25
CCNC-213ENST00000523541 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
CCNC-213ENST00000523541 C4AP0C0L4 1744 aa22.82■■□□□ 1.24
CCNC-213ENST00000523541 MCM10Q7L590 875 aa22.82■■□□□ 1.24
CCNC-213ENST00000523541 PNISRQ8TF01 805 aaKnown RBP22.82■■□□□ 1.24
CCNC-213ENST00000523541 GOLGB1Q14789 3259 aaKnown RBP22.82■■□□□ 1.24
CCNC-213ENST00000523541 A0A087WZG4 1122 aa22.81■■□□□ 1.24
CCNC-213ENST00000523541 ZNF784Q8NCA9 323 aaPredicted RBP22.81■■□□□ 1.24
CCNC-213ENST00000523541 PRKRIP1Q9H875 184 aaPredicted RBP22.81■■□□□ 1.24
CCNC-213ENST00000523541 NARFQ9UHQ1 456 aa22.81■■□□□ 1.24
CCNC-213ENST00000523541 TGFB2P61812 414 aa22.8■■□□□ 1.24
CCNC-213ENST00000523541 ZBTB1Q9Y2K1 713 aa22.8■■□□□ 1.24
CCNC-213ENST00000523541 UBR2Q8IWV8 1755 aa22.8■■□□□ 1.24
CCNC-213ENST00000523541 CANXP27824 592 aaKnown RBP22.79■■□□□ 1.24
CCNC-213ENST00000523541 EIF5P55010 431 aaKnown RBP22.79■■□□□ 1.24
CCNC-213ENST00000523541 SIPA1L3O60292 1781 aaPredicted RBP22.78■■□□□ 1.24
CCNC-213ENST00000523541 SNRPA1P09661 255 aaKnown RBP22.78■■□□□ 1.24
CCNC-213ENST00000523541 IL6STP40189 918 aaPredicted RBP22.78■■□□□ 1.24
CCNC-213ENST00000523541 FKBP8Q14318 412 aa22.78■■□□□ 1.24
CCNC-213ENST00000523541 NPM2Q86SE8 214 aaKnown RBP22.78■■□□□ 1.24
CCNC-213ENST00000523541 ZNF330Q9Y3S2 320 aaPredicted RBP22.78■■□□□ 1.24
CCNC-213ENST00000523541 COL15A1P39059 1388 aa22.77■■□□□ 1.24
CCNC-213ENST00000523541 TM4SF1P30408 202 aa22.77■■□□□ 1.24
CCNC-213ENST00000523541 DCTN1Q14203 1278 aa22.77■■□□□ 1.24
CCNC-213ENST00000523541 USPL1Q5W0Q7 1092 aa22.77■■□□□ 1.24
CCNC-213ENST00000523541 KCNQ3O43525 872 aa22.75■■□□□ 1.23
CCNC-213ENST00000523541 A0A0G2JLW4 131 aa22.74■■□□□ 1.23
CCNC-213ENST00000523541 LMOD3Q0VAK6 560 aa22.74■■□□□ 1.23
CCNC-213ENST00000523541 WDR43Q15061 677 aaKnown RBP eCLIP22.74■■□□□ 1.23
CCNC-213ENST00000523541 BABAM1Q9NWV8 329 aa22.74■■□□□ 1.23
CCNC-213ENST00000523541 BCS1LQ9Y276 419 aa22.73■■□□□ 1.23
CCNC-213ENST00000523541 C10orf71Q711Q0 1435 aa22.73■■□□□ 1.23
CCNC-213ENST00000523541 RIPK4P57078 832 aa22.72■■□□□ 1.23
CCNC-213ENST00000523541 USP16Q9Y5T5 823 aa22.72■■□□□ 1.23
CCNC-213ENST00000523541 PXDNLA1KZ92 1463 aa22.72■■□□□ 1.23
CCNC-213ENST00000523541 TMPOP42166 694 aaKnown RBP22.71■■□□□ 1.23
CCNC-213ENST00000523541 RUNDC1Q96C34 613 aa22.71■■□□□ 1.23
CCNC-213ENST00000523541 N4BP2Q86UW6 1770 aaPredicted RBP22.71■■□□□ 1.23
CCNC-213ENST00000523541 ZNF316A6NFI3 1004 aaPredicted RBP22.7■■□□□ 1.22
CCNC-213ENST00000523541 POLRMTO00411 1230 aaKnown RBP22.7■■□□□ 1.22
CCNC-213ENST00000523541 A1BGP04217 495 aa22.7■■□□□ 1.22
CCNC-213ENST00000523541 DPEP1P16444 411 aa22.7■■□□□ 1.22
CCNC-213ENST00000523541 DDR1Q08345 913 aa22.7■■□□□ 1.22
CCNC-213ENST00000523541 RGL2O15211 777 aa22.69■■□□□ 1.22
CCNC-213ENST00000523541 BCL2L12Q9HB09 334 aa22.69■■□□□ 1.22
CCNC-213ENST00000523541 KIF13BQ9NQT8 1826 aa22.68■■□□□ 1.22
CCNC-213ENST00000523541 NFIXQ14938 502 aa22.68■■□□□ 1.22
CCNC-213ENST00000523541 BICDL1Q6ZP65 573 aa22.68■■□□□ 1.22
CCNC-213ENST00000523541 ADAMTS8Q9UP79 889 aa22.68■■□□□ 1.22
CCNC-213ENST00000523541 EIF4A1P60842 406 aaKnown RBP22.66■■□□□ 1.22
CCNC-213ENST00000523541 CLEC4GQ6UXB4 293 aa22.66■■□□□ 1.22
CCNC-213ENST00000523541 MIS18AQ9NYP9 233 aa22.66■■□□□ 1.22
CCNC-213ENST00000523541 TBC1D2BQ9UPU7 963 aa22.66■■□□□ 1.22
CCNC-213ENST00000523541 GIGYF1O75420 1035 aaPredicted RBP22.65■■□□□ 1.22
CCNC-213ENST00000523541 PIM2Q9P1W9 311 aa22.65■■□□□ 1.22
CCNC-213ENST00000523541 NPHP1O15259 732 aa22.64■■□□□ 1.21
CCNC-213ENST00000523541 SERPINB2P05120 415 aa22.64■■□□□ 1.21
CCNC-213ENST00000523541 ARHGAP27Q6ZUM4 889 aa22.64■■□□□ 1.21
CCNC-213ENST00000523541 PRAMEF22A3QJZ6 481 aa22.63■■□□□ 1.21
CCNC-213ENST00000523541 DZIP3Q86Y13 1208 aaKnown RBP22.63■■□□□ 1.21
CCNC-213ENST00000523541 ZNF526Q8TF50 670 aaPredicted RBP22.63■■□□□ 1.21
CCNC-213ENST00000523541 PDZRN3Q9UPQ7 1066 aa22.63■■□□□ 1.21
CCNC-213ENST00000523541 KIAA1551Q9HCM1 1747 aa22.62■■□□□ 1.21
CCNC-213ENST00000523541 CAMTA2O94983 1202 aa22.62■■□□□ 1.21
CCNC-213ENST00000523541 CHRNA5P30532 468 aa22.62■■□□□ 1.21
CCNC-213ENST00000523541 PIP4K2AP48426 406 aaPredicted RBP22.62■■□□□ 1.21
CCNC-213ENST00000523541 DALRD3Q5D0E6 543 aaKnown RBP22.62■■□□□ 1.21
CCNC-213ENST00000523541 THUMPD2Q9BTF0 503 aaKnown RBP22.62■■□□□ 1.21
CCNC-213ENST00000523541 TSPYL4Q9UJ04 414 aa22.62■■□□□ 1.21
CCNC-213ENST00000523541 ZNF652Q9Y2D9 606 aa22.62■■□□□ 1.21
CCNC-213ENST00000523541 ATP10DQ9P241 1426 aa22.62■■□□□ 1.21
CCNC-213ENST00000523541 DLG5Q8TDM6 1919 aa22.62■■□□□ 1.21
CCNC-213ENST00000523541 KCNA3P22001 575 aa22.61■■□□□ 1.21
CCNC-213ENST00000523541 SETDB2Q96T68 719 aa22.61■■□□□ 1.21
CCNC-213ENST00000523541 CCDC146Q8IYE0 955 aa22.6■■□□□ 1.21
CCNC-213ENST00000523541 ERBB4Q15303 1308 aa22.59■■□□□ 1.21
CCNC-213ENST00000523541 NBPF26B4DH59 902 aa22.59■■□□□ 1.21
CCNC-213ENST00000523541 TBC1D9BQ66K14 1250 aa22.59■■□□□ 1.21
CCNC-213ENST00000523541 NBPF10Q6P3W6 841 aaKnown RBP22.59■■□□□ 1.21
CCNC-213ENST00000523541 NBPF15Q8N660 670 aa22.59■■□□□ 1.21
CCNC-213ENST00000523541 GPBP1L1Q9HC44 474 aaPredicted RBP22.59■■□□□ 1.21
CCNC-213ENST00000523541 TRIM35Q9UPQ4 493 aa22.58■■□□□ 1.21
CCNC-213ENST00000523541 CARMIL3Q8ND23 1372 aa22.58■■□□□ 1.21
CCNC-213ENST00000523541 AFDNP55196 1824 aaKnown RBP22.57■■□□□ 1.2
CCNC-213ENST00000523541 CHL1O00533 1208 aa22.57■■□□□ 1.2
CCNC-213ENST00000523541 NEUROD2Q15784 382 aa22.57■■□□□ 1.2
CCNC-213ENST00000523541 SCN7AQ01118 1682 aa22.57■■□□□ 1.2
CCNC-213ENST00000523541 ERVV-1B6SEH8 477 aa22.56■■□□□ 1.2
CCNC-213ENST00000523541 BRIP1Q9BX63 1249 aa22.56■■□□□ 1.2
CCNC-213ENST00000523541 RRP7AQ9Y3A4 280 aaKnown RBP22.56■■□□□ 1.2
CCNC-213ENST00000523541 KDM3BQ7LBC6 1761 aa22.55■■□□□ 1.2
CCNC-213ENST00000523541 H0YIN7 160 aa22.55■■□□□ 1.2
CCNC-213ENST00000523541 ANP32CO43423 234 aa22.55■■□□□ 1.2
CCNC-213ENST00000523541 PDE6BP35913 854 aa22.55■■□□□ 1.2
CCNC-213ENST00000523541 C1QTNF8P60827 252 aa22.55■■□□□ 1.2
CCNC-213ENST00000523541 CALD1Q05682 793 aaKnown RBP22.55■■□□□ 1.2
CCNC-213ENST00000523541 C2CD5Q86YS7 1000 aa22.55■■□□□ 1.2
CCNC-213ENST00000523541 NRXN2Q9P2S2 1712 aa22.54■■□□□ 1.2
CCNC-213ENST00000523541 BRCA1P38398 1863 aaKnown RBP22.54■■□□□ 1.2
CCNC-213ENST00000523541 CCDC24Q8N4L8 307 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms