RNA–Protein interactions for RNA: ENST00000520997.1

VPS37A-207, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 627 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-207ENST00000520997 SIK1P57059 783 aa9.11□□□□□ -0.95
VPS37A-207ENST00000520997 LINC00116Q8NCU8 138 aa9.11□□□□□ -0.95
VPS37A-207ENST00000520997 EDC4Q6P2E9 1401 aaKnown RBP9.11□□□□□ -0.95
VPS37A-207ENST00000520997 SMG6Q86US8 1419 aaKnown RBP9.11□□□□□ -0.95
VPS37A-207ENST00000520997 COL5A3P25940 1745 aaPredicted RBP9.11□□□□□ -0.95
VPS37A-207ENST00000520997 CD163L1Q9NR16 1453 aa9.1□□□□□ -0.95
VPS37A-207ENST00000520997 MAMSTRQ6ZN01 415 aa9.1□□□□□ -0.95
VPS37A-207ENST00000520997 ZNF831Q5JPB2 1677 aa9.1□□□□□ -0.95
VPS37A-207ENST00000520997 TTLL13PA6NNM8 815 aa9.09□□□□□ -0.95
VPS37A-207ENST00000520997 TATP17735 454 aaPredicted RBP9.09□□□□□ -0.95
VPS37A-207ENST00000520997 LMNB1P20700 586 aa9.09□□□□□ -0.95
VPS37A-207ENST00000520997 KCNA3P22001 575 aa9.09□□□□□ -0.95
VPS37A-207ENST00000520997 HOXC9P31274 260 aa9.09□□□□□ -0.95
VPS37A-207ENST00000520997 RTCBQ9Y3I0 505 aaKnown RBP9.09□□□□□ -0.95
VPS37A-207ENST00000520997 RTL1A6NKG5 1358 aa9.09□□□□□ -0.95
VPS37A-207ENST00000520997 RAB3GAP2Q9H2M9 1393 aa9.09□□□□□ -0.95
VPS37A-207ENST00000520997 HSPA8P11142 646 aaKnown RBP9.08□□□□□ -0.96
VPS37A-207ENST00000520997 AMPHP49418 695 aa9.08□□□□□ -0.96
VPS37A-207ENST00000520997 RASSF7Q02833 373 aa9.08□□□□□ -0.96
VPS37A-207ENST00000520997 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
VPS37A-207ENST00000520997 HDGFL2Q7Z4V5 671 aaPredicted RBP9.08□□□□□ -0.96
VPS37A-207ENST00000520997 WBP1LQ9NX94 342 aa9.08□□□□□ -0.96
VPS37A-207ENST00000520997 MAP3K19Q56UN5 1328 aa9.07□□□□□ -0.96
VPS37A-207ENST00000520997 POTEJP0CG39 1038 aa9.07□□□□□ -0.96
VPS37A-207ENST00000520997 ATP6V1AP38606 617 aa9.07□□□□□ -0.96
VPS37A-207ENST00000520997 USHBP1Q8N6Y0 703 aa9.07□□□□□ -0.96
VPS37A-207ENST00000520997 PIGBQ92521 554 aa9.07□□□□□ -0.96
VPS37A-207ENST00000520997 CFAP44Q96MT7 982 aa9.07□□□□□ -0.96
VPS37A-207ENST00000520997 MYH14Q7Z406 1995 aaKnown RBP9.06□□□□□ -0.96
VPS37A-207ENST00000520997 SCN4AP35499 1836 aa9.06□□□□□ -0.96
VPS37A-207ENST00000520997 AFDNP55196 1824 aaKnown RBP9.06□□□□□ -0.96
VPS37A-207ENST00000520997 GYS1P13807 737 aa9.06□□□□□ -0.96
VPS37A-207ENST00000520997 RFC4P35249 363 aa9.06□□□□□ -0.96
VPS37A-207ENST00000520997 VEGFBP49765 207 aa9.06□□□□□ -0.96
VPS37A-207ENST00000520997 MAP2K1Q02750 393 aaPredicted RBP9.06□□□□□ -0.96
VPS37A-207ENST00000520997 ITPK1Q13572 414 aa9.06□□□□□ -0.96
VPS37A-207ENST00000520997 DPY19L2Q6NUT2 758 aa9.06□□□□□ -0.96
VPS37A-207ENST00000520997 SCUBE2Q9NQ36 999 aa9.06□□□□□ -0.96
VPS37A-207ENST00000520997 THSD7BQ9C0I4 1608 aa9.05□□□□□ -0.96
VPS37A-207ENST00000520997 CYP27B1O15528 508 aa9.05□□□□□ -0.96
VPS37A-207ENST00000520997 CHRNA5P30532 468 aa9.05□□□□□ -0.96
VPS37A-207ENST00000520997 NBPF6Q5VWK0 638 aa9.05□□□□□ -0.96
VPS37A-207ENST00000520997 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
VPS37A-207ENST00000520997 TMC1Q8TDI8 760 aa9.05□□□□□ -0.96
VPS37A-207ENST00000520997 NBPF4Q96M43 638 aa9.05□□□□□ -0.96
VPS37A-207ENST00000520997 TMOD3Q9NYL9 352 aa9.05□□□□□ -0.96
VPS37A-207ENST00000520997 TRIM35Q9UPQ4 493 aa9.05□□□□□ -0.96
VPS37A-207ENST00000520997 FER1L6Q2WGJ9 1857 aa9.04□□□□□ -0.96
VPS37A-207ENST00000520997 POTEFA5A3E0 1075 aa9.04□□□□□ -0.96
VPS37A-207ENST00000520997 TMEM88BA6NKF7 163 aa9.04□□□□□ -0.96
VPS37A-207ENST00000520997 POTECB2RU33 542 aa9.04□□□□□ -0.96
VPS37A-207ENST00000520997 SEC24BO95487 1268 aa9.04□□□□□ -0.96
VPS37A-207ENST00000520997 DCAF8Q5TAQ9 597 aa9.04□□□□□ -0.96
VPS37A-207ENST00000520997 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
VPS37A-207ENST00000520997 COG3Q96JB2 828 aa9.04□□□□□ -0.96
VPS37A-207ENST00000520997 TERF2IPQ9NYB0 399 aa9.04□□□□□ -0.96
VPS37A-207ENST00000520997 CASP8AP2Q9UKL3 1982 aa9.04□□□□□ -0.96
VPS37A-207ENST00000520997 A0A1W2PP64 1363 aa9.03□□□□□ -0.96
VPS37A-207ENST00000520997 KDRP35968 1356 aa9.03□□□□□ -0.96
VPS37A-207ENST00000520997 IER5LQ5T953 404 aa9.03□□□□□ -0.96
VPS37A-207ENST00000520997 BEGAINQ9BUH8 593 aa9.03□□□□□ -0.96
VPS37A-207ENST00000520997 ASAP1Q9ULH1 1129 aa9.03□□□□□ -0.96
VPS37A-207ENST00000520997 PASKQ96RG2 1323 aa9.03□□□□□ -0.96
VPS37A-207ENST00000520997 CNTNAP4Q9C0A0 1308 aa9.03□□□□□ -0.96
VPS37A-207ENST00000520997 CACNA1SQ13698 1873 aa9.02□□□□□ -0.96
VPS37A-207ENST00000520997 VASPP50552 380 aaPredicted RBP9.02□□□□□ -0.97
VPS37A-207ENST00000520997 LDHDQ86WU2 507 aa9.02□□□□□ -0.97
VPS37A-207ENST00000520997 ROCK2O75116 1388 aaKnown RBP9.01□□□□□ -0.97
VPS37A-207ENST00000520997 IQCA1LA6NCM1 817 aa9.01□□□□□ -0.97
VPS37A-207ENST00000520997 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
VPS37A-207ENST00000520997 TMEM106CQ9BVX2 250 aa9.01□□□□□ -0.97
VPS37A-207ENST00000520997 NRXN2Q9P2S2 1712 aa9.01□□□□□ -0.97
VPS37A-207ENST00000520997 LTBP1Q14766 1721 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 RASSF10A6NK89 507 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 NFKBIEO00221 500 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 RPS6KA4O75676 772 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 DDR1Q08345 913 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 NKX1-1Q15270 411 aaPredicted RBP9□□□□□ -0.97
VPS37A-207ENST00000520997 DEFB115Q30KQ5 88 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 ERFEQ4G0M1 354 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 TTLL6Q8N841 843 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 SPG7Q9UQ90 795 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 KIF20BQ96Q89 1820 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 USP42Q9H9J4 1324 aaKnown RBP9□□□□□ -0.97
VPS37A-207ENST00000520997 TRPM7Q96QT4 1865 aa9□□□□□ -0.97
VPS37A-207ENST00000520997 PYGBP11216 843 aa8.99□□□□□ -0.97
VPS37A-207ENST00000520997 PRPF38BQ5VTL8 546 aaKnown RBP8.99□□□□□ -0.97
VPS37A-207ENST00000520997 SLC12A5Q9H2X9 1139 aa8.99□□□□□ -0.97
VPS37A-207ENST00000520997 ATG3Q9NT62 314 aa8.99□□□□□ -0.97
VPS37A-207ENST00000520997 ABT1Q9ULW3 272 aaKnown RBP8.99□□□□□ -0.97
VPS37A-207ENST00000520997 COLQQ9Y215 455 aaPredicted RBP8.99□□□□□ -0.97
VPS37A-207ENST00000520997 ANKRD26Q9UPS8 1709 aa8.99□□□□□ -0.97
VPS37A-207ENST00000520997 WDR33Q9C0J8 1336 aaKnown RBP8.99□□□□□ -0.97
VPS37A-207ENST00000520997 ADAMTSL1Q8N6G6 1762 aa8.99□□□□□ -0.97
VPS37A-207ENST00000520997 INSRP06213 1382 aa8.99□□□□□ -0.97
VPS37A-207ENST00000520997 FLT4P35916 1363 aa8.99□□□□□ -0.97
VPS37A-207ENST00000520997 POLRMTO00411 1230 aaKnown RBP8.98□□□□□ -0.97
VPS37A-207ENST00000520997 FBLN1P23142 703 aa8.98□□□□□ -0.97
VPS37A-207ENST00000520997 RRS1Q15050 365 aaKnown RBP8.98□□□□□ -0.97
VPS37A-207ENST00000520997 SRP68Q9UHB9 627 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms