RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 SULF1Q8IWU6 871 aa8.72□□□□□ -1.01
CTNNA1-228ENST00000521640 PARP9Q8IXQ6 854 aa8.72□□□□□ -1.01
CTNNA1-228ENST00000521640 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
CTNNA1-228ENST00000521640 NUDT16Q96DE0 195 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-228ENST00000521640 CCDC136Q96JN2 1154 aa8.72□□□□□ -1.01
CTNNA1-228ENST00000521640 IL16Q14005 1332 aa8.72□□□□□ -1.01
CTNNA1-228ENST00000521640 OVOS2A0A0J9YW53 1432 aa8.71□□□□□ -1.01
CTNNA1-228ENST00000521640 OVOS2Q6IE36 1432 aa8.71□□□□□ -1.01
CTNNA1-228ENST00000521640 SSH2Q76I76 1423 aa8.71□□□□□ -1.01
CTNNA1-228ENST00000521640 GCGRP47871 477 aa8.71□□□□□ -1.02
CTNNA1-228ENST00000521640 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-228ENST00000521640 KMT5BQ4FZB7 885 aa8.71□□□□□ -1.02
CTNNA1-228ENST00000521640 BLOC1S3Q6QNY0 202 aa8.71□□□□□ -1.02
CTNNA1-228ENST00000521640 CCDC146Q8IYE0 955 aa8.71□□□□□ -1.02
CTNNA1-228ENST00000521640 TCP11L2Q8N4U5 519 aa8.71□□□□□ -1.02
CTNNA1-228ENST00000521640 GGNBP2Q9H3C7 697 aa8.71□□□□□ -1.02
CTNNA1-228ENST00000521640 FMN2Q9NZ56 1722 aa8.71□□□□□ -1.02
CTNNA1-228ENST00000521640 USP6P35125 1406 aa8.71□□□□□ -1.02
CTNNA1-228ENST00000521640 DIAPH1O60610 1272 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 PDE4DQ08499 809 aa8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 GIGYF2Q6Y7W6 1299 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 PLEKHF1Q96S99 279 aa8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 SALL2Q9Y467 1007 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 PCDHB3Q9Y5E6 796 aa8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 TTC21AQ8NDW8 1320 aa8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 CHD2O14647 1828 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 MAP2P11137 1827 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 USP31Q70CQ4 1352 aa8.7□□□□□ -1.02
CTNNA1-228ENST00000521640 U2AF1L5P0DN76 240 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-228ENST00000521640 U2AF1Q01081 240 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTNNA1-228ENST00000521640 PDE3AQ14432 1141 aa8.69□□□□□ -1.02
CTNNA1-228ENST00000521640 PUS10Q3MIT2 529 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-228ENST00000521640 PRR14Q9BWN1 585 aa8.69□□□□□ -1.02
CTNNA1-228ENST00000521640 MYH16Q9H6N6 1097 aa8.69□□□□□ -1.02
CTNNA1-228ENST00000521640 PRR36Q9H6K5 1346 aa8.69□□□□□ -1.02
CTNNA1-228ENST00000521640 KIF24Q5T7B8 1368 aa8.69□□□□□ -1.02
CTNNA1-228ENST00000521640 NWD1Q149M9 1564 aa8.69□□□□□ -1.02
CTNNA1-228ENST00000521640 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-228ENST00000521640 TNNT2P45379 298 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-228ENST00000521640 CEBPAP49715 358 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-228ENST00000521640 KCNC4Q03721 635 aa8.68□□□□□ -1.02
CTNNA1-228ENST00000521640 FUT2Q10981 343 aa8.68□□□□□ -1.02
CTNNA1-228ENST00000521640 COG3Q96JB2 828 aa8.68□□□□□ -1.02
CTNNA1-228ENST00000521640 POLKQ9UBT6 870 aa8.68□□□□□ -1.02
CTNNA1-228ENST00000521640 AMOTL2Q9Y2J4 779 aa8.68□□□□□ -1.02
CTNNA1-228ENST00000521640 MAPK8IP3Q9UPT6 1336 aa8.68□□□□□ -1.02
CTNNA1-228ENST00000521640 MS4A1P11836 297 aa8.67□□□□□ -1.02
CTNNA1-228ENST00000521640 CALD1Q05682 793 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-228ENST00000521640 EXOC6Q8TAG9 804 aa8.67□□□□□ -1.02
CTNNA1-228ENST00000521640 IL21Q9HBE4 155 aa8.67□□□□□ -1.02
CTNNA1-228ENST00000521640 RGPD1P0DJD0 1748 aa8.66□□□□□ -1.02
CTNNA1-228ENST00000521640 TTC21BQ7Z4L5 1316 aa8.66□□□□□ -1.02
CTNNA1-228ENST00000521640 FANCIQ9NVI1 1328 aa8.66□□□□□ -1.02
CTNNA1-228ENST00000521640 NEFMP07197 916 aa8.66□□□□□ -1.02
CTNNA1-228ENST00000521640 TMPOP42166 694 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-228ENST00000521640 IFFO2Q5TF58 517 aa8.66□□□□□ -1.02
CTNNA1-228ENST00000521640 NKX2-3Q8TAU0 364 aa8.66□□□□□ -1.02
CTNNA1-228ENST00000521640 ZNF428Q96B54 188 aa8.66□□□□□ -1.02
CTNNA1-228ENST00000521640 IL13P35225 146 aa8.65□□□□□ -1.02
CTNNA1-228ENST00000521640 LMOD3Q0VAK6 560 aa8.65□□□□□ -1.02
CTNNA1-228ENST00000521640 ANKLE2Q86XL3 938 aa8.65□□□□□ -1.02
CTNNA1-228ENST00000521640 HLA-CQ95604 372 aa8.65□□□□□ -1.02
CTNNA1-228ENST00000521640 RSPH6AQ9H0K4 717 aa8.65□□□□□ -1.02
CTNNA1-228ENST00000521640 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-228ENST00000521640 ACEP12821 1306 aa8.64□□□□□ -1.03
CTNNA1-228ENST00000521640 SENP3-EIF4A1A0A087X0R7 540 aa8.64□□□□□ -1.03
CTNNA1-228ENST00000521640 TCERG1O14776 1098 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-228ENST00000521640 TLL1O43897 1013 aa8.64□□□□□ -1.03
CTNNA1-228ENST00000521640 ZPR1O75312 459 aa8.64□□□□□ -1.03
CTNNA1-228ENST00000521640 MORN1Q5T089 497 aa8.64□□□□□ -1.03
CTNNA1-228ENST00000521640 CENPQQ7L2Z9 268 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-228ENST00000521640 NME9Q86XW9 330 aa8.64□□□□□ -1.03
CTNNA1-228ENST00000521640 SLC26A8Q96RN1 970 aa8.64□□□□□ -1.03
CTNNA1-228ENST00000521640 CRBNQ96SW2 442 aa8.64□□□□□ -1.03
CTNNA1-228ENST00000521640 ADGRL3Q9HAR2 1447 aa8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 PIK3C2AO00443 1686 aa8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 KDM2BQ8NHM5 1336 aa8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 PHRF1Q9P1Y6 1649 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 KDM4AO75164 1064 aa8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 RARSP54136 660 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 GPBP1L1Q9HC44 474 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 NPHP4O75161 1426 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-228ENST00000521640 ARHGEF10O15013 1369 aa8.62□□□□□ -1.03
CTNNA1-228ENST00000521640 A0A0G2JS52 829 aa8.62□□□□□ -1.03
CTNNA1-228ENST00000521640 BRPF1P55201 1214 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-228ENST00000521640 NFE2L2Q16236 605 aa8.62□□□□□ -1.03
CTNNA1-228ENST00000521640 SCUBE3Q8IX30 993 aa8.62□□□□□ -1.03
CTNNA1-228ENST00000521640 SLC27A5Q9Y2P5 690 aa8.62□□□□□ -1.03
CTNNA1-228ENST00000521640 PEAK1Q9H792 1746 aa8.62□□□□□ -1.03
CTNNA1-228ENST00000521640 MARF1Q9Y4F3 1742 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-228ENST00000521640 SBNO1A3KN83 1393 aa8.61□□□□□ -1.03
CTNNA1-228ENST00000521640 RTL1A6NKG5 1358 aa8.61□□□□□ -1.03
CTNNA1-228ENST00000521640 FLT4P35916 1363 aa8.61□□□□□ -1.03
CTNNA1-228ENST00000521640 RGPD8O14715 1765 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-228ENST00000521640 BEGAINQ9BUH8 593 aa8.61□□□□□ -1.03
CTNNA1-228ENST00000521640 KIF1AQ12756 1690 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms