RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 BCL2L12Q9HB09 334 aa27.36■■□□□ 1.97
PABPC1-217ENST00000521067 NARFQ9UHQ1 456 aa27.36■■□□□ 1.97
PABPC1-217ENST00000521067 NFIXQ14938 502 aa27.35■■□□□ 1.97
PABPC1-217ENST00000521067 ZNF496Q96IT1 587 aaPredicted RBP27.33■■□□□ 1.97
PABPC1-217ENST00000521067 PHACTR3Q96KR7 559 aa27.33■■□□□ 1.97
PABPC1-217ENST00000521067 COL15A1P39059 1388 aa27.33■■□□□ 1.97
PABPC1-217ENST00000521067 GNAT3A8MTJ3 354 aa27.32■■□□□ 1.96
PABPC1-217ENST00000521067 CANXP27824 592 aaKnown RBP27.32■■□□□ 1.96
PABPC1-217ENST00000521067 DALRD3Q5D0E6 543 aaKnown RBP27.32■■□□□ 1.96
PABPC1-217ENST00000521067 BRCA1P38398 1863 aaKnown RBP27.32■■□□□ 1.96
PABPC1-217ENST00000521067 HSPA6P17066 643 aa27.31■■□□□ 1.96
PABPC1-217ENST00000521067 GAS2L2Q8NHY3 880 aa27.31■■□□□ 1.96
PABPC1-217ENST00000521067 C9orf131Q5VYM1 1079 aa27.3■■□□□ 1.96
PABPC1-217ENST00000521067 EIF5P55010 431 aaKnown RBP27.29■■□□□ 1.96
PABPC1-217ENST00000521067 ZNF790Q6PG37 636 aa27.29■■□□□ 1.96
PABPC1-217ENST00000521067 TTC5Q8N0Z6 440 aa27.29■■□□□ 1.96
PABPC1-217ENST00000521067 VIRMAQ69YN4 1812 aaKnown RBP27.29■■□□□ 1.96
PABPC1-217ENST00000521067 TEFQ10587 303 aa27.28■■□□□ 1.96
PABPC1-217ENST00000521067 STARD3NLO95772 234 aa27.27■■□□□ 1.96
PABPC1-217ENST00000521067 SERPINB2P05120 415 aa27.27■■□□□ 1.96
PABPC1-217ENST00000521067 RSPH6AQ9H0K4 717 aa27.27■■□□□ 1.96
PABPC1-217ENST00000521067 NMRK2Q9NPI5 230 aa27.27■■□□□ 1.96
PABPC1-217ENST00000521067 KCNQ3O43525 872 aa27.26■■□□□ 1.95
PABPC1-217ENST00000521067 PRKAR2BP31323 418 aa27.26■■□□□ 1.95
PABPC1-217ENST00000521067 UBR2Q8IWV8 1755 aa27.25■■□□□ 1.95
PABPC1-217ENST00000521067 HEG1Q9ULI3 1381 aa27.25■■□□□ 1.95
PABPC1-217ENST00000521067 CEMIPQ8WUJ3 1361 aa27.24■■□□□ 1.95
PABPC1-217ENST00000521067 BICDL1Q6ZP65 573 aa27.23■■□□□ 1.95
PABPC1-217ENST00000521067 ARFGEF1Q9Y6D6 1849 aa27.23■■□□□ 1.95
PABPC1-217ENST00000521067 PPP2R1AP30153 589 aa27.22■■□□□ 1.95
PABPC1-217ENST00000521067 A1BGP04217 495 aa27.21■■□□□ 1.95
PABPC1-217ENST00000521067 TBC1D9BQ66K14 1250 aa27.21■■□□□ 1.95
PABPC1-217ENST00000521067 CFAP53Q96M91 514 aa27.21■■□□□ 1.95
PABPC1-217ENST00000521067 TEX13AQ9BXU3 409 aaPredicted RBP27.21■■□□□ 1.95
PABPC1-217ENST00000521067 TBC1D2BQ9UPU7 963 aa27.21■■□□□ 1.95
PABPC1-217ENST00000521067 TOMM70O94826 608 aa27.2■■□□□ 1.94
PABPC1-217ENST00000521067 RNF181Q9P0P0 153 aa27.2■■□□□ 1.94
PABPC1-217ENST00000521067 AFDNP55196 1824 aaKnown RBP27.2■■□□□ 1.94
PABPC1-217ENST00000521067 CARMIL3Q8ND23 1372 aa27.2■■□□□ 1.94
PABPC1-217ENST00000521067 A0A087WZG4 1122 aa27.19■■□□□ 1.94
PABPC1-217ENST00000521067 FMNL2Q96PY5 1086 aa27.19■■□□□ 1.94
PABPC1-217ENST00000521067 NRXN2Q9P2S2 1712 aa27.19■■□□□ 1.94
PABPC1-217ENST00000521067 BTBD11A6QL63 1104 aa27.18■■□□□ 1.94
PABPC1-217ENST00000521067 U2AF1L5P0DN76 240 aaPredicted RBP27.17■■□□□ 1.94
PABPC1-217ENST00000521067 IL6STP40189 918 aaPredicted RBP27.17■■□□□ 1.94
PABPC1-217ENST00000521067 PRELPP51888 382 aa27.17■■□□□ 1.94
PABPC1-217ENST00000521067 U2AF1Q01081 240 aaKnown RBP eCLIP27.17■■□□□ 1.94
PABPC1-217ENST00000521067 RASSF7Q02833 373 aa27.17■■□□□ 1.94
PABPC1-217ENST00000521067 C2CD5Q86YS7 1000 aa27.17■■□□□ 1.94
PABPC1-217ENST00000521067 NUDCQ9Y266 331 aa27.17■■□□□ 1.94
PABPC1-217ENST00000521067 ZNF330Q9Y3S2 320 aaPredicted RBP27.17■■□□□ 1.94
PABPC1-217ENST00000521067 SIPA1L3O60292 1781 aaPredicted RBP27.17■■□□□ 1.94
PABPC1-217ENST00000521067 MCM10Q7L590 875 aa27.16■■□□□ 1.94
PABPC1-217ENST00000521067 CCDC24Q8N4L8 307 aa27.16■■□□□ 1.94
PABPC1-217ENST00000521067 USP16Q9Y5T5 823 aa27.16■■□□□ 1.94
PABPC1-217ENST00000521067 PRAMEF22A3QJZ6 481 aa27.15■■□□□ 1.94
PABPC1-217ENST00000521067 TTLL6Q8N841 843 aa27.14■■□□□ 1.94
PABPC1-217ENST00000521067 H0YIN7 160 aa27.13■■□□□ 1.93
PABPC1-217ENST00000521067 CAMTA2O94983 1202 aa27.13■■□□□ 1.93
PABPC1-217ENST00000521067 PIP4K2AP48426 406 aaPredicted RBP27.13■■□□□ 1.93
PABPC1-217ENST00000521067 DCTN1Q14203 1278 aa27.13■■□□□ 1.93
PABPC1-217ENST00000521067 PRR5LQ6MZQ0 368 aa27.12■■□□□ 1.93
PABPC1-217ENST00000521067 RRAGCQ9HB90 399 aa27.11■■□□□ 1.93
PABPC1-217ENST00000521067 BRIP1Q9BX63 1249 aa27.1■■□□□ 1.93
PABPC1-217ENST00000521067 SBF1O95248 1867 aa27.09■■□□□ 1.93
PABPC1-217ENST00000521067 APLP1P51693 650 aa27.09■■□□□ 1.93
PABPC1-217ENST00000521067 DNAJC5GQ8N7S2 189 aa27.09■■□□□ 1.93
PABPC1-217ENST00000521067 RBM46Q8TBY0 533 aaKnown RBP27.09■■□□□ 1.93
PABPC1-217ENST00000521067 KDM2BQ8NHM5 1336 aa27.09■■□□□ 1.93
PABPC1-217ENST00000521067 NFKBIEO00221 500 aa27.08■■□□□ 1.93
PABPC1-217ENST00000521067 LMNB1P20700 586 aa27.08■■□□□ 1.93
PABPC1-217ENST00000521067 RTF1Q92541 710 aaKnown RBP27.08■■□□□ 1.93
PABPC1-217ENST00000521067 DZIP3Q86Y13 1208 aaKnown RBP27.07■■□□□ 1.92
PABPC1-217ENST00000521067 ZNF622Q969S3 477 aaKnown RBP eCLIP27.07■■□□□ 1.92
PABPC1-217ENST00000521067 SNRPA1P09661 255 aaKnown RBP27.06■■□□□ 1.92
PABPC1-217ENST00000521067 SETDB2Q96T68 719 aa27.06■■□□□ 1.92
PABPC1-217ENST00000521067 PDE6BP35913 854 aa27.05■■□□□ 1.92
PABPC1-217ENST00000521067 NBPF26B4DH59 902 aa27.04■■□□□ 1.92
PABPC1-217ENST00000521067 HTATSF1O43719 755 aaKnown RBP27.04■■□□□ 1.92
PABPC1-217ENST00000521067 NBPF10Q6P3W6 841 aaKnown RBP27.04■■□□□ 1.92
PABPC1-217ENST00000521067 NPM2Q86SE8 214 aaKnown RBP27.04■■□□□ 1.92
PABPC1-217ENST00000521067 C16orf71Q8IYS4 520 aaPredicted RBP27.04■■□□□ 1.92
PABPC1-217ENST00000521067 NBPF15Q8N660 670 aa27.04■■□□□ 1.92
PABPC1-217ENST00000521067 MIS18AQ9NYP9 233 aa27.04■■□□□ 1.92
PABPC1-217ENST00000521067 ZNF219Q9P2Y4 722 aaPredicted RBP27.04■■□□□ 1.92
PABPC1-217ENST00000521067 SCN7AQ01118 1682 aa27.04■■□□□ 1.92
PABPC1-217ENST00000521067 DLEC1Q9Y238 1755 aa27.04■■□□□ 1.92
PABPC1-217ENST00000521067 C21orf2O43822 256 aa27.03■■□□□ 1.92
PABPC1-217ENST00000521067 ANKRD31Q8N7Z5 1873 aa27.03■■□□□ 1.92
PABPC1-217ENST00000521067 HTRA3P83110 453 aa27.02■■□□□ 1.92
PABPC1-217ENST00000521067 CNBD1Q8NA66 436 aa27.02■■□□□ 1.92
PABPC1-217ENST00000521067 ZC3H4Q9UPT8 1303 aaKnown RBP27.01■■□□□ 1.91
PABPC1-217ENST00000521067 GLTPD2A6NH11 291 aa27.01■■□□□ 1.91
PABPC1-217ENST00000521067 TAF7Q15545 349 aaPredicted RBP27.01■■□□□ 1.91
PABPC1-217ENST00000521067 PDZRN3Q9UPQ7 1066 aa27.01■■□□□ 1.91
PABPC1-217ENST00000521067 FSTL1Q12841 308 aa27■■□□□ 1.91
PABPC1-217ENST00000521067 SRGNP10124 158 aa26.99■■□□□ 1.91
PABPC1-217ENST00000521067 CLEC4GQ6UXB4 293 aa26.99■■□□□ 1.91
PABPC1-217ENST00000521067 PLEKHF1Q96S99 279 aa26.98■■□□□ 1.91
PABPC1-217ENST00000521067 IFFO2Q5TF58 517 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms