RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
PCM1-218ENST00000523055 USP42Q9H9J4 1324 aaKnown RBP20.34■□□□□ 0.85
PCM1-218ENST00000523055 ADAMTS7Q9UKP4 1686 aa20.33■□□□□ 0.85
PCM1-218ENST00000523055 RASSF7Q02833 373 aa20.33■□□□□ 0.84
PCM1-218ENST00000523055 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
PCM1-218ENST00000523055 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
PCM1-218ENST00000523055 PPP2R1AP30153 589 aa20.31■□□□□ 0.84
PCM1-218ENST00000523055 TM4SF1P30408 202 aa20.31■□□□□ 0.84
PCM1-218ENST00000523055 CRKLP46109 303 aaKnown RBP20.31■□□□□ 0.84
PCM1-218ENST00000523055 ZC3H4Q9UPT8 1303 aaKnown RBP20.31■□□□□ 0.84
PCM1-218ENST00000523055 GLTPD2A6NH11 291 aa20.29■□□□□ 0.84
PCM1-218ENST00000523055 AMOTQ4VCS5 1084 aa20.29■□□□□ 0.84
PCM1-218ENST00000523055 POTECB2RU33 542 aa20.28■□□□□ 0.84
PCM1-218ENST00000523055 U2SURPO15042 1029 aaKnown RBP20.28■□□□□ 0.84
PCM1-218ENST00000523055 TJP1Q07157 1748 aa20.28■□□□□ 0.84
PCM1-218ENST00000523055 PTCD1O75127 700 aaKnown RBP20.27■□□□□ 0.84
PCM1-218ENST00000523055 VEGFAP15692 232 aaPredicted RBP20.27■□□□□ 0.84
PCM1-218ENST00000523055 INTS5Q6P9B9 1019 aaKnown RBP20.27■□□□□ 0.84
PCM1-218ENST00000523055 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.83
PCM1-218ENST00000523055 HSP90AB1P08238 724 aaKnown RBP20.26■□□□□ 0.83
PCM1-218ENST00000523055 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
PCM1-218ENST00000523055 LMNB1P20700 586 aa20.25■□□□□ 0.83
PCM1-218ENST00000523055 CABP4P57796 275 aa20.25■□□□□ 0.83
PCM1-218ENST00000523055 MTHFSDQ2M296 383 aaKnown RBP20.24■□□□□ 0.83
PCM1-218ENST00000523055 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
PCM1-218ENST00000523055 NFKBIEO00221 500 aa20.23■□□□□ 0.83
PCM1-218ENST00000523055 CFAP53Q96M91 514 aa20.23■□□□□ 0.83
PCM1-218ENST00000523055 NRXN2Q9P2S2 1712 aa20.23■□□□□ 0.83
PCM1-218ENST00000523055 USPL1Q5W0Q7 1092 aa20.22■□□□□ 0.83
PCM1-218ENST00000523055 NFATC2IPQ8NCF5 419 aa20.22■□□□□ 0.83
PCM1-218ENST00000523055 SIPA1L3O60292 1781 aaPredicted RBP20.22■□□□□ 0.83
PCM1-218ENST00000523055 MRC1P22897 1456 aa20.22■□□□□ 0.83
PCM1-218ENST00000523055 DLEC1Q9Y238 1755 aa20.21■□□□□ 0.83
PCM1-218ENST00000523055 NFIXQ14938 502 aa20.21■□□□□ 0.83
PCM1-218ENST00000523055 AKAP4Q5JQC9 854 aa20.21■□□□□ 0.83
PCM1-218ENST00000523055 CCDC88AQ3V6T2 1871 aa20.21■□□□□ 0.83
PCM1-218ENST00000523055 TIAM2Q8IVF5 1701 aa20.21■□□□□ 0.83
PCM1-218ENST00000523055 DLG5Q8TDM6 1919 aa20.21■□□□□ 0.83
PCM1-218ENST00000523055 LGR6Q9HBX8 967 aa20.2■□□□□ 0.82
PCM1-218ENST00000523055 SOS1Q07889 1333 aaPredicted RBP20.2■□□□□ 0.82
PCM1-218ENST00000523055 BCL2L12Q9HB09 334 aa20.19■□□□□ 0.82
PCM1-218ENST00000523055 RSPH6AQ9H0K4 717 aa20.19■□□□□ 0.82
PCM1-218ENST00000523055 CARMIL3Q8ND23 1372 aa20.18■□□□□ 0.82
PCM1-218ENST00000523055 PRKAR2BP31323 418 aa20.18■□□□□ 0.82
PCM1-218ENST00000523055 DNAJC10Q8IXB1 793 aa20.18■□□□□ 0.82
PCM1-218ENST00000523055 UBR2Q8IWV8 1755 aa20.17■□□□□ 0.82
PCM1-218ENST00000523055 U2AF1L5P0DN76 240 aaPredicted RBP20.17■□□□□ 0.82
PCM1-218ENST00000523055 ZEB1P37275 1124 aaPredicted RBP20.17■□□□□ 0.82
PCM1-218ENST00000523055 U2AF1Q01081 240 aaKnown RBP eCLIP20.17■□□□□ 0.824e-7■■■■□ 24.2
PCM1-218ENST00000523055 TTLL6Q8N841 843 aa20.17■□□□□ 0.82
PCM1-218ENST00000523055 PHACTR3Q96KR7 559 aa20.17■□□□□ 0.82
PCM1-218ENST00000523055 RNMTO43148 476 aaKnown RBP20.16■□□□□ 0.82
PCM1-218ENST00000523055 ZPR1O75312 459 aa20.16■□□□□ 0.82
PCM1-218ENST00000523055 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
PCM1-218ENST00000523055 POTEJP0CG39 1038 aa20.16■□□□□ 0.82
PCM1-218ENST00000523055 NARFQ9UHQ1 456 aa20.16■□□□□ 0.82
PCM1-218ENST00000523055 FOXN1O15353 648 aa20.15■□□□□ 0.82
PCM1-218ENST00000523055 SLC34A2O95436 690 aa20.15■□□□□ 0.82
PCM1-218ENST00000523055 SERPINB2P05120 415 aa20.15■□□□□ 0.82
PCM1-218ENST00000523055 CREBZFQ9NS37 354 aa20.15■□□□□ 0.82
PCM1-218ENST00000523055 MKRN1Q9UHC7 482 aaKnown RBP20.15■□□□□ 0.82
PCM1-218ENST00000523055 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
PCM1-218ENST00000523055 CYP19A1P11511 503 aaPredicted RBP20.14■□□□□ 0.81
PCM1-218ENST00000523055 SLC52A2Q9HAB3 445 aa20.14■□□□□ 0.81
PCM1-218ENST00000523055 C2CD5Q86YS7 1000 aa20.13■□□□□ 0.81
PCM1-218ENST00000523055 ZBTB1Q9Y2K1 713 aa20.13■□□□□ 0.81
PCM1-218ENST00000523055 COL15A1P39059 1388 aa20.13■□□□□ 0.81
PCM1-218ENST00000523055 DICER1Q9UPY3 1922 aaKnown RBP20.12■□□□□ 0.81
PCM1-218ENST00000523055 CHADLQ6NUI6 762 aa20.11■□□□□ 0.81
PCM1-218ENST00000523055 GAS2L2Q8NHY3 880 aa20.11■□□□□ 0.81
PCM1-218ENST00000523055 SLC39A6Q13433 755 aa20.1■□□□□ 0.81
PCM1-218ENST00000523055 IL17REQ8NFR9 667 aa20.1■□□□□ 0.81
PCM1-218ENST00000523055 PRDM10Q9NQV6 1147 aa20.1■□□□□ 0.81
PCM1-218ENST00000523055 CNTNAP1P78357 1384 aa20.1■□□□□ 0.81
PCM1-218ENST00000523055 FER1L6Q2WGJ9 1857 aa20.1■□□□□ 0.81
PCM1-218ENST00000523055 ANKRD31Q8N7Z5 1873 aa20.1■□□□□ 0.81
PCM1-218ENST00000523055 GNAT3A8MTJ3 354 aa20.1■□□□□ 0.81
PCM1-218ENST00000523055 RALBP1Q15311 655 aa20.1■□□□□ 0.81
PCM1-218ENST00000523055 DPY19L2Q6NUT2 758 aa20.1■□□□□ 0.81
PCM1-218ENST00000523055 H0YIN7 160 aa20.09■□□□□ 0.81
PCM1-218ENST00000523055 PASKQ96RG2 1323 aa20.09■□□□□ 0.81
PCM1-218ENST00000523055 ERFEQ4G0M1 354 aa20.08■□□□□ 0.8
PCM1-218ENST00000523055 MYBBP1AQ9BQG0 1328 aaKnown RBP20.07■□□□□ 0.8
PCM1-218ENST00000523055 C21orf2O43822 256 aa20.07■□□□□ 0.8
PCM1-218ENST00000523055 DDNO94850 711 aaPredicted RBP20.07■□□□□ 0.8
PCM1-218ENST00000523055 COL11A2P13942 1736 aaPredicted RBP20.06■□□□□ 0.8
PCM1-218ENST00000523055 CEMIPQ8WUJ3 1361 aa20.06■□□□□ 0.8
PCM1-218ENST00000523055 LTBP3Q9NS15 1303 aa20.05■□□□□ 0.8
PCM1-218ENST00000523055 VEGFBP49765 207 aa20.04■□□□□ 0.8
PCM1-218ENST00000523055 ZNF219Q9P2Y4 722 aaPredicted RBP20.04■□□□□ 0.8
PCM1-218ENST00000523055 EIF5P55010 431 aaKnown RBP20.03■□□□□ 0.8
PCM1-218ENST00000523055 TEFQ10587 303 aa20.03■□□□□ 0.8
PCM1-218ENST00000523055 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
PCM1-218ENST00000523055 BICDL1Q6ZP65 573 aa20.03■□□□□ 0.8
PCM1-218ENST00000523055 MCM10Q7L590 875 aa20.03■□□□□ 0.8
PCM1-218ENST00000523055 ZNF622Q969S3 477 aaKnown RBP eCLIP20.03■□□□□ 0.85e-7■■■□□ 16.1
PCM1-218ENST00000523055 PLEKHF1Q96S99 279 aa20.03■□□□□ 0.8
PCM1-218ENST00000523055 WBP1LQ9NX94 342 aa20.03■□□□□ 0.8
PCM1-218ENST00000523055 CTCFP49711 727 aaPredicted RBP20.02■□□□□ 0.8
PCM1-218ENST00000523055 TBC1D9BQ66K14 1250 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms