RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 CEP170BQ9Y4F5 1589 aaPredicted RBP21.2■□□□□ 0.98
TRAM1-205ENST00000521425 ATF3P18847 181 aa21.2■□□□□ 0.98
TRAM1-205ENST00000521425 RIMS1Q86UR5 1692 aaKnown RBP21.2■□□□□ 0.98
TRAM1-205ENST00000521425 DDX11L8A8MPP1 907 aa21.19■□□□□ 0.98
TRAM1-205ENST00000521425 MAP3K5Q99683 1374 aa21.19■□□□□ 0.98
TRAM1-205ENST00000521425 PTCH1Q13635 1447 aa21.19■□□□□ 0.98
TRAM1-205ENST00000521425 IFIT2P09913 472 aaKnown RBP21.19■□□□□ 0.98
TRAM1-205ENST00000521425 RABEP1Q15276 862 aa21.19■□□□□ 0.98
TRAM1-205ENST00000521425 AACSQ86V21 672 aa21.19■□□□□ 0.98
TRAM1-205ENST00000521425 AEBP2Q6ZN18 517 aaPredicted RBP21.19■□□□□ 0.98
TRAM1-205ENST00000521425 RHPN1Q8TCX5 695 aa21.19■□□□□ 0.98
TRAM1-205ENST00000521425 IP6K1Q92551 441 aa21.19■□□□□ 0.98
TRAM1-205ENST00000521425 ATP8B2P98198 1209 aa21.18■□□□□ 0.98
TRAM1-205ENST00000521425 GRPEL1Q9HAV7 217 aa21.18■□□□□ 0.98
TRAM1-205ENST00000521425 BAG4O95429 457 aaKnown RBP21.17■□□□□ 0.98
TRAM1-205ENST00000521425 EIF4A1P60842 406 aaKnown RBP21.17■□□□□ 0.98
TRAM1-205ENST00000521425 DIAPH3Q9NSV4 1193 aa21.17■□□□□ 0.98
TRAM1-205ENST00000521425 AK9Q5TCS8 1911 aa21.17■□□□□ 0.98
TRAM1-205ENST00000521425 CHGBP05060 677 aa21.17■□□□□ 0.98
TRAM1-205ENST00000521425 PRDM4Q9UKN5 801 aa21.17■□□□□ 0.98
TRAM1-205ENST00000521425 BRPF1P55201 1214 aaPredicted RBP21.17■□□□□ 0.98
TRAM1-205ENST00000521425 MYD88Q99836 296 aa21.17■□□□□ 0.98
TRAM1-205ENST00000521425 CRB1P82279 1406 aa21.17■□□□□ 0.98
TRAM1-205ENST00000521425 STK3Q13188 491 aa21.16■□□□□ 0.98
TRAM1-205ENST00000521425 ANP32BQ92688 251 aaKnown RBP21.16■□□□□ 0.98
TRAM1-205ENST00000521425 SYTL4Q96C24 671 aaPredicted RBP21.16■□□□□ 0.98
TRAM1-205ENST00000521425 MCCP23508 829 aa21.16■□□□□ 0.98
TRAM1-205ENST00000521425 NCBP3Q53F19 620 aaKnown RBP21.16■□□□□ 0.98
TRAM1-205ENST00000521425 OVOS2A0A0J9YW53 1432 aa21.16■□□□□ 0.98
TRAM1-205ENST00000521425 OVOS2Q6IE36 1432 aa21.16■□□□□ 0.98
TRAM1-205ENST00000521425 BBXQ8WY36 941 aaPredicted RBP21.16■□□□□ 0.98
TRAM1-205ENST00000521425 SPATA31D1Q6ZQQ2 1576 aa21.15■□□□□ 0.98
TRAM1-205ENST00000521425 SIRT1Q96EB6 747 aa21.15■□□□□ 0.98
TRAM1-205ENST00000521425 TMX3Q96JJ7 454 aa21.15■□□□□ 0.98
TRAM1-205ENST00000521425 KDM4AO75164 1064 aa21.15■□□□□ 0.98
TRAM1-205ENST00000521425 DNAJC2Q99543 621 aaKnown RBP21.15■□□□□ 0.98
TRAM1-205ENST00000521425 ESYT1Q9BSJ8 1104 aa21.15■□□□□ 0.98
TRAM1-205ENST00000521425 FAM177BA6PVY3 158 aa21.14■□□□□ 0.98
TRAM1-205ENST00000521425 COPS6Q7L5N1 327 aa21.14■□□□□ 0.98
TRAM1-205ENST00000521425 TTC5Q8N0Z6 440 aa21.14■□□□□ 0.97
TRAM1-205ENST00000521425 CHMLP26374 656 aa21.14■□□□□ 0.97
TRAM1-205ENST00000521425 CLASRPQ8N2M8 674 aaKnown RBP21.14■□□□□ 0.97
TRAM1-205ENST00000521425 NEUROD6Q96NK8 337 aa21.14■□□□□ 0.97
TRAM1-205ENST00000521425 R3HCC1Q9Y3T6 440 aaKnown RBP21.14■□□□□ 0.97
TRAM1-205ENST00000521425 CDC42BPGQ6DT37 1551 aa21.14■□□□□ 0.97
TRAM1-205ENST00000521425 TPM2P07951 284 aa21.13■□□□□ 0.97
TRAM1-205ENST00000521425 USP16Q9Y5T5 823 aa21.13■□□□□ 0.97
TRAM1-205ENST00000521425 ATP10DQ9P241 1426 aa21.13■□□□□ 0.97
TRAM1-205ENST00000521425 PRPF40BQ6NWY9 871 aaKnown RBP21.13■□□□□ 0.97
TRAM1-205ENST00000521425 FERMT3Q86UX7 667 aa21.13■□□□□ 0.97
TRAM1-205ENST00000521425 XAGE3Q8WTP9 111 aa21.13■□□□□ 0.97
TRAM1-205ENST00000521425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.13■□□□□ 0.97
TRAM1-205ENST00000521425 RAB3GAP1Q15042 981 aa21.12■□□□□ 0.97
TRAM1-205ENST00000521425 SLFNL1Q499Z3 407 aa21.12■□□□□ 0.97
TRAM1-205ENST00000521425 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
TRAM1-205ENST00000521425 UBE3BQ7Z3V4 1068 aa21.11■□□□□ 0.97
TRAM1-205ENST00000521425 MRE11P49959 708 aa21.11■□□□□ 0.97
TRAM1-205ENST00000521425 G3BP1Q13283 466 aaKnown RBP eCLIP21.11■□□□□ 0.97
TRAM1-205ENST00000521425 NECAB1Q8N987 351 aa21.11■□□□□ 0.97
TRAM1-205ENST00000521425 TLR7Q9NYK1 1049 aaKnown RBP21.11■□□□□ 0.97
TRAM1-205ENST00000521425 NSFL1CQ9UNZ2 370 aaKnown RBP21.11■□□□□ 0.97
TRAM1-205ENST00000521425 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.11■□□□□ 0.97
TRAM1-205ENST00000521425 VPS37CA5D8V6 355 aaPredicted RBP21.11■□□□□ 0.97
TRAM1-205ENST00000521425 ZBTB3Q9H5J0 574 aa21.11■□□□□ 0.97
TRAM1-205ENST00000521425 KIF20BQ96Q89 1820 aa21.11■□□□□ 0.97
TRAM1-205ENST00000521425 USP32Q8NFA0 1604 aa21.1■□□□□ 0.97
TRAM1-205ENST00000521425 SYCE3A1L190 88 aa21.1■□□□□ 0.97
TRAM1-205ENST00000521425 SNX21Q969T3 373 aa21.1■□□□□ 0.97
TRAM1-205ENST00000521425 BICC1Q9H694 974 aaKnown RBP21.1■□□□□ 0.97
TRAM1-205ENST00000521425 RGS12O14924 1447 aa21.1■□□□□ 0.97
TRAM1-205ENST00000521425 ARHGEF10O15013 1369 aa21.1■□□□□ 0.97
TRAM1-205ENST00000521425 CASTP20810 708 aaKnown RBP21.1■□□□□ 0.97
TRAM1-205ENST00000521425 DBF4Q9UBU7 674 aaPredicted RBP21.1■□□□□ 0.97
TRAM1-205ENST00000521425 TOM1L2Q6ZVM7 507 aa21.09■□□□□ 0.97
TRAM1-205ENST00000521425 ZNF496Q96IT1 587 aaPredicted RBP21.09■□□□□ 0.97
TRAM1-205ENST00000521425 FIBPO43427 364 aa21.09■□□□□ 0.97
TRAM1-205ENST00000521425 KIAA0232Q92628 1395 aa21.08■□□□□ 0.97
TRAM1-205ENST00000521425 KCNH5Q8NCM2 988 aa21.08■□□□□ 0.97
TRAM1-205ENST00000521425 FAM227BQ96M60 508 aa21.08■□□□□ 0.97
TRAM1-205ENST00000521425 FSD1Q9BTV5 496 aa21.08■□□□□ 0.97
TRAM1-205ENST00000521425 LRRC2Q9BYS8 371 aa21.08■□□□□ 0.97
TRAM1-205ENST00000521425 RASEFQ8IZ41 740 aa21.08■□□□□ 0.96
TRAM1-205ENST00000521425 CCDC83Q8IWF9 413 aa21.07■□□□□ 0.96
TRAM1-205ENST00000521425 SUCLG2Q96I99 432 aa21.07■□□□□ 0.96
TRAM1-205ENST00000521425 JAKMIP1Q96N16 626 aaKnown RBP21.07■□□□□ 0.96
TRAM1-205ENST00000521425 FAM173BQ6P4H8 233 aa21.06■□□□□ 0.96
TRAM1-205ENST00000521425 PRDM11Q9NQV5 511 aa21.06■□□□□ 0.96
TRAM1-205ENST00000521425 NRXN3Q9Y4C0 1643 aa21.06■□□□□ 0.96
TRAM1-205ENST00000521425 NEXNQ0ZGT2 675 aa21.06■□□□□ 0.96
TRAM1-205ENST00000521425 AKAP4Q5JQC9 854 aa21.06■□□□□ 0.96
TRAM1-205ENST00000521425 BEND3Q5T5X7 828 aa21.06■□□□□ 0.96
TRAM1-205ENST00000521425 KIF1BPQ96EK5 621 aa21.06■□□□□ 0.96
TRAM1-205ENST00000521425 GIGYF1O75420 1035 aaPredicted RBP21.06■□□□□ 0.96
TRAM1-205ENST00000521425 TATP17735 454 aaPredicted RBP21.06■□□□□ 0.96
TRAM1-205ENST00000521425 AGLP35573 1532 aa21.05■□□□□ 0.96
TRAM1-205ENST00000521425 COL9A3Q14050 684 aaPredicted RBP21.05■□□□□ 0.96
TRAM1-205ENST00000521425 CABP4P57796 275 aa21.05■□□□□ 0.96
TRAM1-205ENST00000521425 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
TRAM1-205ENST00000521425 MSNP26038 577 aaKnown RBP21.05■□□□□ 0.96
TRAM1-205ENST00000521425 CNTROBQ8N137 903 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms