RNA–Protein interactions for RNA: ENST00000523323.5

ITGB2-222, Transcript of integrin subunit beta 2, human

TSL 2

Gene ITGB2, Length 2,823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB2-222	ENST00000523323	PPP1R42	Q7Z4L9	355 aa		18.92	■□□□□ 0.62
ITGB2-222	ENST00000523323	MAP4K4	O95819	1239 aa	Predicted RBP	18.91	■□□□□ 0.62
ITGB2-222	ENST00000523323	SDS	P20132	328 aa		18.91	■□□□□ 0.62
ITGB2-222	ENST00000523323	TTC22	Q5TAA0	569 aa		18.91	■□□□□ 0.62
ITGB2-222	ENST00000523323	PDIA6	Q15084	440 aa		18.9	■□□□□ 0.62
ITGB2-222	ENST00000523323	NUTM1	Q86Y26	1132 aa		18.9	■□□□□ 0.62
ITGB2-222	ENST00000523323	CD2BP2	O95400	341 aa	Known RBP	18.9	■□□□□ 0.62
ITGB2-222	ENST00000523323	IFNL2	Q8IZJ0	200 aa		18.9	■□□□□ 0.62
ITGB2-222	ENST00000523323	FOXD4L1	Q9NU39	408 aa		18.9	■□□□□ 0.62
ITGB2-222	ENST00000523323	SPG7	Q9UQ90	795 aa		18.9	■□□□□ 0.62
ITGB2-222	ENST00000523323	BABAM1	Q9NWV8	329 aa		18.89	■□□□□ 0.61
ITGB2-222	ENST00000523323	SRGAP3	O43295	1099 aa		18.89	■□□□□ 0.61
ITGB2-222	ENST00000523323	DBF4	Q9UBU7	674 aa	Predicted RBP	18.89	■□□□□ 0.61
ITGB2-222	ENST00000523323	PA2G4	Q9UQ80	394 aa	Known RBP	18.89	■□□□□ 0.61
ITGB2-222	ENST00000523323	SOS2	Q07890	1332 aa	Predicted RBP	18.89	■□□□□ 0.61
ITGB2-222	ENST00000523323	PTCD1	O75127	700 aa	Known RBP	18.88	■□□□□ 0.61
ITGB2-222	ENST00000523323	GNAI3	P08754	354 aa		18.88	■□□□□ 0.61
ITGB2-222	ENST00000523323	ATP8B2	P98198	1209 aa		18.88	■□□□□ 0.61
ITGB2-222	ENST00000523323	SOS1	Q07889	1333 aa	Predicted RBP	18.88	■□□□□ 0.61
ITGB2-222	ENST00000523323	FRAT2	O75474	233 aa	Predicted RBP	18.88	■□□□□ 0.61
ITGB2-222	ENST00000523323	CRYBG1	Q9Y4K1	1723 aa		18.88	■□□□□ 0.61
ITGB2-222	ENST00000523323	HMMR	O75330	724 aa		18.87	■□□□□ 0.61
ITGB2-222	ENST00000523323	SURF6	O75683	361 aa	Known RBP	18.87	■□□□□ 0.61
ITGB2-222	ENST00000523323	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.87	■□□□□ 0.61
ITGB2-222	ENST00000523323	CABP4	P57796	275 aa		18.87	■□□□□ 0.61
ITGB2-222	ENST00000523323	NFKBIB	Q15653	356 aa		18.87	■□□□□ 0.61
ITGB2-222	ENST00000523323	UNC5CL	Q8IV45	518 aa		18.87	■□□□□ 0.61
ITGB2-222	ENST00000523323	KLHDC4	Q8TBB5	520 aa		18.87	■□□□□ 0.61
ITGB2-222	ENST00000523323	XAGE3	Q8WTP9	111 aa		18.87	■□□□□ 0.61
ITGB2-222	ENST00000523323	PDE1A	P54750	535 aa		18.86	■□□□□ 0.61
ITGB2-222	ENST00000523323	EVA1C	P58658	441 aa		18.86	■□□□□ 0.61
ITGB2-222	ENST00000523323	COPS6	Q7L5N1	327 aa		18.86	■□□□□ 0.61
ITGB2-222	ENST00000523323	KIF2C	Q99661	725 aa		18.85	■□□□□ 0.61
ITGB2-222	ENST00000523323	C5	P01031	1676 aa		18.85	■□□□□ 0.61
ITGB2-222	ENST00000523323	HEG1	Q9ULI3	1381 aa		18.85	■□□□□ 0.61
ITGB2-222	ENST00000523323	WDR17	Q8IZU2	1322 aa		18.84	■□□□□ 0.61
ITGB2-222	ENST00000523323	ATP5J2-PTCD1	G3V325	749 aa		18.84	■□□□□ 0.61
ITGB2-222	ENST00000523323	LRRCC1	Q9C099	1032 aa		18.84	■□□□□ 0.61
ITGB2-222	ENST00000523323	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.84	■□□□□ 0.61
ITGB2-222	ENST00000523323	CACNA1F	O60840	1977 aa		18.84	■□□□□ 0.61
ITGB2-222	ENST00000523323	CDC45	O75419	566 aa		18.84	■□□□□ 0.61
ITGB2-222	ENST00000523323	TTC5	Q8N0Z6	440 aa		18.84	■□□□□ 0.61
ITGB2-222	ENST00000523323	NCOA3	Q9Y6Q9	1424 aa		18.84	■□□□□ 0.61
ITGB2-222	ENST00000523323	BTG4	Q9NY30	223 aa		18.83	■□□□□ 0.61
ITGB2-222	ENST00000523323	SIPA1L3	O60292	1781 aa	Predicted RBP	18.83	■□□□□ 0.61
ITGB2-222	ENST00000523323	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.83	■□□□□ 0.6
ITGB2-222	ENST00000523323	IGKV5-2	P06315	115 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	KSR2	Q6VAB6	950 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	RIC3	Q7Z5B4	369 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	ZCRB1	Q8TBF4	217 aa	Known RBP	18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	RILPL2	Q969X0	211 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	DCAF5	Q96JK2	942 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	COL5A2	P05997	1499 aa	Predicted RBP	18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	SCN11A	Q9UI33	1791 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	CPD	O75976	1380 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	HOXB7	P09629	217 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	KAZALD1	Q96I82	304 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	MYD88	Q99836	296 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	SIL1	Q9H173	461 aa		18.82	■□□□□ 0.6
ITGB2-222	ENST00000523323	SUCLG2	Q96I99	432 aa		18.81	■□□□□ 0.6
ITGB2-222	ENST00000523323	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
ITGB2-222	ENST00000523323	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.81	■□□□□ 0.6
ITGB2-222	ENST00000523323	TRIM6-TRIM34	B2RNG4	842 aa		18.81	■□□□□ 0.6
ITGB2-222	ENST00000523323	IL25	Q9H293	177 aa		18.81	■□□□□ 0.6
ITGB2-222	ENST00000523323	A1BG	P04217	495 aa		18.8	■□□□□ 0.6
ITGB2-222	ENST00000523323	RBM10	P98175	930 aa	Known RBP	18.8	■□□□□ 0.6
ITGB2-222	ENST00000523323	BECN1	Q14457	450 aa		18.8	■□□□□ 0.6
ITGB2-222	ENST00000523323	EPHA10	Q5JZY3	1008 aa		18.8	■□□□□ 0.6
ITGB2-222	ENST00000523323		A0A0G2JS52	829 aa		18.8	■□□□□ 0.6
ITGB2-222	ENST00000523323	ADAMTS2	O95450	1211 aa		18.8	■□□□□ 0.6
ITGB2-222	ENST00000523323	MX1	P20591	662 aa		18.8	■□□□□ 0.6
ITGB2-222	ENST00000523323	SSH3	Q8TE77	659 aa		18.8	■□□□□ 0.6
ITGB2-222	ENST00000523323	OS9	Q13438	667 aa	Predicted RBP	18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	FAM43A	Q8N2R8	423 aa		18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	BICC1	Q9H694	974 aa	Known RBP	18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	PDE4C	Q08493	712 aa		18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	GSE1	Q14687	1217 aa		18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	OVOS2	A0A0G2JMS6	1433 aa		18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	NBPF26	B4DH59	902 aa		18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	IL2RB	P14784	551 aa		18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	FGD1	P98174	961 aa		18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	NBPF14	Q5TI25	921 aa		18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	NBPF10	Q6P3W6	841 aa	Known RBP	18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	NBPF15	Q8N660	670 aa		18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	HYPK	Q9NX55	129 aa		18.78	■□□□□ 0.6
ITGB2-222	ENST00000523323	RHPN1	Q8TCX5	695 aa		18.77	■□□□□ 0.6
ITGB2-222	ENST00000523323	SALL3	Q9BXA9	1300 aa		18.77	■□□□□ 0.6
ITGB2-222	ENST00000523323	SNRPA1	P09661	255 aa	Known RBP	18.77	■□□□□ 0.59
ITGB2-222	ENST00000523323	RBM25	P49756	843 aa	Known RBP	18.77	■□□□□ 0.59
ITGB2-222	ENST00000523323	TTLL7	Q6ZT98	887 aa		18.77	■□□□□ 0.59
ITGB2-222	ENST00000523323	ANTXR1	Q9H6X2	564 aa		18.77	■□□□□ 0.59
ITGB2-222	ENST00000523323	POLA2	Q14181	598 aa		18.76	■□□□□ 0.59
ITGB2-222	ENST00000523323	LRP10	Q7Z4F1	713 aa		18.76	■□□□□ 0.59
ITGB2-222	ENST00000523323	FMNL2	Q96PY5	1086 aa		18.76	■□□□□ 0.59
ITGB2-222	ENST00000523323	ARX	Q96QS3	562 aa		18.76	■□□□□ 0.59
ITGB2-222	ENST00000523323	PIP4K2B	P78356	416 aa		18.76	■□□□□ 0.59
ITGB2-222	ENST00000523323	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
ITGB2-222	ENST00000523323	CCDC9	Q9Y3X0	531 aa	Known RBP	18.76	■□□□□ 0.59
ITGB2-222	ENST00000523323	PXDNL	A1KZ92	1463 aa		18.75	■□□□□ 0.59
ITGB2-222	ENST00000523323	GRM8	O00222	908 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms