RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 CDK13Q14004 1512 aaKnown RBP10.58□□□□□ -0.72
SPIDR-215ENST00000521798 SCAMP3O14828 347 aaKnown RBP10.57□□□□□ -0.72
SPIDR-215ENST00000521798 TREHO43280 583 aa10.57□□□□□ -0.72
SPIDR-215ENST00000521798 NDUFB5O43674 189 aa10.57□□□□□ -0.72
SPIDR-215ENST00000521798 ZPR1O75312 459 aa10.57□□□□□ -0.72
SPIDR-215ENST00000521798 FMR1Q06787 632 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPIDR-215ENST00000521798 MARVELD3Q96A59 401 aa10.57□□□□□ -0.72
SPIDR-215ENST00000521798 HECW1Q76N89 1606 aa10.57□□□□□ -0.72
SPIDR-215ENST00000521798 CASKIN1Q8WXD9 1431 aa10.57□□□□□ -0.72
SPIDR-215ENST00000521798 MAP3K4Q9Y6R4 1608 aa10.56□□□□□ -0.72
SPIDR-215ENST00000521798 ST18O60284 1047 aa10.56□□□□□ -0.72
SPIDR-215ENST00000521798 CDK11BP21127 795 aaKnown RBP10.56□□□□□ -0.72
SPIDR-215ENST00000521798 CDK11AQ9UQ88 783 aaPredicted RBP10.56□□□□□ -0.72
SPIDR-215ENST00000521798 PPRC1Q5VV67 1664 aaKnown RBP10.56□□□□□ -0.72
SPIDR-215ENST00000521798 PCF11O94913 1555 aaKnown RBP10.56□□□□□ -0.72
SPIDR-215ENST00000521798 TMEM229AB2RXF0 380 aa10.55□□□□□ -0.72
SPIDR-215ENST00000521798 MPSTP25325 297 aa10.55□□□□□ -0.72
SPIDR-215ENST00000521798 HDLBPQ00341 1268 aaKnown RBP10.55□□□□□ -0.72
SPIDR-215ENST00000521798 GAS2L2Q8NHY3 880 aa10.55□□□□□ -0.72
SPIDR-215ENST00000521798 TSPOAP1O95153 1857 aa10.55□□□□□ -0.72
SPIDR-215ENST00000521798 PLEKHD1A6NEE1 506 aa10.54□□□□□ -0.72
SPIDR-215ENST00000521798 OTUD5Q96G74 571 aa10.54□□□□□ -0.72
SPIDR-215ENST00000521798 CITED4Q96RK1 184 aa10.54□□□□□ -0.72
SPIDR-215ENST00000521798 SLC6A16Q9GZN6 736 aa10.54□□□□□ -0.72
SPIDR-215ENST00000521798 FYCO1Q9BQS8 1478 aa10.54□□□□□ -0.72
SPIDR-215ENST00000521798 CD109Q6YHK3 1445 aa10.53□□□□□ -0.72
SPIDR-215ENST00000521798 FGD1P98174 961 aa10.53□□□□□ -0.72
SPIDR-215ENST00000521798 LDLRAD1Q5T700 205 aa10.53□□□□□ -0.72
SPIDR-215ENST00000521798 SCG3Q8WXD2 468 aaKnown RBP10.53□□□□□ -0.72
SPIDR-215ENST00000521798 BRPF3Q9ULD4 1205 aa10.53□□□□□ -0.72
SPIDR-215ENST00000521798 LRRIQ1Q96JM4 1722 aa10.53□□□□□ -0.72
SPIDR-215ENST00000521798 WASLO00401 505 aaPredicted RBP10.52□□□□□ -0.73
SPIDR-215ENST00000521798 CANXP27824 592 aaKnown RBP10.52□□□□□ -0.73
SPIDR-215ENST00000521798 SCTRP47872 440 aa10.52□□□□□ -0.73
SPIDR-215ENST00000521798 KCTD15Q96SI1 283 aaPredicted RBP10.52□□□□□ -0.73
SPIDR-215ENST00000521798 CFAP43Q8NDM7 1665 aa10.52□□□□□ -0.73
SPIDR-215ENST00000521798 MAGI3Q5TCQ9 1506 aa10.52□□□□□ -0.73
SPIDR-215ENST00000521798 ABCA9Q8IUA7 1624 aa10.51□□□□□ -0.73
SPIDR-215ENST00000521798 BACH1O14867 736 aa10.51□□□□□ -0.73
SPIDR-215ENST00000521798 SCNN1DP51172 638 aa10.51□□□□□ -0.73
SPIDR-215ENST00000521798 DSC3Q14574 896 aa10.51□□□□□ -0.73
SPIDR-215ENST00000521798 C16orf46Q6P387 395 aa10.51□□□□□ -0.73
SPIDR-215ENST00000521798 VTI1AQ96AJ9 217 aa10.51□□□□□ -0.73
SPIDR-215ENST00000521798 HS3ST6Q96QI5 342 aa10.51□□□□□ -0.73
SPIDR-215ENST00000521798 ATAD2Q6PL18 1390 aa10.51□□□□□ -0.73
SPIDR-215ENST00000521798 CCDC18Q5T9S5 1454 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 TEX14Q8IWB6 1497 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 POTEB3A0JP26 581 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 PRPF40AO75400 957 aaKnown RBP10.5□□□□□ -0.73
SPIDR-215ENST00000521798 ITGAEP38570 1179 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 EPHA4P54764 986 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 RAB15P59190 212 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 ERVK-9P63128 1117 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 POTEBQ6S5H4 581 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 TNS4Q8IZW8 715 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 DMRTB1Q96MA1 342 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 PRKD2Q9BZL6 878 aa10.5□□□□□ -0.73
SPIDR-215ENST00000521798 PPP1R1BQ9UD71 204 aaPredicted RBP10.5□□□□□ -0.73
SPIDR-215ENST00000521798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.49□□□□□ -0.73
SPIDR-215ENST00000521798 LDHBP07195 334 aaKnown RBP10.49□□□□□ -0.73
SPIDR-215ENST00000521798 GDF10P55107 478 aa10.49□□□□□ -0.73
SPIDR-215ENST00000521798 SH3BP2P78314 561 aa10.49□□□□□ -0.73
SPIDR-215ENST00000521798 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-215ENST00000521798 RAD51AP2Q09MP3 1159 aa10.49□□□□□ -0.73
SPIDR-215ENST00000521798 INTS6LQ5JSJ4 861 aaKnown RBP10.49□□□□□ -0.73
SPIDR-215ENST00000521798 ALKBH2Q6NS38 261 aa10.49□□□□□ -0.73
SPIDR-215ENST00000521798 PIK3R5Q8WYR1 880 aa10.49□□□□□ -0.73
SPIDR-215ENST00000521798 MTRQ99707 1265 aa10.49□□□□□ -0.73
SPIDR-215ENST00000521798 SAP130Q9H0E3 1048 aa10.49□□□□□ -0.73
SPIDR-215ENST00000521798 TROQ12816 1431 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-215ENST00000521798 COL17A1Q9UMD9 1497 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-215ENST00000521798 KDM6BO15054 1643 aa10.48□□□□□ -0.73
SPIDR-215ENST00000521798 ERVH48-1M5A8F1 160 aa10.48□□□□□ -0.73
SPIDR-215ENST00000521798 FZD6O60353 706 aa10.48□□□□□ -0.73
SPIDR-215ENST00000521798 EIF1AXP47813 144 aaKnown RBP10.48□□□□□ -0.73
SPIDR-215ENST00000521798 C9orf131Q5VYM1 1079 aa10.48□□□□□ -0.73
SPIDR-215ENST00000521798 SPATA32Q96LK8 384 aa10.48□□□□□ -0.73
SPIDR-215ENST00000521798 TSPAN10Q9H1Z9 355 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-215ENST00000521798 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.48□□□□□ -0.73
SPIDR-215ENST00000521798 PARP2Q9UGN5 583 aa10.48□□□□□ -0.73
SPIDR-215ENST00000521798 MAP4K5Q9Y4K4 846 aa10.48□□□□□ -0.73
SPIDR-215ENST00000521798 TTC37Q6PGP7 1564 aa10.48□□□□□ -0.73
SPIDR-215ENST00000521798 IGHA2P01877 340 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 MAPK8P45983 427 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 PLCB3Q01970 1234 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 EHHADHQ08426 723 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 CC2D2BQ6DHV5 1058 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 TMC4Q7Z404 712 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 TMC1Q8TDI8 760 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 FAM129BQ96TA1 746 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 ESF1Q9H501 851 aaKnown RBP10.47□□□□□ -0.73
SPIDR-215ENST00000521798 MRS2Q9HD23 443 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 FCF1Q9Y324 198 aaKnown RBP10.47□□□□□ -0.73
SPIDR-215ENST00000521798 VPS8Q8N3P4 1428 aa10.47□□□□□ -0.73
SPIDR-215ENST00000521798 SMARCA5O60264 1052 aaPredicted RBP10.46□□□□□ -0.73
SPIDR-215ENST00000521798 THSD4Q6ZMP0 1018 aa10.46□□□□□ -0.73
SPIDR-215ENST00000521798 METTL16Q86W50 562 aaKnown RBP10.46□□□□□ -0.73
SPIDR-215ENST00000521798 TMEM87AQ8NBN3 555 aa10.46□□□□□ -0.73
SPIDR-215ENST00000521798 ALKBH8Q96BT7 664 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms