RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 TAF7Q15545 349 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC9-211ENST00000521700 GPR162Q16538 588 aa23.67■■□□□ 1.38
TRAPPC9-211ENST00000521700 CANXP27824 592 aaKnown RBP23.66■■□□□ 1.38
TRAPPC9-211ENST00000521700 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
TRAPPC9-211ENST00000521700 FKBP8Q14318 412 aa23.65■■□□□ 1.38
TRAPPC9-211ENST00000521700 PELP1Q8IZL8 1130 aaKnown RBP23.64■■□□□ 1.37
TRAPPC9-211ENST00000521700 MIS18AQ9NYP9 233 aa23.64■■□□□ 1.37
TRAPPC9-211ENST00000521700 ZPR1O75312 459 aa23.63■■□□□ 1.37
TRAPPC9-211ENST00000521700 EIF5P55010 431 aaKnown RBP23.63■■□□□ 1.37
TRAPPC9-211ENST00000521700 USPL1Q5W0Q7 1092 aa23.63■■□□□ 1.37
TRAPPC9-211ENST00000521700 THUMPD2Q9BTF0 503 aaKnown RBP23.63■■□□□ 1.37
TRAPPC9-211ENST00000521700 COL15A1P39059 1388 aa23.63■■□□□ 1.37
TRAPPC9-211ENST00000521700 A1BGP04217 495 aa23.62■■□□□ 1.37
TRAPPC9-211ENST00000521700 YY1P25490 414 aa23.62■■□□□ 1.37
TRAPPC9-211ENST00000521700 NARFQ9UHQ1 456 aa23.62■■□□□ 1.37
TRAPPC9-211ENST00000521700 USP16Q9Y5T5 823 aa23.62■■□□□ 1.37
TRAPPC9-211ENST00000521700 PRAMEF22A3QJZ6 481 aa23.61■■□□□ 1.37
TRAPPC9-211ENST00000521700 WDR43Q15061 677 aaKnown RBP eCLIP23.61■■□□□ 1.37
TRAPPC9-211ENST00000521700 PARP3Q9Y6F1 533 aa23.61■■□□□ 1.37
TRAPPC9-211ENST00000521700 SNRPA1P09661 255 aaKnown RBP23.6■■□□□ 1.37
TRAPPC9-211ENST00000521700 YBX3P16989 372 aaKnown RBP eCLIP23.6■■□□□ 1.37
TRAPPC9-211ENST00000521700 TM4SF1P30408 202 aa23.6■■□□□ 1.37
TRAPPC9-211ENST00000521700 TMPOP42166 694 aaKnown RBP23.6■■□□□ 1.37
TRAPPC9-211ENST00000521700 RIPK4P57078 832 aa23.6■■□□□ 1.37
TRAPPC9-211ENST00000521700 CCDC146Q8IYE0 955 aa23.6■■□□□ 1.37
TRAPPC9-211ENST00000521700 ADAMTS8Q9UP79 889 aa23.6■■□□□ 1.37
TRAPPC9-211ENST00000521700 DDR1Q08345 913 aa23.59■■□□□ 1.37
TRAPPC9-211ENST00000521700 PNISRQ8TF01 805 aaKnown RBP23.59■■□□□ 1.37
TRAPPC9-211ENST00000521700 BCL2L12Q9HB09 334 aa23.59■■□□□ 1.37
TRAPPC9-211ENST00000521700 UTRNP46939 3433 aa23.59■■□□□ 1.37
TRAPPC9-211ENST00000521700 A0A087WZG4 1122 aa23.58■■□□□ 1.37
TRAPPC9-211ENST00000521700 IL6STP40189 918 aaPredicted RBP23.58■■□□□ 1.37
TRAPPC9-211ENST00000521700 RUNDC1Q96C34 613 aa23.57■■□□□ 1.36
TRAPPC9-211ENST00000521700 KIF13BQ9NQT8 1826 aa23.56■■□□□ 1.36
TRAPPC9-211ENST00000521700 RRP7AQ9Y3A4 280 aaKnown RBP23.56■■□□□ 1.36
TRAPPC9-211ENST00000521700 ZNF330Q9Y3S2 320 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC9-211ENST00000521700 C10orf71Q711Q0 1435 aa23.56■■□□□ 1.36
TRAPPC9-211ENST00000521700 KDM3BQ7LBC6 1761 aa23.55■■□□□ 1.36
TRAPPC9-211ENST00000521700 POLRMTO00411 1230 aaKnown RBP23.55■■□□□ 1.36
TRAPPC9-211ENST00000521700 GRIN3BO60391 1043 aa23.54■■□□□ 1.36
TRAPPC9-211ENST00000521700 PIP4K2AP48426 406 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC9-211ENST00000521700 TGFB2P61812 414 aa23.54■■□□□ 1.36
TRAPPC9-211ENST00000521700 NFIXQ14938 502 aa23.54■■□□□ 1.36
TRAPPC9-211ENST00000521700 NEUROD2Q15784 382 aa23.54■■□□□ 1.36
TRAPPC9-211ENST00000521700 WWC3Q9ULE0 1092 aa23.54■■□□□ 1.36
TRAPPC9-211ENST00000521700 TBC1D2BQ9UPU7 963 aa23.54■■□□□ 1.36
TRAPPC9-211ENST00000521700 CHD4Q14839 1912 aa23.54■■□□□ 1.36
TRAPPC9-211ENST00000521700 EIF4A1P60842 406 aaKnown RBP23.53■■□□□ 1.36
TRAPPC9-211ENST00000521700 PXDNLA1KZ92 1463 aa23.52■■□□□ 1.36
TRAPPC9-211ENST00000521700 A0A0G2JLW4 131 aa23.52■■□□□ 1.36
TRAPPC9-211ENST00000521700 LMOD3Q0VAK6 560 aa23.52■■□□□ 1.36
TRAPPC9-211ENST00000521700 KIAA1551Q9HCM1 1747 aa23.52■■□□□ 1.36
TRAPPC9-211ENST00000521700 NBPF26B4DH59 902 aa23.51■■□□□ 1.35
TRAPPC9-211ENST00000521700 GIGYF1O75420 1035 aaPredicted RBP23.51■■□□□ 1.35
TRAPPC9-211ENST00000521700 NBPF10Q6P3W6 841 aaKnown RBP23.51■■□□□ 1.35
TRAPPC9-211ENST00000521700 NBPF15Q8N660 670 aa23.51■■□□□ 1.35
TRAPPC9-211ENST00000521700 N4BP2Q86UW6 1770 aaPredicted RBP23.5■■□□□ 1.35
TRAPPC9-211ENST00000521700 CCDC184Q52MB2 194 aa23.5■■□□□ 1.35
TRAPPC9-211ENST00000521700 NPM2Q86SE8 214 aaKnown RBP23.5■■□□□ 1.35
TRAPPC9-211ENST00000521700 TRIM35Q9UPQ4 493 aa23.5■■□□□ 1.35
TRAPPC9-211ENST00000521700 GOLGB1Q14789 3259 aaKnown RBP23.5■■□□□ 1.35
TRAPPC9-211ENST00000521700 DPEP1P16444 411 aa23.49■■□□□ 1.35
TRAPPC9-211ENST00000521700 TSPYL4Q9UJ04 414 aa23.49■■□□□ 1.35
TRAPPC9-211ENST00000521700 CAMTA2O94983 1202 aa23.48■■□□□ 1.35
TRAPPC9-211ENST00000521700 SERPINB2P05120 415 aa23.48■■□□□ 1.35
TRAPPC9-211ENST00000521700 TBC1D9BQ66K14 1250 aa23.48■■□□□ 1.35
TRAPPC9-211ENST00000521700 BICDL1Q6ZP65 573 aa23.48■■□□□ 1.35
TRAPPC9-211ENST00000521700 DZIP3Q86Y13 1208 aaKnown RBP23.48■■□□□ 1.35
TRAPPC9-211ENST00000521700 AFDNP55196 1824 aaKnown RBP23.47■■□□□ 1.35
TRAPPC9-211ENST00000521700 BABAM1Q9NWV8 329 aa23.47■■□□□ 1.35
TRAPPC9-211ENST00000521700 LAMB4A4D0S4 1761 aa23.46■■□□□ 1.35
TRAPPC9-211ENST00000521700 KCNA3P22001 575 aa23.46■■□□□ 1.35
TRAPPC9-211ENST00000521700 SCN7AQ01118 1682 aa23.46■■□□□ 1.35
TRAPPC9-211ENST00000521700 NRXN2Q9P2S2 1712 aa23.45■■□□□ 1.34
TRAPPC9-211ENST00000521700 APAF1O14727 1248 aa23.43■■□□□ 1.34
TRAPPC9-211ENST00000521700 ANP32CO43423 234 aa23.43■■□□□ 1.34
TRAPPC9-211ENST00000521700 BCS1LQ9Y276 419 aa23.43■■□□□ 1.34
TRAPPC9-211ENST00000521700 CHL1O00533 1208 aa23.42■■□□□ 1.34
TRAPPC9-211ENST00000521700 CHRNA5P30532 468 aa23.42■■□□□ 1.34
TRAPPC9-211ENST00000521700 BCORQ6W2J9 1755 aa23.42■■□□□ 1.34
TRAPPC9-211ENST00000521700 BRCA1P38398 1863 aaKnown RBP23.41■■□□□ 1.34
TRAPPC9-211ENST00000521700 CLEC4GQ6UXB4 293 aa23.41■■□□□ 1.34
TRAPPC9-211ENST00000521700 ZNF784Q8NCA9 323 aaPredicted RBP23.41■■□□□ 1.34
TRAPPC9-211ENST00000521700 SETDB2Q96T68 719 aa23.41■■□□□ 1.34
TRAPPC9-211ENST00000521700 PIM2Q9P1W9 311 aa23.41■■□□□ 1.34
TRAPPC9-211ENST00000521700 NGEFQ8N5V2 710 aa23.4■■□□□ 1.34
TRAPPC9-211ENST00000521700 LAS1LQ9Y4W2 734 aaKnown RBP23.4■■□□□ 1.34
TRAPPC9-211ENST00000521700 CARMIL3Q8ND23 1372 aa23.39■■□□□ 1.33
TRAPPC9-211ENST00000521700 RGL2O15211 777 aa23.37■■□□□ 1.33
TRAPPC9-211ENST00000521700 MYL6BP14649 208 aa23.37■■□□□ 1.33
TRAPPC9-211ENST00000521700 EIF2S2P20042 333 aaKnown RBP23.37■■□□□ 1.33
TRAPPC9-211ENST00000521700 HLFQ16534 295 aa23.37■■□□□ 1.33
TRAPPC9-211ENST00000521700 PRR5LQ6MZQ0 368 aa23.37■■□□□ 1.33
TRAPPC9-211ENST00000521700 CCDC24Q8N4L8 307 aa23.37■■□□□ 1.33
TRAPPC9-211ENST00000521700 ZNF652Q9Y2D9 606 aa23.37■■□□□ 1.33
TRAPPC9-211ENST00000521700 KRT24Q2M2I5 525 aa23.36■■□□□ 1.33
TRAPPC9-211ENST00000521700 DALRD3Q5D0E6 543 aaKnown RBP23.36■■□□□ 1.33
TRAPPC9-211ENST00000521700 MRS2Q9HD23 443 aa23.36■■□□□ 1.33
TRAPPC9-211ENST00000521700 ERBB4Q15303 1308 aa23.35■■□□□ 1.33
TRAPPC9-211ENST00000521700 PDIA6Q15084 440 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms