RNA–Protein interactions for RNA: ENST00000522642.1

GINS4-208, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 390 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-208ENST00000522642 CYP4F22Q6NT55 531 aa10.14□□□□□ -0.79
GINS4-208ENST00000522642 C2CD5Q86YS7 1000 aa10.14□□□□□ -0.79
GINS4-208ENST00000522642 USHBP1Q8N6Y0 703 aa10.14□□□□□ -0.79
GINS4-208ENST00000522642 DDX21Q9NR30 783 aaKnown RBP eCLIP10.14□□□□□ -0.79
GINS4-208ENST00000522642 ATG3Q9NT62 314 aa10.14□□□□□ -0.79
GINS4-208ENST00000522642 EDC4Q6P2E9 1401 aaKnown RBP10.14□□□□□ -0.79
GINS4-208ENST00000522642 RTL1A6NKG5 1358 aa10.14□□□□□ -0.79
GINS4-208ENST00000522642 SBNO2Q9Y2G9 1366 aa10.14□□□□□ -0.79
GINS4-208ENST00000522642 TIAM2Q8IVF5 1701 aa10.13□□□□□ -0.79
GINS4-208ENST00000522642 USP42Q9H9J4 1324 aaKnown RBP10.13□□□□□ -0.79
GINS4-208ENST00000522642 TM4SF1P30408 202 aa10.13□□□□□ -0.79
GINS4-208ENST00000522642 BRPF1P55201 1214 aaPredicted RBP10.13□□□□□ -0.79
GINS4-208ENST00000522642 MAP1SQ66K74 1059 aaPredicted RBP10.12□□□□□ -0.79
GINS4-208ENST00000522642 ZNF622Q969S3 477 aaKnown RBP eCLIP10.12□□□□□ -0.79
GINS4-208ENST00000522642 C21orf2O43822 256 aa10.11□□□□□ -0.79
GINS4-208ENST00000522642 IFNL2Q8IZJ0 200 aa10.11□□□□□ -0.79
GINS4-208ENST00000522642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.79
GINS4-208ENST00000522642 MAP2P11137 1827 aaKnown RBP10.1□□□□□ -0.79
GINS4-208ENST00000522642 SCN4AP35499 1836 aa10.1□□□□□ -0.79
GINS4-208ENST00000522642 PDE6BP35913 854 aa10.1□□□□□ -0.79
GINS4-208ENST00000522642 SRP68Q9UHB9 627 aaKnown RBP10.1□□□□□ -0.79
GINS4-208ENST00000522642 TLL2Q9Y6L7 1015 aa10.1□□□□□ -0.79
GINS4-208ENST00000522642 MON2Q7Z3U7 1717 aa10.1□□□□□ -0.79
GINS4-208ENST00000522642 ITGB4P16144 1822 aa10.1□□□□□ -0.79
GINS4-208ENST00000522642 CCDC88AQ3V6T2 1871 aa10.09□□□□□ -0.79
GINS4-208ENST00000522642 SERPINB2P05120 415 aa10.09□□□□□ -0.79
GINS4-208ENST00000522642 CNKSR1Q969H4 720 aa10.09□□□□□ -0.79
GINS4-208ENST00000522642 HHIPL1Q96JK4 782 aa10.09□□□□□ -0.79
GINS4-208ENST00000522642 AOC2O75106 756 aa10.08□□□□□ -0.8
GINS4-208ENST00000522642 LMOD1P29536 600 aaPredicted RBP10.08□□□□□ -0.8
GINS4-208ENST00000522642 CRKLP46109 303 aaKnown RBP10.08□□□□□ -0.8
GINS4-208ENST00000522642 CASP8AP2Q9UKL3 1982 aa10.07□□□□□ -0.8
GINS4-208ENST00000522642 KDRP35968 1356 aa10.07□□□□□ -0.8
GINS4-208ENST00000522642 ERVV-2B6SEH9 535 aa10.07□□□□□ -0.8
GINS4-208ENST00000522642 HSP90AB1P08238 724 aaKnown RBP10.07□□□□□ -0.8
GINS4-208ENST00000522642 NOGQ13253 232 aa10.07□□□□□ -0.8
GINS4-208ENST00000522642 PKN2Q16513 984 aaKnown RBP10.07□□□□□ -0.8
GINS4-208ENST00000522642 AKAP4Q5JQC9 854 aa10.07□□□□□ -0.8
GINS4-208ENST00000522642 USPL1Q5W0Q7 1092 aa10.07□□□□□ -0.8
GINS4-208ENST00000522642 SLC17A8Q8NDX2 589 aa10.07□□□□□ -0.8
GINS4-208ENST00000522642 SLC12A5Q9H2X9 1139 aa10.07□□□□□ -0.8
GINS4-208ENST00000522642 THSD7BQ9C0I4 1608 aa10.07□□□□□ -0.8
GINS4-208ENST00000522642 INSRP06213 1382 aa10.06□□□□□ -0.8
GINS4-208ENST00000522642 NFIXQ14938 502 aa10.06□□□□□ -0.8
GINS4-208ENST00000522642 BICDL1Q6ZP65 573 aa10.06□□□□□ -0.8
GINS4-208ENST00000522642 DICER1Q9UPY3 1922 aaKnown RBP10.05□□□□□ -0.8
GINS4-208ENST00000522642 PHKG2P15735 406 aa10.05□□□□□ -0.8
GINS4-208ENST00000522642 RRS1Q15050 365 aaKnown RBP10.05□□□□□ -0.8
GINS4-208ENST00000522642 CIAPIN1Q6FI81 312 aa10.05□□□□□ -0.8
GINS4-208ENST00000522642 CTU1Q7Z7A3 348 aaKnown RBP10.05□□□□□ -0.8
GINS4-208ENST00000522642 GPC2Q8N158 579 aa10.05□□□□□ -0.8
GINS4-208ENST00000522642 SLC4A9Q96Q91 983 aa10.05□□□□□ -0.8
GINS4-208ENST00000522642 BRIP1Q9BX63 1249 aa10.05□□□□□ -0.8
GINS4-208ENST00000522642 SAGE1Q9NXZ1 904 aa10.05□□□□□ -0.8
GINS4-208ENST00000522642 KIF24Q5T7B8 1368 aa10.04□□□□□ -0.8
GINS4-208ENST00000522642 RGPD2P0DJD1 1756 aa10.04□□□□□ -0.8
GINS4-208ENST00000522642 NPHP1O15259 732 aa10.04□□□□□ -0.8
GINS4-208ENST00000522642 FXR1P51114 621 aaKnown RBP eCLIP10.04□□□□□ -0.8
GINS4-208ENST00000522642 CABP4P57796 275 aa10.04□□□□□ -0.8
GINS4-208ENST00000522642 SAPCD2Q86UD0 394 aa10.04□□□□□ -0.8
GINS4-208ENST00000522642 NARFQ9UHQ1 456 aa10.04□□□□□ -0.8
GINS4-208ENST00000522642 RNF123Q5XPI4 1314 aa10.04□□□□□ -0.8
GINS4-208ENST00000522642 WASHC2AQ641Q2 1341 aa10.04□□□□□ -0.8
GINS4-208ENST00000522642 ZNF831Q5JPB2 1677 aa10.03□□□□□ -0.8
GINS4-208ENST00000522642 PTCD1O75127 700 aaKnown RBP10.03□□□□□ -0.8
GINS4-208ENST00000522642 FBLN1P23142 703 aa10.03□□□□□ -0.8
GINS4-208ENST00000522642 CCDC93Q567U6 631 aa10.03□□□□□ -0.8
GINS4-208ENST00000522642 HSP90AB2PQ58FF8 381 aa10.03□□□□□ -0.8
GINS4-208ENST00000522642 CST9Q5W186 159 aa10.03□□□□□ -0.8
GINS4-208ENST00000522642 USP50Q70EL3 339 aaPredicted RBP10.03□□□□□ -0.8
GINS4-208ENST00000522642 JDP2Q8WYK2 163 aa10.03□□□□□ -0.8
GINS4-208ENST00000522642 PUS7Q96PZ0 661 aaKnown RBP10.03□□□□□ -0.8
GINS4-208ENST00000522642 A0A1W2PP64 1363 aa10.02□□□□□ -0.8
GINS4-208ENST00000522642 FLT4P35916 1363 aa10.02□□□□□ -0.8
GINS4-208ENST00000522642 EIF6P56537 245 aaKnown RBP10.02□□□□□ -0.81
GINS4-208ENST00000522642 STYK1Q6J9G0 422 aa10.02□□□□□ -0.81
GINS4-208ENST00000522642 LTBP1Q14766 1721 aa10.02□□□□□ -0.81
GINS4-208ENST00000522642 CELF2O95319 508 aaKnown RBP10.01□□□□□ -0.81
GINS4-208ENST00000522642 FKBP4Q02790 459 aaKnown RBP eCLIP10.01□□□□□ -0.81
GINS4-208ENST00000522642 RTKN2Q8IZC4 609 aa10.01□□□□□ -0.81
GINS4-208ENST00000522642 HPS5Q9UPZ3 1129 aa10.01□□□□□ -0.81
GINS4-208ENST00000522642 ZNF541Q9H0D2 1346 aa10.01□□□□□ -0.81
GINS4-208ENST00000522642 ROCK2O75116 1388 aaKnown RBP10.01□□□□□ -0.81
GINS4-208ENST00000522642 PRPF40BQ6NWY9 871 aaKnown RBP10□□□□□ -0.81
GINS4-208ENST00000522642 MASTLQ96GX5 879 aa10□□□□□ -0.81
GINS4-208ENST00000522642 HDAC9Q9UKV0 1011 aa10□□□□□ -0.81
GINS4-208ENST00000522642 DLEC1Q9Y238 1755 aa10□□□□□ -0.81
GINS4-208ENST00000522642 FER1L6Q2WGJ9 1857 aa10□□□□□ -0.81
GINS4-208ENST00000522642 TONSLQ96HA7 1378 aa10□□□□□ -0.81
GINS4-208ENST00000522642 RAB3GAP2Q9H2M9 1393 aa10□□□□□ -0.81
GINS4-208ENST00000522642 ADAMTSL1Q8N6G6 1762 aa9.99□□□□□ -0.81
GINS4-208ENST00000522642 A0A087WZG4 1122 aa9.99□□□□□ -0.81
GINS4-208ENST00000522642 FZD9O00144 591 aa9.99□□□□□ -0.81
GINS4-208ENST00000522642 INTS5Q6P9B9 1019 aaKnown RBP9.99□□□□□ -0.81
GINS4-208ENST00000522642 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
GINS4-208ENST00000522642 CCDC102AQ96A19 550 aa9.99□□□□□ -0.81
GINS4-208ENST00000522642 GJA3Q9Y6H8 435 aa9.99□□□□□ -0.81
GINS4-208ENST00000522642 TRAF5O00463 557 aa9.98□□□□□ -0.81
GINS4-208ENST00000522642 SLC24A1O60721 1099 aa9.98□□□□□ -0.81
GINS4-208ENST00000522642 IARSP41252 1262 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms