RNA–Protein interactions for RNA: ENST00000521147.1

CASC9-202, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 731 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-202ENST00000521147 SBF1O95248 1867 aa10.46□□□□□ -0.74
CASC9-202ENST00000521147 TNRC6CQ9HCJ0 1690 aaKnown RBP10.45□□□□□ -0.74
CASC9-202ENST00000521147 C10orf71Q711Q0 1435 aa10.45□□□□□ -0.74
CASC9-202ENST00000521147 CYP27B1O15528 508 aa10.45□□□□□ -0.74
CASC9-202ENST00000521147 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
CASC9-202ENST00000521147 ITPK1Q13572 414 aa10.45□□□□□ -0.74
CASC9-202ENST00000521147 FKBP8Q14318 412 aa10.45□□□□□ -0.74
CASC9-202ENST00000521147 PIGBQ92521 554 aa10.45□□□□□ -0.74
CASC9-202ENST00000521147 PCDH10Q9P2E7 1040 aa10.45□□□□□ -0.74
CASC9-202ENST00000521147 PCDHB13Q9Y5F0 798 aa10.45□□□□□ -0.74
CASC9-202ENST00000521147 C4AP0C0L4 1744 aa10.44□□□□□ -0.74
CASC9-202ENST00000521147 INSRP06213 1382 aa10.44□□□□□ -0.74
CASC9-202ENST00000521147 PCDH11XQ9BZA7 1347 aa10.44□□□□□ -0.74
CASC9-202ENST00000521147 PCDH11YQ9BZA8 1340 aa10.44□□□□□ -0.74
CASC9-202ENST00000521147 SSFA2P28290 1259 aa10.44□□□□□ -0.74
CASC9-202ENST00000521147 RALBP1Q15311 655 aa10.44□□□□□ -0.74
CASC9-202ENST00000521147 RAPGEF4Q8WZA2 1011 aa10.44□□□□□ -0.74
CASC9-202ENST00000521147 ZBTB47Q9UFB7 747 aaPredicted RBP10.44□□□□□ -0.74
CASC9-202ENST00000521147 LOC102724428A0A0B4J2F2 783 aa10.43□□□□□ -0.74
CASC9-202ENST00000521147 TATP17735 454 aaPredicted RBP10.43□□□□□ -0.74
CASC9-202ENST00000521147 SIK1P57059 783 aa10.43□□□□□ -0.74
CASC9-202ENST00000521147 FSTL1Q12841 308 aa10.43□□□□□ -0.74
CASC9-202ENST00000521147 COG3Q96JB2 828 aa10.43□□□□□ -0.74
CASC9-202ENST00000521147 RNF181Q9P0P0 153 aa10.43□□□□□ -0.74
CASC9-202ENST00000521147 NSD3Q9BZ95 1437 aa10.42□□□□□ -0.74
CASC9-202ENST00000521147 KCNA3P22001 575 aa10.42□□□□□ -0.74
CASC9-202ENST00000521147 ASAP1Q9ULH1 1129 aa10.42□□□□□ -0.74
CASC9-202ENST00000521147 COLQQ9Y215 455 aaPredicted RBP10.42□□□□□ -0.74
CASC9-202ENST00000521147 SLC34A2O95436 690 aa10.41□□□□□ -0.74
CASC9-202ENST00000521147 TGFB2P61812 414 aa10.41□□□□□ -0.74
CASC9-202ENST00000521147 CDCA8Q53HL2 280 aa10.41□□□□□ -0.74
CASC9-202ENST00000521147 HSP90AB2PQ58FF8 381 aa10.41□□□□□ -0.74
CASC9-202ENST00000521147 SMARCC1Q92922 1105 aaPredicted RBP10.41□□□□□ -0.74
CASC9-202ENST00000521147 TERF2IPQ9NYB0 399 aa10.41□□□□□ -0.74
CASC9-202ENST00000521147 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
CASC9-202ENST00000521147 SMG6Q86US8 1419 aaKnown RBP10.41□□□□□ -0.74
CASC9-202ENST00000521147 CCDC88AQ3V6T2 1871 aa10.4□□□□□ -0.74
CASC9-202ENST00000521147 PLEKHG2Q9H7P9 1386 aa10.4□□□□□ -0.74
CASC9-202ENST00000521147 MYBBP1AQ9BQG0 1328 aaKnown RBP10.4□□□□□ -0.74
CASC9-202ENST00000521147 MYH14Q7Z406 1995 aaKnown RBP10.4□□□□□ -0.74
CASC9-202ENST00000521147 ATP6V1AP38606 617 aa10.4□□□□□ -0.74
CASC9-202ENST00000521147 RASSF7Q02833 373 aa10.4□□□□□ -0.74
CASC9-202ENST00000521147 GGNBP2Q9H3C7 697 aa10.4□□□□□ -0.74
CASC9-202ENST00000521147 RTL1A6NKG5 1358 aa10.39□□□□□ -0.75
CASC9-202ENST00000521147 CGNL1Q0VF96 1302 aa10.39□□□□□ -0.75
CASC9-202ENST00000521147 KDM2BQ8NHM5 1336 aa10.39□□□□□ -0.75
CASC9-202ENST00000521147 CHRNA5P30532 468 aa10.39□□□□□ -0.75
CASC9-202ENST00000521147 LCE2DQ5TA82 110 aaPredicted RBP10.39□□□□□ -0.75
CASC9-202ENST00000521147 SMC1BQ8NDV3 1235 aa10.39□□□□□ -0.75
CASC9-202ENST00000521147 COL5A3P25940 1745 aaPredicted RBP10.38□□□□□ -0.75
CASC9-202ENST00000521147 TIAM2Q8IVF5 1701 aa10.38□□□□□ -0.75
CASC9-202ENST00000521147 TMF1P82094 1093 aa10.38□□□□□ -0.75
CASC9-202ENST00000521147 ARHGEF1Q92888 912 aaKnown RBP10.38□□□□□ -0.75
CASC9-202ENST00000521147 DCAF5Q96JK2 942 aa10.38□□□□□ -0.75
CASC9-202ENST00000521147 SLC4A9Q96Q91 983 aa10.38□□□□□ -0.75
CASC9-202ENST00000521147 CCDC87Q9NVE4 849 aa10.38□□□□□ -0.75
CASC9-202ENST00000521147 GYS1P13807 737 aa10.37□□□□□ -0.75
CASC9-202ENST00000521147 NUBP1P53384 320 aa10.37□□□□□ -0.75
CASC9-202ENST00000521147 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
CASC9-202ENST00000521147 ATG3Q9NT62 314 aa10.37□□□□□ -0.75
CASC9-202ENST00000521147 KIF20BQ96Q89 1820 aa10.37□□□□□ -0.75
CASC9-202ENST00000521147 KDRP35968 1356 aa10.37□□□□□ -0.75
CASC9-202ENST00000521147 DALRD3Q5D0E6 543 aaKnown RBP10.36□□□□□ -0.75
CASC9-202ENST00000521147 TRAPPC3LQ5T215 181 aa10.36□□□□□ -0.75
CASC9-202ENST00000521147 IER5LQ5T953 404 aa10.36□□□□□ -0.75
CASC9-202ENST00000521147 TMOD3Q9NYL9 352 aa10.36□□□□□ -0.75
CASC9-202ENST00000521147 PIM2Q9P1W9 311 aa10.36□□□□□ -0.75
CASC9-202ENST00000521147 SRP68Q9UHB9 627 aaKnown RBP10.36□□□□□ -0.75
CASC9-202ENST00000521147 MKRN1Q9UHC7 482 aaKnown RBP10.36□□□□□ -0.75
CASC9-202ENST00000521147 RTCBQ9Y3I0 505 aaKnown RBP10.36□□□□□ -0.75
CASC9-202ENST00000521147 PARP3Q9Y6F1 533 aa10.36□□□□□ -0.75
CASC9-202ENST00000521147 FOXN1O15353 648 aa10.35□□□□□ -0.75
CASC9-202ENST00000521147 DDR1Q08345 913 aa10.35□□□□□ -0.75
CASC9-202ENST00000521147 IFNL1Q8IU54 200 aa10.35□□□□□ -0.75
CASC9-202ENST00000521147 FAM9BQ8IZU0 186 aa10.35□□□□□ -0.75
CASC9-202ENST00000521147 NLGN1Q8N2Q7 840 aa10.35□□□□□ -0.75
CASC9-202ENST00000521147 PPP4R2Q9NY27 417 aa10.35□□□□□ -0.75
CASC9-202ENST00000521147 EMILIN1Q9Y6C2 1016 aa10.35□□□□□ -0.75
CASC9-202ENST00000521147 FYB1O15117 783 aa10.34□□□□□ -0.75
CASC9-202ENST00000521147 NKX1-1Q15270 411 aaPredicted RBP10.34□□□□□ -0.75
CASC9-202ENST00000521147 POLR3GLQ9BT43 218 aa10.34□□□□□ -0.75
CASC9-202ENST00000521147 TMEM106CQ9BVX2 250 aa10.34□□□□□ -0.75
CASC9-202ENST00000521147 AFDNP55196 1824 aaKnown RBP10.33□□□□□ -0.76
CASC9-202ENST00000521147 ST20-MTHFSA0A0A6YYL1 179 aa10.33□□□□□ -0.76
CASC9-202ENST00000521147 POTECB2RU33 542 aa10.33□□□□□ -0.76
CASC9-202ENST00000521147 HMGB2P26583 209 aaKnown RBP10.33□□□□□ -0.76
CASC9-202ENST00000521147 RFC4P35249 363 aa10.33□□□□□ -0.76
CASC9-202ENST00000521147 FAM161AQ3B820 660 aa10.33□□□□□ -0.76
CASC9-202ENST00000521147 FLT4P35916 1363 aa10.33□□□□□ -0.76
CASC9-202ENST00000521147 PHKG2P15735 406 aa10.32□□□□□ -0.76
CASC9-202ENST00000521147 TSHZ2Q9NRE2 1034 aa10.32□□□□□ -0.76
CASC9-202ENST00000521147 NUDCQ9Y266 331 aa10.32□□□□□ -0.76
CASC9-202ENST00000521147 NCAPD2Q15021 1401 aa10.32□□□□□ -0.76
CASC9-202ENST00000521147 ADAMTS7Q9UKP4 1686 aa10.31□□□□□ -0.76
CASC9-202ENST00000521147 TJP1Q07157 1748 aa10.31□□□□□ -0.76
CASC9-202ENST00000521147 GLTPD2A6NH11 291 aa10.31□□□□□ -0.76
CASC9-202ENST00000521147 PPM1GO15355 546 aaPredicted RBP10.31□□□□□ -0.76
CASC9-202ENST00000521147 RPS6KA4O75676 772 aa10.31□□□□□ -0.76
CASC9-202ENST00000521147 VEGFAP15692 232 aaPredicted RBP10.31□□□□□ -0.76
CASC9-202ENST00000521147 PLCG2P16885 1265 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms