RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 NEFMP07197 916 aa27.32■■□□□ 1.96
SNHG6-203ENST00000520944 DPEP1P16444 411 aa27.32■■□□□ 1.96
SNHG6-203ENST00000520944 BCS1LQ9Y276 419 aa27.32■■□□□ 1.96
SNHG6-203ENST00000520944 COL15A1P39059 1388 aa27.32■■□□□ 1.96
SNHG6-203ENST00000520944 TM4SF1P30408 202 aa27.31■■□□□ 1.96
SNHG6-203ENST00000520944 DDR1Q08345 913 aa27.31■■□□□ 1.96
SNHG6-203ENST00000520944 HEG1Q9ULI3 1381 aa27.31■■□□□ 1.96
SNHG6-203ENST00000520944 C4AP0C0L4 1744 aa27.3■■□□□ 1.96
SNHG6-203ENST00000520944 A0A087WZG4 1122 aa27.29■■□□□ 1.96
SNHG6-203ENST00000520944 POLRMTO00411 1230 aaKnown RBP27.29■■□□□ 1.96
SNHG6-203ENST00000520944 GIGYF1O75420 1035 aaPredicted RBP27.29■■□□□ 1.96
SNHG6-203ENST00000520944 MCM10Q7L590 875 aa27.29■■□□□ 1.96
SNHG6-203ENST00000520944 VIRMAQ69YN4 1812 aaKnown RBP27.28■■□□□ 1.96
SNHG6-203ENST00000520944 HTATSF1O43719 755 aaKnown RBP27.28■■□□□ 1.96
SNHG6-203ENST00000520944 NPM2Q86SE8 214 aaKnown RBP27.28■■□□□ 1.96
SNHG6-203ENST00000520944 EIF5P55010 431 aaKnown RBP27.27■■□□□ 1.96
SNHG6-203ENST00000520944 PIM2Q9P1W9 311 aa27.26■■□□□ 1.95
SNHG6-203ENST00000520944 ZNF330Q9Y3S2 320 aaPredicted RBP27.26■■□□□ 1.95
SNHG6-203ENST00000520944 KCNQ3O43525 872 aa27.25■■□□□ 1.95
SNHG6-203ENST00000520944 C1QTNF8P60827 252 aa27.25■■□□□ 1.95
SNHG6-203ENST00000520944 NFIXQ14938 502 aa27.25■■□□□ 1.95
SNHG6-203ENST00000520944 KCNA3P22001 575 aa27.24■■□□□ 1.95
SNHG6-203ENST00000520944 ARHGAP27Q6ZUM4 889 aa27.24■■□□□ 1.95
SNHG6-203ENST00000520944 PNNQ9H307 717 aaKnown RBP27.24■■□□□ 1.95
SNHG6-203ENST00000520944 KIF13BQ9NQT8 1826 aa27.24■■□□□ 1.95
SNHG6-203ENST00000520944 ATP10DQ9P241 1426 aa27.24■■□□□ 1.95
SNHG6-203ENST00000520944 UBR2Q8IWV8 1755 aa27.23■■□□□ 1.95
SNHG6-203ENST00000520944 IL6STP40189 918 aaPredicted RBP27.23■■□□□ 1.95
SNHG6-203ENST00000520944 DCTN1Q14203 1278 aa27.23■■□□□ 1.95
SNHG6-203ENST00000520944 DALRD3Q5D0E6 543 aaKnown RBP27.22■■□□□ 1.95
SNHG6-203ENST00000520944 BCL2L12Q9HB09 334 aa27.22■■□□□ 1.95
SNHG6-203ENST00000520944 GPBP1L1Q9HC44 474 aaPredicted RBP27.22■■□□□ 1.95
SNHG6-203ENST00000520944 A1BGP04217 495 aa27.21■■□□□ 1.95
SNHG6-203ENST00000520944 SERPINB2P05120 415 aa27.21■■□□□ 1.95
SNHG6-203ENST00000520944 RALBP1Q15311 655 aa27.21■■□□□ 1.95
SNHG6-203ENST00000520944 SNRPA1P09661 255 aaKnown RBP27.2■■□□□ 1.94
SNHG6-203ENST00000520944 TAF7Q15545 349 aaPredicted RBP27.2■■□□□ 1.94
SNHG6-203ENST00000520944 BICDL1Q6ZP65 573 aa27.2■■□□□ 1.94
SNHG6-203ENST00000520944 TBC1D2BQ9UPU7 963 aa27.2■■□□□ 1.94
SNHG6-203ENST00000520944 CHRNA5P30532 468 aa27.19■■□□□ 1.94
SNHG6-203ENST00000520944 DDX10Q13206 875 aaKnown RBP27.19■■□□□ 1.94
SNHG6-203ENST00000520944 ZNF526Q8TF50 670 aaPredicted RBP27.19■■□□□ 1.94
SNHG6-203ENST00000520944 N4BP2Q86UW6 1770 aaPredicted RBP27.19■■□□□ 1.94
SNHG6-203ENST00000520944 USP16Q9Y5T5 823 aa27.18■■□□□ 1.94
SNHG6-203ENST00000520944 SIPA1L3O60292 1781 aaPredicted RBP27.17■■□□□ 1.94
SNHG6-203ENST00000520944 ADCY9O60503 1353 aa27.17■■□□□ 1.94
SNHG6-203ENST00000520944 MAPK8IP3Q9UPT6 1336 aa27.16■■□□□ 1.94
SNHG6-203ENST00000520944 PLEKHF1Q96S99 279 aa27.16■■□□□ 1.94
SNHG6-203ENST00000520944 KIAA1551Q9HCM1 1747 aa27.16■■□□□ 1.94
SNHG6-203ENST00000520944 TBC1D9BQ66K14 1250 aa27.15■■□□□ 1.94
SNHG6-203ENST00000520944 NFE2L2Q16236 605 aa27.14■■□□□ 1.94
SNHG6-203ENST00000520944 PNISRQ8TF01 805 aaKnown RBP27.14■■□□□ 1.94
SNHG6-203ENST00000520944 PRAMEF22A3QJZ6 481 aa27.13■■□□□ 1.93
SNHG6-203ENST00000520944 DZIP3Q86Y13 1208 aaKnown RBP27.13■■□□□ 1.93
SNHG6-203ENST00000520944 MIS18AQ9NYP9 233 aa27.13■■□□□ 1.93
SNHG6-203ENST00000520944 SENP3-EIF4A1A0A087X0R7 540 aa27.12■■□□□ 1.93
SNHG6-203ENST00000520944 H0YIN7 160 aa27.11■■□□□ 1.93
SNHG6-203ENST00000520944 PIP4K2AP48426 406 aaPredicted RBP27.11■■□□□ 1.93
SNHG6-203ENST00000520944 SETDB2Q96T68 719 aa27.11■■□□□ 1.93
SNHG6-203ENST00000520944 NPHP1O15259 732 aa27.1■■□□□ 1.93
SNHG6-203ENST00000520944 CAMTA2O94983 1202 aa27.1■■□□□ 1.93
SNHG6-203ENST00000520944 C2CD5Q86YS7 1000 aa27.1■■□□□ 1.93
SNHG6-203ENST00000520944 CARMIL3Q8ND23 1372 aa27.09■■□□□ 1.93
SNHG6-203ENST00000520944 C9orf131Q5VYM1 1079 aa27.07■■□□□ 1.92
SNHG6-203ENST00000520944 TTLL6Q8N841 843 aa27.07■■□□□ 1.92
SNHG6-203ENST00000520944 BRIP1Q9BX63 1249 aa27.07■■□□□ 1.92
SNHG6-203ENST00000520944 PDZRN3Q9UPQ7 1066 aa27.07■■□□□ 1.92
SNHG6-203ENST00000520944 ZNF652Q9Y2D9 606 aa27.07■■□□□ 1.92
SNHG6-203ENST00000520944 PDE6BP35913 854 aa27.06■■□□□ 1.92
SNHG6-203ENST00000520944 CLEC4GQ6UXB4 293 aa27.06■■□□□ 1.92
SNHG6-203ENST00000520944 MYBBP1AQ9BQG0 1328 aaKnown RBP27.06■■□□□ 1.92
SNHG6-203ENST00000520944 THUMPD2Q9BTF0 503 aaKnown RBP27.05■■□□□ 1.92
SNHG6-203ENST00000520944 PRR5LQ6MZQ0 368 aa27.04■■□□□ 1.92
SNHG6-203ENST00000520944 CNBD1Q8NA66 436 aa27.04■■□□□ 1.92
SNHG6-203ENST00000520944 NBPF26B4DH59 902 aa27.03■■□□□ 1.92
SNHG6-203ENST00000520944 BRCA1P38398 1863 aaKnown RBP27.03■■□□□ 1.92
SNHG6-203ENST00000520944 RIPK4P57078 832 aa27.03■■□□□ 1.92
SNHG6-203ENST00000520944 ST5P78524 1137 aa27.03■■□□□ 1.92
SNHG6-203ENST00000520944 NBPF10Q6P3W6 841 aaKnown RBP27.03■■□□□ 1.92
SNHG6-203ENST00000520944 CCDC24Q8N4L8 307 aa27.03■■□□□ 1.92
SNHG6-203ENST00000520944 NBPF15Q8N660 670 aa27.03■■□□□ 1.92
SNHG6-203ENST00000520944 AFDNP55196 1824 aaKnown RBP27.02■■□□□ 1.92
SNHG6-203ENST00000520944 NRXN2Q9P2S2 1712 aa27.02■■□□□ 1.92
SNHG6-203ENST00000520944 EIF4A1P60842 406 aaKnown RBP27.02■■□□□ 1.92
SNHG6-203ENST00000520944 ZNF622Q969S3 477 aaKnown RBP eCLIP27.02■■□□□ 1.923e-21■□□□□ 9.3
SNHG6-203ENST00000520944 RNF181Q9P0P0 153 aa27.02■■□□□ 1.92
SNHG6-203ENST00000520944 NBPF5PQ86XG9 351 aaPredicted RBP27■■□□□ 1.91
SNHG6-203ENST00000520944 RGL2O15211 777 aa26.99■■□□□ 1.91
SNHG6-203ENST00000520944 LMOD3Q0VAK6 560 aa26.99■■□□□ 1.91
SNHG6-203ENST00000520944 WDR43Q15061 677 aaKnown RBP eCLIP26.99■■□□□ 1.91
SNHG6-203ENST00000520944 TSPYL4Q9UJ04 414 aa26.99■■□□□ 1.91
SNHG6-203ENST00000520944 ARFGEF1Q9Y6D6 1849 aa26.99■■□□□ 1.91
SNHG6-203ENST00000520944 SCN7AQ01118 1682 aa26.98■■□□□ 1.91
SNHG6-203ENST00000520944 KIF3CO14782 793 aa26.98■■□□□ 1.91
SNHG6-203ENST00000520944 TMPOP42166 694 aaKnown RBP26.97■■□□□ 1.91
SNHG6-203ENST00000520944 NGEFQ8N5V2 710 aa26.97■■□□□ 1.91
SNHG6-203ENST00000520944 NIP7Q9Y221 180 aaKnown RBP eCLIP26.97■■□□□ 1.91
SNHG6-203ENST00000520944 RRP7AQ9Y3A4 280 aaKnown RBP26.97■■□□□ 1.91
SNHG6-203ENST00000520944 CEP350Q5VT06 3117 aa26.97■■□□□ 1.91
SNHG6-203ENST00000520944 TPTE2Q6XPS3 522 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms